Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G025100 Populus trichocarpa HOM05D008140 ORTHO05D009650 7.0e-104 380.6 184 100.0
Potri.008G025200 Populus trichocarpa HOM05D008140 ORTHO05D009650 2.8e-100 368.6 184 97.3
Sabra08G0016900 Salix brachista HOM05D008140 ORTHO05D009650 5.1e-78 294.7 177 81.9
Potri.010G235400 Populus trichocarpa HOM05D008140 ORTHO05D009650 1.6e-71 273.1 178 77.0
Sabra10G0182500 Salix brachista HOM05D008140 ORTHO05D009650 4.6e-71 271.6 180 75.6
Cfa011233 Carpinus fangiana HOM05D008140 ORTHO05D009650 3.7e-36 155.6 181 53.0
QL04p042101 Quercus lobata HOM05D008140 ORTHO05D009650 3.0e-30 136.0 172 46.5
CiPaw.13G036800 Carya illinoinensis HOM05D008140 ORTHO05D009650 4.3e-29 132.1 160 51.9
Duzib106G0172 Durio zibethinus HOM05D008140 ORTHO05D009650 2.4e-27 126.3 156 45.5
Prupe.2G086100 Prunus persica HOM05D008140 ORTHO05D009650 9.0e-27 124.4 164 48.8
Cfa011234 Carpinus fangiana HOM05D008140 ORTHO05D009650 1.5e-26 123.6 188 42.0
MD07G1068400 Malus domestica HOM05D008140 ORTHO05D009650 1.5e-26 123.6 166 48.2
COL.COLO4_06812 Corchorus olitorius HOM05D008140 ORTHO05D009650 3.4e-26 122.5 180 46.1
Haze_02596 Corylus avellana HOM05D008140 ORTHO05D009650 1.0e-25 120.9 167 46.7
QL04p041480 Quercus lobata HOM05D008140 ORTHO05D009650 1.7e-25 120.2 165 44.2
FAN01G1993 Fragaria x ananassa HOM05D008140 ORTHO05D009650 2.9e-25 119.4 148 45.9
FAN03G1479 Fragaria x ananassa HOM05D008140 ORTHO05D009650 8.5e-25 117.9 149 45.6
FvH4_7g05940 Fragaria vesca HOM05D008140 ORTHO05D009650 2.5e-24 116.3 149 45.6
FAN06G2722 Fragaria x ananassa HOM05D008140 ORTHO05D009650 2.5e-24 116.3 149 45.6
RcHm_v2.0_Chr1g0333151 Rosa chinensis HOM05D008140 ORTHO05D009650 4.2e-24 115.5 166 46.4
FAN10G4346 Fragaria x ananassa HOM05D008140 ORTHO05D009650 1.2e-23 114.0 149 45.6
RcHm_v2.0_Chr1g0333141 Rosa chinensis HOM05D008140 ORTHO05D009650 1.2e-23 114.0 166 45.2
QL04p041665 Quercus lobata HOM05D008140 ORTHO05D009650 4.6e-23 112.1 159 44.0
TWI38G0562 Tripterygium wilfordii HOM05D008140 ORTHO05D009650 1.0e-22 110.9 166 44.0
Thecc.10G110900 Theobroma cacao HOM05D008140 ORTHO05D009650 1.1e-21 107.5 167 41.3
Manes.07G090200 Manihot esculenta HOM05D008140 ORTHO05D009650 2.0e-21 106.7 115 55.7
Ciclev10033301m.g Citrus clementina HOM05D008140 ORTHO05D009650 2.8e-20 102.8 157 42.0
Haze_02595 Corylus avellana HOM05D008140 ORTHO05D009650 1.5e-18 97.1 166 39.8
Cfa011231 Carpinus fangiana HOM05D008140 ORTHO05D009650 2.9e-17 92.8 133 45.9
Haze_02597 Corylus avellana HOM05D008140 ORTHO05D009650 1.4e-16 90.5 132 44.7
CiPaw.13G036700 Carya illinoinensis HOM05D008140 ORTHO05D009650 5.5e-16 88.6 183 39.9
QL04p041477 Quercus lobata HOM05D008140 ORTHO05D009650 7.2e-16 88.2 154 40.9
Lalb_Chr06g0170171 Lupinus albus HOM05D008140 ORTHO05D009650 1.6e-15 87.0 128 40.6
CiPaw.13G036900 Carya illinoinensis HOM05D008140 ORTHO05D009650 1.0e-14 84.3 171 39.2
AT2G38790 Arabidopsis thaliana HOM05D008140 ORTHO05D009650 5.1e-14 82.0 146 38.4
AL4G36090 Arabidopsis lyrata HOM05D008140 ORTHO05D009650 6.7e-14 81.6 149 36.2
CARHR133500 Cardamine hirsuta HOM05D008140 ORTHO05D009650 6.7e-14 81.6 159 35.8
Carub.0004s2081 Capsella rubella HOM05D008140 ORTHO05D009650 1.1e-13 80.9 148 37.2
CiPaw.14G029100 Carya illinoinensis HOM05D008140 ORTHO05D009650 1.5e-13 80.5 174 35.1
THA.LOC104803183 Tarenaya hassleriana HOM05D008140 ORTHO05D009650 2.6e-13 79.7 104 49.0
A03p21600 Brassica napus HOM05D008140 ORTHO05D009650 7.4e-13 78.2 167 36.5
BolC4t22473H Brassica oleracea HOM05D008140 ORTHO05D009650 7.4e-13 78.2 168 36.3
BraA03t11396Z Brassica rapa HOM05D008140 ORTHO05D009650 7.4e-13 78.2 167 36.5
Rhsim03G0105800 Rhododendron simsii HOM05D008140 ORTHO05D009650 1.7e-12 77.0 111 44.1
BcaC02g12023 Brassica carinata HOM05D008140 ORTHO05D009650 2.2e-12 76.6 165 36.4
Nitab4.5_0001850g0010 Nicotiana tabacum HOM05D009634 ORTHO05D009650 2.2e-12 76.6 123 42.3
C04p08800 Brassica napus HOM05D008140 ORTHO05D009650 2.8e-12 76.3 165 36.4
TAR636G0417 Trochodendron aralioides HOM05D008140 ORTHO05D009650 2.8e-12 76.3 121 43.0
A05p07360 Brassica napus HOM05D008140 ORTHO05D009650 4.8e-12 75.5 165 36.4
BraA05t19701Z Brassica rapa HOM05D008140 ORTHO05D009650 4.8e-12 75.5 165 36.4
A05p07380 Brassica napus HOM05D008140 ORTHO05D009650 6.3e-12 75.1 165 36.4
BraA05t19703Z Brassica rapa HOM05D008140 ORTHO05D009650 6.3e-12 75.1 165 36.4
Sp4g21180 Schrenkiella parvula HOM05D008140 ORTHO05D009650 8.2e-12 74.7 153 34.6
C03p25590 Brassica napus HOM05D008140 ORTHO05D009650 1.4e-11 73.9 152 35.5
BolC3t14947H Brassica oleracea HOM05D008140 ORTHO05D009650 1.4e-11 73.9 152 35.5
THA.LOC104803169 Tarenaya hassleriana HOM05D008140 ORTHO05D009650 1.4e-11 73.9 162 35.2
CANSAT56G1901 Cannabis sativa HOM05D008140 ORTHO05D009650 1.8e-11 73.6 141 36.9
BcaB02g09155 Brassica carinata HOM05D008140 ORTHO05D009650 2.4e-11 73.2 164 34.8
BcaB02g09156 Brassica carinata HOM05D008140 ORTHO05D009650 2.4e-11 73.2 164 34.8
Peaxi162Scf00244g00074 Petunia axillaris HOM05D009634 ORTHO05D009650 2.4e-11 73.2 96 43.8
Cfa011235 Carpinus fangiana HOM05D008140 ORTHO05D009650 3.1e-11 72.8 103 43.7
Oeu026565.1 Olea europaea HOM05D009634 ORTHO05D009650 3.1e-11 72.8 111 40.5
Nitab4.5_0002878g0010 Nicotiana tabacum HOM05D009634 ORTHO05D009650 2.6e-10 69.7 103 41.7
Oeu059859.1 Olea europaea HOM05D009634 ORTHO05D009650 1.3e-09 67.4 111 38.7
PGSC0003DMG400027311 Solanum tuberosum HOM05D009634 ORTHO05D009650 1.1e-08 64.3 104 38.5
Nitab4.5_0012334g0020 Nicotiana tabacum HOM05D009634 ORTHO05D009650 2.5e-08 63.2 99 40.4
Solyc11g007520.1 Solanum lycopersicum HOM05D009634 ORTHO05D009650 2.5e-08 63.2 106 37.7
Aqoxy2G01366 Aquilegia oxysepala HOM05D008140 ORTHO05D009650 3.2e-08 62.8 121 33.9
Sopen11g003360 Solanum pennellii HOM05D009634 ORTHO05D009650 3.2e-08 62.8 106 37.7
Peaxi162Scf00244g00075 Petunia axillaris HOM05D009634 ORTHO05D009650 5.5e-08 62.0 153 32.7
Nitab4.5_0002878g0050 Nicotiana tabacum HOM05D009634 ORTHO05D009650 3.6e-07 59.3 98 35.7
Nitab4.5_0002878g0060 Nicotiana tabacum HOM05D009634 ORTHO05D009650 6.1e-07 58.5 98 36.7
Cpa.g.sc19.24 Carica papaya HOM05D008140 ORTHO05D009650 3.0e-06 56.2 151 33.1
C03p25610 Brassica napus HOM05D008140 ORTHO05D009650 5.2e-06 55.5 97 40.2
BolC3t14949H Brassica oleracea HOM05D008140 ORTHO05D009650 5.2e-06 55.5 97 40.2
AL4G20280 Arabidopsis lyrata HOM05D008140 ORTHO05D009650 6.7e-06 55.1 76 43.4
A03p21630 Brassica napus HOM05D008140 ORTHO05D009650 6.7e-06 55.1 91 40.7
BraA03t11398Z Brassica rapa HOM05D008140 ORTHO05D009650 6.7e-06 55.1 91 40.7


User provided reference genes

Program Settings