Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G084750 Populus trichocarpa HOM05D006414 ORTHO05D007780 7.5e-61 236.9 110 100.0
Potri.005G082400 Populus trichocarpa HOM05D006414 ORTHO05D007780 1.1e-30 136.7 75 85.3
Sabra05G0067400 Salix brachista HOM05D006414 ORTHO05D007780 5.2e-30 134.4 75 82.7
FAN07G2537 Fragaria x ananassa HOM05D006414 ORTHO05D007780 1.5e-29 132.9 87 74.7
FAN12G1220 Fragaria x ananassa HOM05D006414 ORTHO05D007780 1.5e-29 132.9 87 74.7
FAN12G2815 Fragaria x ananassa HOM05D006414 ORTHO05D007780 1.5e-29 132.9 87 74.7
Glyma.05G182700 Glycine max HOM05D006414 ORTHO05D007780 4.4e-29 131.3 105 66.7
ATR0681G202 Amborella trichopoda HOM05D006414 ORTHO05D007780 5.8e-29 131.0 75 82.7
Phvul.002G263600 Phaseolus vulgaris HOM05D006414 ORTHO05D007780 7.5e-29 130.6 105 63.8
HanXRQChr07g0202341 Helianthus annuus HOM05D006414 ORTHO05D007780 9.9e-29 130.2 75 81.3
arahy.Tifrunner.gnm1.ann1.N3YXA0 Arachis hypogaea HOM05D006414 ORTHO05D007780 1.3e-28 129.8 75 80.0
PGR004G0335 Punica granatum HOM05D006414 ORTHO05D007780 1.3e-28 129.8 74 82.4
HPP92_016845 Vanilla planifolia HOM05D006414 ORTHO05D007780 1.3e-28 129.8 107 61.7
arahy.Tifrunner.gnm1.ann1.S4ITMM Arachis hypogaea HOM05D006414 ORTHO05D007780 1.7e-28 129.4 75 80.0
MSTRG.2541 Avicennia marina HOM05D006414 ORTHO05D007780 1.7e-28 129.4 75 80.0
Lsat_1_v5_gn_2_117881 Lactuca sativa HOM05D006414 ORTHO05D007780 1.7e-28 129.4 75 81.3
FvH4_4g12030 Fragaria vesca HOM05D006414 ORTHO05D007780 2.2e-28 129.0 81 76.5
SGA_v2.0_scaffold2G01307 Striga asiatica HOM05D006414 ORTHO05D007780 2.2e-28 129.0 79 75.9
Lj2A560T64 Lonicera japonica HOM05D006414 ORTHO05D007780 2.9e-28 128.6 75 80.0
Actinidia16042 Actinidia chinensis HOM05D006414 ORTHO05D007780 3.7e-28 128.3 79 73.4
arahy.Tifrunner.gnm1.ann1.F90T56 Arachis hypogaea HOM05D006414 ORTHO05D007780 3.7e-28 128.3 75 78.7
AUR62003321 Chenopodium quinoa HOM05D006414 ORTHO05D007780 3.7e-28 128.3 75 80.0
AUR62016261 Chenopodium quinoa HOM05D006414 ORTHO05D007780 3.7e-28 128.3 75 80.0
AUR62043752 Chenopodium quinoa HOM05D006414 ORTHO05D007780 3.7e-28 128.3 75 80.0
ECA238G3570 Erigeron canadensis HOM05D006414 ORTHO05D007780 3.7e-28 128.3 75 80.0
Migut.H02413 Erythranthe guttata HOM05D006414 ORTHO05D007780 3.7e-28 128.3 75 78.7
Oeu028531.1 Olea europaea HOM05D006414 ORTHO05D007780 3.7e-28 128.3 75 78.7
GSVIVG01022204001 Vitis vinifera HOM05D006414 ORTHO05D007780 3.7e-28 128.3 105 66.7
CSS0011059 Camellia sinensis var. sinensis HOM05D006414 ORTHO05D007780 4.9e-28 127.9 75 78.7
CSS0026013 Camellia sinensis var. sinensis HOM05D006414 ORTHO05D007780 4.9e-28 127.9 75 78.7
Cc07_g15860 Coffea canephora HOM05D006414 ORTHO05D007780 4.9e-28 127.9 75 78.7
Eucgr.I00342 Eucalyptus grandis HOM05D006414 ORTHO05D007780 4.9e-28 127.9 105 66.7
Eucgr.L02634 Eucalyptus grandis HOM05D006414 ORTHO05D007780 4.9e-28 127.9 105 66.7
TAR376G1012 Trochodendron aralioides HOM05D006414 ORTHO05D007780 4.9e-28 127.9 75 78.7
Aqoxy5G00981 Aquilegia oxysepala HOM05D006414 ORTHO05D007780 6.4e-28 127.5 89 69.7
CiPaw.04G093800 Carya illinoinensis HOM05D006414 ORTHO05D007780 6.4e-28 127.5 75 80.0
ClCG01G019140 Citrullus lanatus HOM05D006414 ORTHO05D007780 6.4e-28 127.5 75 78.7
MELO3C007791.2 Cucumis melo HOM05D006414 ORTHO05D007780 6.4e-28 127.5 75 78.7
CsaV3_6G045830 Cucumis sativus L. HOM05D006414 ORTHO05D007780 6.4e-28 127.5 75 78.7
TWI74G0679 Tripterygium wilfordii HOM05D006414 ORTHO05D007780 6.4e-28 127.5 75 78.7
Aa31LG6G15650 Aethionema arabicum HOM05D006414 ORTHO05D007780 8.3e-28 127.1 75 77.3
Aqoxy6G00504 Aquilegia oxysepala HOM05D006414 ORTHO05D007780 8.3e-28 127.1 75 78.7
EL10Ac6g14730 Beta vulgaris HOM05D006414 ORTHO05D007780 8.3e-28 127.1 75 78.7
vmacro18623 Vaccinium macrocarpon HOM05D006414 ORTHO05D007780 1.1e-27 126.7 75 77.3
Ah.03g149270 Amaranthus hybridus HOM05D006414 ORTHO05D007780 1.4e-27 126.3 75 77.3
arahy.Tifrunner.gnm1.ann1.BPVH0U Arachis hypogaea HOM05D006414 ORTHO05D007780 1.4e-27 126.3 75 77.3
CAN.G382.6 Capsicum annuum HOM05D006414 ORTHO05D007780 1.4e-27 126.3 75 77.3
COL.COLO4_11035 Corchorus olitorius HOM05D006414 ORTHO05D007780 1.4e-27 126.3 81 74.1
SalBow6G2882 Salvia bowleyana HOM05D006414 ORTHO05D007780 1.4e-27 126.3 75 77.3
SalBow6G5148 Salvia bowleyana HOM05D006414 ORTHO05D007780 1.4e-27 126.3 75 77.3
SalBow6G7209 Salvia bowleyana HOM05D006414 ORTHO05D007780 1.4e-27 126.3 75 77.3
SalBow8G0663 Salvia bowleyana HOM05D000608 ORTHO05D007780 1.4e-27 126.3 75 77.3
SalBow8G2565 Salvia bowleyana HOM05D000608 ORTHO05D007780 1.4e-27 126.3 75 77.3
Solyc04g054270.4 Solanum lycopersicum HOM05D006414 ORTHO05D007780 1.4e-27 126.3 75 77.3
Sopen04g023860 Solanum pennellii HOM05D006414 ORTHO05D007780 1.4e-27 126.3 75 77.3
PGSC0003DMG400012802 Solanum tuberosum HOM05D006414 ORTHO05D007780 1.4e-27 126.3 75 77.3
Prupe.4G236100 Prunus persica HOM05D006414 ORTHO05D007780 1.9e-27 125.9 75 80.0
QL06p032569 Quercus lobata HOM05D006414 ORTHO05D007780 1.9e-27 125.9 75 80.0
Thecc.01G110400 Theobroma cacao HOM05D006414 ORTHO05D007780 1.9e-27 125.9 75 77.3
Glyma.08G140300 Glycine max HOM05D006414 ORTHO05D007780 2.4e-27 125.6 105 64.8
Lalb_Chr07g0184891 Lupinus albus HOM05D006414 ORTHO05D007780 2.4e-27 125.6 75 77.3
MD11G1203200 Malus domestica HOM05D006414 ORTHO05D007780 2.4e-27 125.6 84 72.6
Rhsim05G0180100 Rhododendron simsii HOM05D006414 ORTHO05D007780 2.4e-27 125.6 75 76.0
THA.LOC104807720 Tarenaya hassleriana HOM05D006414 ORTHO05D007780 2.4e-27 125.6 75 77.3
Lj4g0018166 Lotus japonicus HOM05D006414 ORTHO05D007780 3.2e-27 125.2 105 62.9
unitig_28.g29440 Utricularia gibba HOM05D006414 ORTHO05D007780 3.2e-27 125.2 105 64.8
Dinv19510 Davidia involucrata HOM05D006414 ORTHO05D007780 4.1e-27 124.8 75 77.3
Duzib147G0014 Durio zibethinus HOM05D006414 ORTHO05D007780 4.1e-27 124.8 75 77.3
MD03G1187700 Malus domestica HOM05D006414 ORTHO05D007780 4.1e-27 124.8 75 78.7
RcHm_v2.0_Chr4g0409671 Rosa chinensis HOM05D006414 ORTHO05D007780 4.1e-27 124.8 81 74.1
Sed0012904 Sechium edule HOM05D006414 ORTHO05D007780 4.1e-27 124.8 75 77.3
BcaNung00882 Brassica carinata HOM05D006414 ORTHO05D007780 5.4e-27 124.4 75 76.0
BcaNung06694 Brassica carinata HOM05D006414 ORTHO05D007780 5.4e-27 124.4 75 76.0
A01p00510 Brassica napus HOM05D006414 ORTHO05D007780 5.4e-27 124.4 75 76.0
C01p00660 Brassica napus HOM05D006414 ORTHO05D007780 5.4e-27 124.4 75 76.0
Carub.0007s0149 Capsella rubella HOM05D006414 ORTHO05D007780 5.4e-27 124.4 75 76.0
Haze_14271 Corylus avellana HOM05D006414 ORTHO05D007780 5.4e-27 124.4 79 73.4
Thhalv10024997m.g Eutrema salsugineum HOM05D006414 ORTHO05D007780 5.4e-27 124.4 75 76.0
Gohir.D10G102200 Gossypium hirsutum HOM05D006414 ORTHO05D007780 5.4e-27 124.4 75 76.0
Gorai.011G111900 Gossypium raimondii HOM05D006414 ORTHO05D007780 5.4e-27 124.4 75 76.0
Nn1g05205 Nelumbo nucifera HOM05D006414 ORTHO05D007780 5.4e-27 124.4 71 81.7
Nitab4.5_0000156g0020 Nicotiana tabacum HOM05D006414 ORTHO05D007780 5.4e-27 124.4 75 76.0
Peaxi162Scf01651g00012 Petunia axillaris HOM05D006414 ORTHO05D007780 5.4e-27 124.4 75 76.0
BraA01t00058Z Brassica rapa HOM05D006414 ORTHO05D007780 7.1e-27 124.0 83 72.3
Atru.chr4.307 Acer truncatum HOM05D006414 ORTHO05D007780 1.2e-26 123.2 75 76.0
PSO215G0001 Papaver somniferum HOM05D006414 ORTHO05D007780 1.2e-26 123.2 70 84.3
Sp7g36270 Schrenkiella parvula HOM05D006414 ORTHO05D007780 1.2e-26 123.2 75 74.7
Gohir.A10G086500 Gossypium hirsutum HOM05D006414 ORTHO05D007780 1.6e-26 122.9 75 74.7
AL7G11770 Arabidopsis lyrata HOM05D006414 ORTHO05D007780 2.1e-26 122.5 75 74.7
AT4G39620 Arabidopsis thaliana HOM05D006414 ORTHO05D007780 2.1e-26 122.5 75 74.7
CARHR247110 Cardamine hirsuta HOM05D006414 ORTHO05D007780 2.1e-26 122.5 75 74.7
CDE10G0169 Ceratophyllum demersum HOM05D006414 ORTHO05D007780 2.1e-26 122.5 105 61.0
FAN17G1880 Fragaria x ananassa HOM05D006414 ORTHO05D007780 2.7e-26 122.1 78 75.6
Medtr8g091670 Medicago truncatula HOM05D006414 ORTHO05D007780 3.5e-26 121.7 105 61.0
Rhsim08G0008000 Rhododendron simsii HOM05D006414 ORTHO05D007780 3.5e-26 121.7 71 78.9
DCAR_000987 Daucus carota HOM05D006414 ORTHO05D007780 4.6e-26 121.3 75 73.3
Psat7g051760 Pisum sativum HOM05D006414 ORTHO05D007780 4.6e-26 121.3 105 60.0
Sc03g0004230 Simmondsia chinensis HOM05D006414 ORTHO05D007780 4.6e-26 121.3 75 74.7
Ciclev10025440m.g Citrus clementina HOM05D006414 ORTHO05D007780 6.0e-26 120.9 75 73.3
Zm00001eb194340 Zea mays HOM05D006414 ORTHO05D007780 6.0e-26 120.9 75 74.7
TPR.G2171 Trifolium pratense HOM05D006414 ORTHO05D007780 1.7e-25 119.4 105 60.0
Nitab4.5_0002133g0010 Nicotiana tabacum HOM05D006414 ORTHO05D007780 3.9e-25 118.2 71 76.1
Ca_17703_v3 Cicer arietinum L. HOM05D006414 ORTHO05D007780 5.1e-25 117.9 105 59.0
VMungo0251G3283 Vigna mungo HOM05D006414 ORTHO05D007780 5.1e-25 117.9 69 79.7
Cpa.g.sc2736.1 Carica papaya HOM05D006414 ORTHO05D007780 1.1e-24 116.7 75 74.7
CDE10G1362 Ceratophyllum demersum HOM05D006414 ORTHO05D007780 1.9e-24 115.9 73 74.0
Manes.12G140500 Manihot esculenta HOM05D006414 ORTHO05D007780 3.3e-24 115.2 69 79.7
SEGI_05645 Sequoiadendron giganteum HOM05D006414 ORTHO05D007780 8.1e-23 110.5 77 64.9
Mapoly0079s0007 Marchantia polymorpha HOM05D006414 ORTHO05D007780 1.0e-17 93.6 69 58.0
AagrBONN_evm.TU.Sc2ySwM_117.627 Anthoceros agrestis HOM05D006414 ORTHO05D007780 1.9e-16 89.4 75 54.7
Pp3c8_4580 Physcomitrium patens HOM05D006414 ORTHO05D007780 4.3e-16 88.2 71 54.9
Pp3c4_9690 Physcomitrium patens HOM05D006414 ORTHO05D007780 6.2e-15 84.3 69 55.1
AagrBONN_evm.TU.Sc2ySwM_344.419 Anthoceros agrestis HOM05D006414 ORTHO05D007780 4.0e-14 81.6 79 46.8
unitig_27.g25358 Utricularia gibba HOM05D006414 ORTHO05D007780 4.0e-14 81.6 48 77.1
Actinidia20120 Actinidia chinensis HOM05D006414 ORTHO05D007780 2.9e-12 75.5 41 82.9
CBR_g49306 Chara braunii HOM05D005862 ORTHO05D007780 1.1e-06 57.0 69 39.1
Hma1.2p1_0151F.1_g067100 Hydrangea macrophylla HOM05D006464 ORTHO05D007923 5.3e-06 54.7 85 29.4
SMO223G0013 Selaginella moellendorffii HOM05D006414 ORTHO05D007780 5.3e-06 54.7 89 34.8


User provided reference genes

Program Settings