Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G277400 Populus trichocarpa HOM05D003999 ORTHO05D005219 2.0e-244 848.6 409 100.0
Sabra06G0215100 Salix brachista HOM05D003999 ORTHO05D005219 8.0e-209 730.3 445 80.2
Ciclev10008331m.g Citrus clementina HOM05D003999 ORTHO05D005219 5.9e-103 378.6 435 48.7
Haze_18974 Corylus avellana HOM05D003999 ORTHO05D005219 6.6e-94 348.6 480 41.0
Haze_18980 Corylus avellana HOM05D003999 ORTHO05D005219 9.8e-90 334.7 500 39.2
Atru.chr7.2670 Acer truncatum HOM05D003999 ORTHO05D005219 8.3e-89 331.6 412 47.1
Nn8g40781 Nelumbo nucifera HOM05D003999 ORTHO05D005219 1.2e-79 301.2 345 46.1
Thecc.09G004800 Theobroma cacao HOM05D003999 ORTHO05D005219 1.6e-79 300.8 275 54.9
TAR625G1146 Trochodendron aralioides HOM05D003999 ORTHO05D005219 3.9e-78 296.2 288 50.3
TAR626G1281 Trochodendron aralioides HOM05D003999 ORTHO05D005219 5.6e-77 292.4 301 48.5
Cfa013453 Carpinus fangiana HOM05D003999 ORTHO05D005219 1.2e-74 284.6 314 45.2
CiPaw.15G150400 Carya illinoinensis HOM05D003999 ORTHO05D005219 2.9e-73 280.0 419 39.1
Dinv41175 Davidia involucrata HOM05D003999 ORTHO05D005219 1.9e-72 277.3 320 44.7
Cfa020676 Carpinus fangiana HOM05D003999 ORTHO05D005219 4.6e-71 272.7 461 36.7
Manes.06G019800 Manihot esculenta HOM05D003999 ORTHO05D005219 1.1e-69 268.1 316 43.0
Aqoxy7G02806 Aquilegia oxysepala HOM05D003999 ORTHO05D005219 1.5e-69 267.7 313 44.7
Atru.chr7.755 Acer truncatum HOM05D003999 ORTHO05D005219 4.3e-69 266.2 325 42.2
Atru.chr7.776 Acer truncatum HOM05D003999 ORTHO05D005219 4.3e-69 266.2 325 42.2
Sed0015737 Sechium edule HOM05D003999 ORTHO05D005219 4.3e-69 266.2 310 43.9
Rhsim03G0266100 Rhododendron simsii HOM05D003999 ORTHO05D005219 5.6e-69 265.8 317 43.8
Sc08g0004740 Simmondsia chinensis HOM05D003999 ORTHO05D005219 5.6e-69 265.8 281 45.6
vmacro05997 Vaccinium macrocarpon HOM05D003999 ORTHO05D005219 9.5e-69 265.0 315 43.5
MD13G1241700 Malus domestica HOM05D003999 ORTHO05D005219 1.4e-67 261.2 345 42.6
Sed0001699 Sechium edule HOM05D003999 ORTHO05D005219 1.8e-67 260.8 328 41.2
Prupe.1G075400 Prunus persica HOM05D003999 ORTHO05D005219 6.8e-67 258.8 311 43.4
Ciclev10010423m.g Citrus clementina HOM05D003999 ORTHO05D005219 2.0e-66 257.3 421 35.4
Actinidia29951 Actinidia chinensis HOM05D003999 ORTHO05D005219 2.6e-66 256.9 302 43.4
Actinidia38494 Actinidia chinensis HOM05D003999 ORTHO05D005219 3.4e-66 256.5 347 40.6
Hma1.2p1_1326F.1_g275830 Hydrangea macrophylla HOM05D003999 ORTHO05D005219 4.4e-66 256.1 305 43.0
CiPaw.07G197100 Carya illinoinensis HOM05D003999 ORTHO05D005219 7.6e-66 255.4 318 41.8
Duzib114G0910 Durio zibethinus HOM05D003999 ORTHO05D005219 1.3e-65 254.6 337 40.4
TAR383G0399 Trochodendron aralioides HOM05D003999 ORTHO05D005219 1.3e-65 254.6 337 42.7
Glyma.06G001400 Glycine max HOM05D003999 ORTHO05D005219 6.4e-65 252.3 340 41.2
Psat5g048320 Pisum sativum HOM05D003999 ORTHO05D005219 1.1e-64 251.5 316 40.8
CsaV3_1G031880 Cucumis sativus L. HOM05D003999 ORTHO05D005219 1.9e-64 250.8 283 43.8
Lj1g0014223 Lotus japonicus HOM05D003999 ORTHO05D005219 1.9e-64 250.8 315 42.9
Duzib106G1697 Durio zibethinus HOM05D003999 ORTHO05D005219 3.2e-64 250.0 372 38.7
MELO3C017428.2 Cucumis melo HOM05D003999 ORTHO05D005219 9.2e-64 248.4 282 44.0
COL.COLO4_08503 Corchorus olitorius HOM05D003999 ORTHO05D005219 1.6e-63 247.7 330 41.8
Glyma.04G001900 Glycine max HOM05D003999 ORTHO05D005219 2.1e-63 247.3 285 43.5
Thecc.10G174600 Theobroma cacao HOM05D003999 ORTHO05D005219 3.5e-63 246.5 283 44.5
MSTRG.26544 Avicennia marina HOM05D003999 ORTHO05D005219 6.0e-63 245.7 385 33.8
Medtr3g100350 Medicago truncatula HOM05D003999 ORTHO05D005219 1.3e-62 244.6 278 45.0
RcHm_v2.0_Chr7g0219501 Rosa chinensis HOM05D003999 ORTHO05D005219 1.3e-62 244.6 325 40.6
FAN04G0885 Fragaria x ananassa HOM05D003999 ORTHO05D005219 1.7e-62 244.2 324 42.0
AUR62027455 Chenopodium quinoa HOM05D003999 ORTHO05D005219 1.1e-61 241.5 315 40.6
Ca_15280_v3 Cicer arietinum L. HOM05D003999 ORTHO05D005219 1.1e-61 241.5 314 40.4
FAN18G4269 Fragaria x ananassa HOM05D003999 ORTHO05D005219 1.1e-61 241.5 319 41.4
EL10Ac8g19270 Beta vulgaris HOM05D003999 ORTHO05D005219 1.5e-61 241.1 318 41.8
Hund06701 Selenicereus undatus HOM05D003999 ORTHO05D005219 2.5e-61 240.4 327 39.8
Cc06_g20850 Coffea canephora HOM05D003999 ORTHO05D005219 3.3e-61 240.0 315 40.3
Sopen02g019140 Solanum pennellii HOM05D003999 ORTHO05D005219 3.3e-61 240.0 310 39.4
TPR.G6349 Trifolium pratense HOM05D003999 ORTHO05D005219 4.3e-61 239.6 284 41.5
Potri.018G142300 Populus trichocarpa HOM05D003999 ORTHO05D005219 7.3e-61 238.8 417 33.3
Eucgr.C02221 Eucalyptus grandis HOM05D003999 ORTHO05D005219 9.6e-61 238.4 303 41.9
arahy.Tifrunner.gnm1.ann1.K74ZDU Arachis hypogaea HOM05D003999 ORTHO05D005219 1.6e-60 237.7 337 40.1
Phvul.009G117100 Phaseolus vulgaris HOM05D003999 ORTHO05D005219 2.1e-60 237.3 337 40.7
AUR62031249 Chenopodium quinoa HOM05D003999 ORTHO05D005219 3.6e-60 236.5 326 38.7
Lalb_Chr11g0061221 Lupinus albus HOM05D003999 ORTHO05D005219 1.1e-59 235.0 284 41.2
Peaxi162Scf00670g00347 Petunia axillaris HOM05D003999 ORTHO05D005219 1.4e-59 234.6 278 40.6
FAN13G0316 Fragaria x ananassa HOM05D003999 ORTHO05D005219 1.8e-59 234.2 324 41.0
TWI34G1954 Tripterygium wilfordii HOM05D003999 ORTHO05D005219 2.4e-59 233.8 317 40.4
Gorai.011G210800 Gossypium raimondii HOM05D003999 ORTHO05D005219 4.0e-59 233.0 302 41.1
Gohir.D06G185700 Gossypium hirsutum HOM05D003999 ORTHO05D005219 5.2e-59 232.6 314 39.8
MD16G1248600 Malus domestica HOM05D003999 ORTHO05D005219 5.2e-59 232.6 308 42.9
Potri.006G075400 Populus trichocarpa HOM05D003999 ORTHO05D005219 6.8e-59 232.3 327 37.6
VMungo1309G0585 Vigna mungo HOM05D003999 ORTHO05D005219 6.8e-59 232.3 334 40.1
Gorai.010G217300 Gossypium raimondii HOM05D003999 ORTHO05D005219 1.5e-58 231.1 314 39.8
Gohir.A06G176100 Gossypium hirsutum HOM05D003999 ORTHO05D005219 2.6e-58 230.3 316 39.9
Migut.L01882 Erythranthe guttata HOM05D003999 ORTHO05D005219 3.4e-58 229.9 359 36.8
Gohir.D10G188000 Gossypium hirsutum HOM05D003999 ORTHO05D005219 3.4e-58 229.9 315 40.0
ECA240G0372 Erigeron canadensis HOM05D003999 ORTHO05D005219 5.8e-58 229.2 321 39.6
Sabra06G0056300 Salix brachista HOM05D003999 ORTHO05D005219 7.6e-58 228.8 304 39.5
TWI63G1413 Tripterygium wilfordii HOM05D003999 ORTHO05D005219 1.3e-57 228.0 285 42.8
MBI16_g05835_MAGBIO Magnolia biondii HOM05D003999 ORTHO05D005219 6.4e-57 225.7 286 44.4
HanXRQChr09g0244721 Helianthus annuus HOM05D003999 ORTHO05D005219 8.4e-57 225.3 303 39.9
Sabra18G0116200 Salix brachista HOM05D003999 ORTHO05D005219 8.4e-57 225.3 331 38.7
SGA_v2.0_scaffold231G43410 Striga asiatica HOM05D003999 ORTHO05D005219 1.1e-56 224.9 320 36.9
Gohir.A10G181100 Gossypium hirsutum HOM05D003999 ORTHO05D005219 3.2e-56 223.4 283 42.0
THA.LOC104814650 Tarenaya hassleriana HOM05D003999 ORTHO05D005219 3.2e-56 223.4 277 41.2
arahy.Tifrunner.gnm1.ann1.M9AABA Arachis hypogaea HOM05D003999 ORTHO05D005219 4.2e-56 223.0 346 38.2
DCAR_014666 Daucus carota HOM05D003999 ORTHO05D005219 1.6e-55 221.1 307 39.1
MBI13_g34042_MAGBIO Magnolia biondii HOM05D003999 ORTHO05D005219 1.6e-55 221.1 286 41.3
CiPaw.08G032500 Carya illinoinensis HOM05D003999 ORTHO05D005219 3.0e-54 216.9 307 39.7
CAN.G79.26 Capsicum annuum HOM05D003999 ORTHO05D005219 1.5e-53 214.5 312 36.5
ATR0626G364 Amborella trichopoda HOM05D003999 ORTHO05D005219 2.5e-53 213.8 291 39.2
CDE06G2299 Ceratophyllum demersum HOM05D003999 ORTHO05D005219 9.6e-53 211.8 255 45.1
FAN08G2100 Fragaria x ananassa HOM05D003999 ORTHO05D005219 2.1e-52 210.7 324 38.9
FvH4_5g27730 Fragaria vesca HOM05D003999 ORTHO05D005219 2.8e-52 210.3 324 38.9
PSO170G0656 Papaver somniferum HOM05D003999 ORTHO05D005219 2.8e-52 210.3 254 42.5
Solyc02g069980.4 Solanum lycopersicum HOM05D003999 ORTHO05D005219 5.3e-51 206.1 280 36.8
Zm00001eb274650 Zea mays HOM05D003999 ORTHO05D005219 1.2e-50 204.9 266 42.5
Migut.J00798 Erythranthe guttata HOM05D003999 ORTHO05D005219 2.0e-50 204.1 295 39.3
CSS0024594 Camellia sinensis var. sinensis HOM05D003999 ORTHO05D005219 2.6e-50 203.8 298 40.3
unitig_8.g4939 Utricularia gibba HOM05D003999 ORTHO05D005219 5.8e-50 202.6 378 32.3
CDE02G3353 Ceratophyllum demersum HOM05D003999 ORTHO05D005219 1.7e-49 201.1 227 44.9
Haze_22020 Corylus avellana HOM05D003999 ORTHO05D005219 2.9e-49 200.3 259 40.2
DCAR_018034 Daucus carota HOM05D003999 ORTHO05D005219 8.4e-49 198.7 291 36.1
unitig_578.g16064 Utricularia gibba HOM05D003999 ORTHO05D005219 1.9e-48 197.6 342 33.6
DCAR_020148 Daucus carota HOM05D003999 ORTHO05D005219 7.1e-48 195.7 236 42.8
Nitab4.5_0001225g0140 Nicotiana tabacum HOM05D003999 ORTHO05D005219 2.1e-47 194.1 293 35.5
Lsat_1_v5_gn_7_51121 Lactuca sativa HOM05D003999 ORTHO05D005219 2.7e-47 193.7 417 32.1
Nitab4.5_0001583g0100 Nicotiana tabacum HOM05D003999 ORTHO05D005219 1.0e-46 191.8 293 34.8
Zm00001eb002000 Zea mays HOM05D003999 ORTHO05D005219 3.0e-46 190.3 283 37.8
ATR0681G357 Amborella trichopoda HOM05D003999 ORTHO05D005219 3.9e-46 189.9 260 39.2
CSS0017119 Camellia sinensis var. sinensis HOM05D003999 ORTHO05D005219 1.5e-45 188.0 250 41.6
Thhalv10022602m.g Eutrema salsugineum HOM05D003999 ORTHO05D005219 2.5e-45 187.2 259 42.5
Os04g0425100 Oryza sativa ssp. japonica HOM05D003999 ORTHO05D005219 5.6e-45 186.0 272 38.6
Carub.0003s3349 Capsella rubella HOM05D003999 ORTHO05D005219 1.3e-44 184.9 320 37.8
Sp3g32620 Schrenkiella parvula HOM05D003999 ORTHO05D005219 1.4e-43 181.4 235 43.4
BcaC04g22860 Brassica carinata HOM05D003999 ORTHO05D005219 1.8e-43 181.0 239 41.0
BolC9t54356H Brassica oleracea HOM05D003999 ORTHO05D005219 1.8e-43 181.0 239 41.0
A07p01530 Brassica napus HOM05D003999 ORTHO05D005219 5.3e-43 179.5 256 40.6
BraA07t27954Z Brassica rapa HOM05D003999 ORTHO05D005219 5.3e-43 179.5 256 40.6
C09p14530 Brassica napus HOM05D003999 ORTHO05D005219 1.5e-42 177.9 233 43.8
GSVIVG01010859001 Vitis vinifera HOM05D003999 ORTHO05D005219 9.9e-42 175.3 148 56.1
AL3G49030 Arabidopsis lyrata HOM05D003999 ORTHO05D005219 1.7e-41 174.5 283 36.7
AT2G19260 Arabidopsis thaliana HOM05D003999 ORTHO05D005219 1.7e-41 174.5 255 40.8
BcaB07g31614 Brassica carinata HOM05D003999 ORTHO05D005219 2.2e-41 174.1 235 42.1
C07p03110 Brassica napus HOM05D003999 ORTHO05D005219 3.2e-40 170.2 233 41.6
BolC7t40703H Brassica oleracea HOM05D003999 ORTHO05D005219 3.2e-40 170.2 233 41.6
BcaB03g16715 Brassica carinata HOM05D003999 ORTHO05D005219 7.1e-40 169.1 232 39.7
BcaC06g36543 Brassica carinata HOM05D003999 ORTHO05D005219 7.1e-40 169.1 233 41.2
ECA234G1030 Erigeron canadensis HOM05D003999 ORTHO05D005219 5.1e-38 162.9 201 43.3
SalBow5G4070 Salvia bowleyana HOM05D003999 ORTHO05D005219 4.3e-37 159.8 308 31.8
Cc00_g03720 Coffea canephora HOM05D003999 ORTHO05D005219 5.6e-37 159.5 260 34.6
CARHR109720 Cardamine hirsuta HOM05D003999 ORTHO05D005219 3.7e-36 156.8 247 37.2
Manes.03G002401 Manihot esculenta HOM05D003999 ORTHO05D005219 1.1e-35 155.2 352 35.2
Mapoly0046s0104 Marchantia polymorpha HOM05D003999 ORTHO05D005219 6.9e-35 152.5 265 31.7
SMO117G0282 Selaginella moellendorffii HOM05D003999 ORTHO05D005219 4.6e-31 139.8 296 29.1
Aa31LG8G16300 Aethionema arabicum HOM05D003999 ORTHO05D005219 1.8e-30 137.9 269 32.0
Prupe.5G240400 Prunus persica HOM05D003999 ORTHO05D005219 1.8e-30 137.9 148 51.4
ClCG06G013610 Citrullus lanatus HOM05D003999 ORTHO05D005219 5.7e-29 132.9 108 51.9
SEGI_05476 Sequoiadendron giganteum HOM05D003999 ORTHO05D005219 7.4e-29 132.5 300 31.3
Actinidia27131 Actinidia chinensis HOM05D003999 ORTHO05D005219 2.4e-27 127.5 191 38.7
MSTRG.10442 Avicennia marina HOM05D003999 ORTHO05D005219 4.1e-27 126.7 116 49.1
SEGI_29375 Sequoiadendron giganteum HOM05D003999 ORTHO05D005219 4.1e-27 126.7 270 30.4
PGSC0003DMG400021118 Solanum tuberosum HOM05D003999 ORTHO05D005219 5.8e-26 122.9 286 29.0
GSVIVG01035550001 Vitis vinifera HOM05D003999 ORTHO05D005219 1.0e-25 122.1 74 71.6
RcHm_v2.0_Chr7g0177591 Rosa chinensis HOM05D003999 ORTHO05D005219 6.5e-25 119.4 158 42.4
HPP92_010790 Vanilla planifolia HOM05D003999 ORTHO05D005219 8.4e-25 119.0 168 41.1
FvH4_5g18011 Fragaria vesca HOM05D003999 ORTHO05D005219 4.2e-24 116.7 171 40.4
MD06G1235600 Malus domestica HOM05D003999 ORTHO05D005219 4.2e-24 116.7 151 43.0
FAN18G0538 Fragaria x ananassa HOM05D003999 ORTHO05D005219 1.6e-23 114.8 171 39.8
Cfa020674 Carpinus fangiana HOM05D003999 ORTHO05D005219 1.8e-22 111.3 79 59.5
Oeu064556.1 Olea europaea HOM05D003999 ORTHO05D005219 1.8e-22 111.3 190 33.7
FAN13G0118 Fragaria x ananassa HOM05D003999 ORTHO05D005219 3.0e-22 110.5 169 39.6
MBI16_g10833_MAGBIO Magnolia biondii HOM05D003999 ORTHO05D005219 2.9e-17 94.0 184 33.2
Phvul.007G142700 Phaseolus vulgaris HOM05D003999 ORTHO05D005219 2.7e-15 87.4 186 30.6
SEGI_17596 Sequoiadendron giganteum HOM05D003999 ORTHO05D005219 6.1e-15 86.3 188 31.4
MSTRG.10441 Avicennia marina HOM05D003999 ORTHO05D005219 2.0e-13 81.3 101 36.6
PGR044G2313 Punica granatum HOM05D003999 ORTHO05D005219 6.9e-11 72.8 103 38.8
Lj3A899T68 Lonicera japonica HOM05D002415 ORTHO05D002522 2.7e-07 60.8 77 37.7
AL2G37430 Arabidopsis lyrata HOM05D004258 ORTHO05D005163 6.1e-07 59.7 56 39.3
AT1G77250 Arabidopsis thaliana HOM05D004258 ORTHO05D005163 6.1e-07 59.7 64 37.5
Peaxi162Scf00618g00224 Petunia axillaris HOM05D002415 ORTHO05D002522 6.1e-07 59.7 53 43.4
THA.LOC104803335 Tarenaya hassleriana HOM05D002415 ORTHO05D002522 7.9e-07 59.3 73 38.4
HPP92_007148 Vanilla planifolia HOM05D002415 ORTHO05D002522 7.9e-07 59.3 50 48.0
Sabra15G0007600 Salix brachista HOM05D002415 ORTHO05D002522 1.0e-06 58.9 108 30.6
CSS0037563 Camellia sinensis var. sinensis HOM05D002415 ORTHO05D002522 1.4e-06 58.5 121 27.3
Carub.0002s2412 Capsella rubella HOM05D004258 ORTHO05D005163 1.4e-06 58.5 66 34.8
AagrBONN_evm.TU.Sc2ySwM_340.1664 Anthoceros agrestis HOM05D000465 ORTHO05D000301 2.3e-06 57.8 51 43.1
A07p28070 Brassica napus HOM05D004258 ORTHO05D005163 2.3e-06 57.8 56 37.5
BraA07t30452Z Brassica rapa HOM05D004258 ORTHO05D005163 2.3e-06 57.8 56 37.5
Peaxi162Scf00740g00247 Petunia axillaris HOM05D002415 ORTHO05D002522 3.0e-06 57.4 101 28.7
CSS0023308 Camellia sinensis var. sinensis HOM05D002415 ORTHO05D002522 3.9e-06 57.0 104 28.8
Dinv35355 Davidia involucrata HOM05D002415 ORTHO05D002522 5.1e-06 56.6 73 35.6
GSVIVG01038589001 Vitis vinifera HOM05D002415 ORTHO05D002522 5.1e-06 56.6 70 38.6
AL6G35850 Arabidopsis lyrata HOM05D002415 ORTHO05D002522 6.7e-06 56.2 86 30.2
CARHR070720 Cardamine hirsuta HOM05D004258 ORTHO05D005163 6.7e-06 56.2 56 37.5
Migut.F00189 Erythranthe guttata HOM05D002415 ORTHO05D002522 6.7e-06 56.2 50 48.0
Carub.0006s2215 Capsella rubella HOM05D002415 ORTHO05D002522 8.8e-06 55.8 95 31.6
CARHR189120 Cardamine hirsuta HOM05D002415 ORTHO05D002522 8.8e-06 55.8 95 31.6
Thhalv10018403m.g Eutrema salsugineum HOM05D004258 ORTHO05D005163 8.8e-06 55.8 106 27.4
Pp3c24_14110 Physcomitrium patens HOM05D002415 ORTHO05D002522 8.8e-06 55.8 63 36.5
Potri.012G018300 Populus trichocarpa HOM05D002415 ORTHO05D002522 8.8e-06 55.8 47 48.9
Sabra12G0014200 Salix brachista HOM05D002415 ORTHO05D002522 8.8e-06 55.8 47 48.9


User provided reference genes

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