Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G242600 Populus trichocarpa HOM05D003689 ORTHO05D003950 1.5e-95 352.8 172 100.0
Potri.018G037200 Populus trichocarpa HOM05D003689 ORTHO05D003950 3.6e-54 215.3 152 73.7
Sabra18G0038000 Salix brachista HOM05D003689 ORTHO05D003950 4.6e-49 198.4 152 69.7
Manes.16G066100 Manihot esculenta HOM05D003689 ORTHO05D003950 5.5e-42 174.9 152 57.9
Thecc.09G039700 Theobroma cacao HOM05D003689 ORTHO05D003950 1.8e-32 143.3 150 51.3
Ciclev10007728m.g Citrus clementina HOM05D003689 ORTHO05D003950 5.7e-31 138.3 142 53.5
CiPaw.07G207300 Carya illinoinensis HOM05D003689 ORTHO05D003950 2.8e-30 136.0 146 54.1
QL12p026389 Quercus lobata HOM05D003689 ORTHO05D003950 1.8e-29 133.3 147 53.7
Prupe.1G452700 Prunus persica HOM05D003689 ORTHO05D003950 5.9e-28 128.3 147 49.0
Gorai.004G290700 Gossypium raimondii HOM05D003689 ORTHO05D003950 7.6e-28 127.9 150 46.7
Gohir.D08G272300 Gossypium hirsutum HOM05D003689 ORTHO05D003950 2.2e-27 126.3 150 46.0
Duzib187G1779 Durio zibethinus HOM05D003689 ORTHO05D003950 3.8e-27 125.6 149 48.3
Haze_21848 Corylus avellana HOM05D003689 ORTHO05D003950 1.4e-26 123.6 147 49.0
RcHm_v2.0_Chr6g0305741 Rosa chinensis HOM05D003689 ORTHO05D003950 4.2e-26 122.1 145 45.5
Cfa013343 Carpinus fangiana HOM05D003689 ORTHO05D003950 1.6e-25 120.2 147 48.3
MD08G1118600 Malus domestica HOM05D003689 ORTHO05D003950 1.6e-25 120.2 146 45.9
Gohir.A08G250800 Gossypium hirsutum HOM05D003689 ORTHO05D003950 2.1e-25 119.8 149 45.0
FAN15G3321 Fragaria x ananassa HOM05D003689 ORTHO05D003950 6.1e-25 118.2 146 46.6
TWI63G0545 Tripterygium wilfordii HOM05D003689 ORTHO05D003950 5.7e-23 111.7 146 45.2
FAN20G2410 Fragaria x ananassa HOM05D003689 ORTHO05D003950 2.8e-22 109.4 143 44.1
FAN27G3406 Fragaria x ananassa HOM05D003689 ORTHO05D003950 3.1e-21 105.9 137 45.3
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 6.9e-21 104.8 129 41.1
GSVIVG01035672001 Vitis vinifera HOM05D003689 ORTHO05D003950 9.1e-21 104.4 152 42.8
Sabra06G0189700 Salix brachista HOM05D003689 ORTHO05D003950 1.3e-19 100.5 122 50.8
PGSC0003DMG400014513 Solanum tuberosum HOM05D003689 ORTHO05D003950 1.3e-19 100.5 152 41.4
Solyc08g068230.4 Solanum lycopersicum HOM05D003689 ORTHO05D003950 2.9e-19 99.4 151 41.1
Sopen08g022090 Solanum pennellii HOM05D003689 ORTHO05D003950 2.9e-19 99.4 151 41.1
ClCG11G014000 Citrullus lanatus HOM05D008234 ORTHO05D010422 6.5e-19 98.2 126 42.1
FvH4_2g36130 Fragaria vesca HOM05D003689 ORTHO05D003950 6.5e-19 98.2 132 44.7
Peaxi162Scf00523g00624 Petunia axillaris HOM05D003689 ORTHO05D003950 6.5e-19 98.2 151 41.1
CSS0006196 Camellia sinensis var. sinensis HOM05D003689 ORTHO05D003950 7.2e-18 94.7 132 42.4
Nitab4.5_0003338g0050 Nicotiana tabacum HOM05D003689 ORTHO05D003950 1.6e-17 93.6 152 38.2
Eucgr.C02891 Eucalyptus grandis HOM05D003689 ORTHO05D003950 2.1e-17 93.2 142 40.1
Nn7g35992 Nelumbo nucifera HOM05D003689 ORTHO05D003950 2.1e-17 93.2 141 37.6
Nn8g39148 Nelumbo nucifera HOM05D003689 ORTHO05D003950 2.7e-17 92.8 140 37.9
Nitab4.5_0000052g0100 Nicotiana tabacum HOM05D003689 ORTHO05D003950 2.7e-17 92.8 152 38.2
GSVIVG01015378001 Vitis vinifera HOM05D003689 ORTHO05D003950 4.4e-15 85.5 147 38.1
MD15G1097800 Malus domestica HOM05D003689 ORTHO05D003950 7.4e-15 84.7 124 43.5
MBI04_g43860_MAGBIO Magnolia biondii HOM05D003689 ORTHO05D003950 1.3e-14 84.0 147 36.1
Cc00_g17700 Coffea canephora HOM05D003689 ORTHO05D003950 1.7e-14 83.6 142 37.3
Hma1.2p1_0140F.1_g063530 Hydrangea macrophylla HOM05D003689 ORTHO05D003950 1.7e-14 83.6 143 39.9
PSO210G3978 Papaver somniferum HOM05D003689 ORTHO05D003950 2.2e-14 83.2 142 33.8
CAN.G797.4 Capsicum annuum HOM05D003689 ORTHO05D003950 4.8e-14 82.0 128 39.1
AUR62009331 Chenopodium quinoa HOM05D003689 ORTHO05D003950 4.8e-14 82.0 143 36.4
Manes.03G021600 Manihot esculenta HOM05D003689 ORTHO05D003950 6.3e-14 81.6 150 32.0
Cpa.g.sc78.81 Carica papaya HOM05D003689 ORTHO05D003950 8.2e-14 81.3 145 39.3
Haze_25759 Corylus avellana HOM05D003689 ORTHO05D003950 8.2e-14 81.3 150 34.7
PSO210G7239 Papaver somniferum HOM05D003689 ORTHO05D003950 8.2e-14 81.3 142 33.1
AUR62023017 Chenopodium quinoa HOM05D003689 ORTHO05D003950 1.1e-13 80.9 143 35.7
Cfa003251 Carpinus fangiana HOM05D003689 ORTHO05D003950 1.8e-13 80.1 150 34.7
EL10Ac2g04074 Beta vulgaris HOM05D003689 ORTHO05D003950 2.6e-12 76.3 143 33.6
Lalb_Chr14g0362401 Lupinus albus HOM05D003689 ORTHO05D003950 3.4e-12 75.9 153 34.6
arahy.Tifrunner.gnm1.ann1.6C9669 Arachis hypogaea HOM05D003689 ORTHO05D003950 4.5e-12 75.5 147 36.7
arahy.Tifrunner.gnm1.ann1.WWE821 Arachis hypogaea HOM05D003689 ORTHO05D003950 1.7e-11 73.6 147 36.1
Ah.16g105250 Amaranthus hybridus HOM05D003689 ORTHO05D003950 2.2e-11 73.2 143 36.4
Thecc.09G108800 Theobroma cacao HOM05D003689 ORTHO05D003950 2.2e-11 73.2 145 31.7
QL02p045402 Quercus lobata HOM05D003689 ORTHO05D003950 3.8e-11 72.4 145 35.9
QL02p044325 Quercus lobata HOM05D003689 ORTHO05D003950 1.9e-10 70.1 145 35.2
TAR624G0021 Trochodendron aralioides HOM05D003689 ORTHO05D003950 1.9e-10 70.1 94 38.3
CDE02G3880 Ceratophyllum demersum HOM05D003689 ORTHO05D003950 4.2e-10 68.9 136 29.4
Sed0002455 Sechium edule HOM05D003689 ORTHO05D003950 4.2e-10 68.9 78 42.3
Glyma.14G141800 Glycine max HOM05D003689 ORTHO05D003950 5.5e-10 68.6 149 34.9
Potri.018G081700 Populus trichocarpa HOM05D003689 ORTHO05D003950 9.4e-10 67.8 118 29.7
Gorai.010G072200 Gossypium raimondii HOM05D003689 ORTHO05D003950 1.2e-09 67.4 152 28.3
Gohir.D06G062000 Gossypium hirsutum HOM05D003689 ORTHO05D003950 2.1e-09 66.6 149 28.9
MD15G1183500 Malus domestica HOM05D003689 ORTHO05D003950 2.1e-09 66.6 134 36.6
Gohir.A06G063300 Gossypium hirsutum HOM05D003689 ORTHO05D003950 6.1e-09 65.1 153 29.4
Duzib150G1680 Durio zibethinus HOM05D003689 ORTHO05D003950 8.0e-09 64.7 112 33.0
Ciclev10007776m.g Citrus clementina HOM05D003689 ORTHO05D003950 1.0e-08 64.3 146 32.2
MSTRG.14008 Avicennia marina HOM05D003689 ORTHO05D003950 1.8e-08 63.5 145 33.8
FAN28G1273 Fragaria x ananassa HOM05D003689 ORTHO05D003950 2.3e-08 63.2 155 31.0
PGR044G1205 Punica granatum HOM05D003689 ORTHO05D003950 3.0e-08 62.8 140 34.3
Sabra18G0068800 Salix brachista HOM05D003689 ORTHO05D003950 3.9e-08 62.4 123 30.1
FvH4_1g04540 Fragaria vesca HOM05D003689 ORTHO05D003950 6.7e-08 61.6 140 32.1
FAN23G2385 Fragaria x ananassa HOM05D003689 ORTHO05D003950 6.7e-08 61.6 140 32.1
CANSAT56G4471 Cannabis sativa HOM05D003689 ORTHO05D003950 1.1e-07 60.8 155 32.3
CDE04G3773 Ceratophyllum demersum HOM05D003689 ORTHO05D003950 1.1e-07 60.8 140 28.6
FAN26G3272 Fragaria x ananassa HOM05D003689 ORTHO05D003950 2.0e-07 60.1 140 31.4
RcHm_v2.0_Chr2g0090251 Rosa chinensis HOM05D003689 ORTHO05D003950 2.0e-07 60.1 140 30.7
TWI34G0694 Tripterygium wilfordii HOM05D003689 ORTHO05D003950 7.4e-07 58.2 123 28.5
ATR0315G024 Amborella trichopoda HOM05D003689 ORTHO05D003950 2.2e-06 56.6 148 31.8
Cpa.g.sc23.95 Carica papaya HOM05D003689 ORTHO05D003950 2.8e-06 56.2 142 31.0
Ca_12812_v3 Cicer arietinum L. HOM05D003689 ORTHO05D003950 2.8e-06 56.2 156 28.8
CANSAT56G1603 Cannabis sativa HOM05D003689 ORTHO05D003950 3.7e-06 55.8 155 31.0


User provided reference genes

Program Settings