Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G027800 Populus trichocarpa HOM05D007873 ORTHO05D008474 2.4e-184 648.7 320 100.0
Potri.006G028000 Populus trichocarpa HOM05D007873 ORTHO05D008474 6.8e-179 630.6 320 97.5
Sabra06G0020600 Salix brachista HOM05D007873 ORTHO05D008474 4.0e-131 471.9 320 76.6
Potri.006G028601 Populus trichocarpa HOM05D007873 ORTHO05D008474 2.0e-50 203.8 127 82.7
Hma1.2p1_1796F.1_g302765 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 6.1e-47 192.2 276 40.2
RhsimUnG0137100 Rhododendron simsii HOM05D007873 ORTHO05D008474 7.5e-45 185.3 248 40.7
Hma1.2p1_1730F.1_g299700 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 9.8e-45 184.9 265 39.6
MD08G1097300 Malus domestica HOM05D007873 ORTHO05D008474 3.7e-44 183.0 267 37.1
Hma1.2p1_1796F.1_g302770 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 4.1e-43 179.5 265 40.0
MELO3C029150.2 Cucumis melo HOM05D007873 ORTHO05D008474 4.3e-40 169.5 269 39.0
Aqoxy4G00463 Aquilegia oxysepala HOM05D007873 ORTHO05D008474 9.5e-40 168.3 266 38.0
Duzib147G1581 Durio zibethinus HOM05D007873 ORTHO05D008474 1.2e-39 167.9 257 40.9
CsaV3_6G003670 Cucumis sativus L. HOM05D007873 ORTHO05D008474 1.8e-38 164.1 268 39.6
Gohir.A13G077400 Gossypium hirsutum HOM05D007873 ORTHO05D008474 9.8e-37 158.3 284 36.3
MELO3C011620.2 Cucumis melo HOM05D007873 ORTHO05D008474 1.3e-36 157.9 259 38.2
Duzib147G0268 Durio zibethinus HOM05D007873 ORTHO05D008474 6.4e-36 155.6 267 40.4
ClCG09G009010 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.1e-35 154.8 268 36.9
Duzib147G1609 Durio zibethinus HOM05D007873 ORTHO05D008474 1.1e-35 154.8 257 40.5
ClCG08G004200 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.2e-34 151.4 257 35.4
MELO3C025120.2 Cucumis melo HOM05D007873 ORTHO05D008474 4.6e-34 149.4 256 35.2
CsaV3_5G024290 Cucumis sativus L. HOM05D007873 ORTHO05D008474 2.3e-33 147.1 256 34.8
ClCG08G004160 Citrullus lanatus HOM05D007873 ORTHO05D008474 2.5e-32 143.7 260 34.6
Gohir.D13G076700 Gossypium hirsutum HOM05D007873 ORTHO05D008474 1.2e-31 141.4 257 37.7
Gorai.013G087700 Gossypium raimondii HOM05D007873 ORTHO05D008474 1.2e-31 141.4 257 37.7
Sed0008206 Sechium edule HOM05D007873 ORTHO05D008474 2.1e-31 140.6 247 37.2
Sed0020612 Sechium edule HOM05D007873 ORTHO05D008474 2.8e-31 140.2 286 36.4
Sed0009445 Sechium edule HOM05D007873 ORTHO05D008474 8.9e-30 135.2 261 35.2
MELO3C010591.2 Cucumis melo HOM05D007873 ORTHO05D008474 1.5e-29 134.4 261 34.5
Zm00001eb096930 Zea mays HOM05D007873 ORTHO05D008474 1.1e-27 128.3 297 32.0
Gorai.007G058500 Gossypium raimondii HOM05D007873 ORTHO05D008474 2.1e-23 114.0 247 34.8
EL10Ac5g11134 Beta vulgaris HOM05D007873 ORTHO05D008474 1.1e-22 111.7 185 38.9
Sed0023660 Sechium edule HOM05D007873 ORTHO05D022399 2.2e-20 104.0 265 31.7
Hma1.2p1_0128F.1_g060000 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 4.1e-19 99.8 145 43.4
AUR62041699 Chenopodium quinoa HOM05D007873 ORTHO05D008474 7.1e-19 99.0 259 32.0
MELO3C019474.2 Cucumis melo HOM05D007873 ORTHO05D022399 1.7e-17 94.4 270 27.8
ClCG05G009670 Citrullus lanatus HOM05D007873 ORTHO05D022399 3.0e-17 93.6 270 29.3
CsaV3_3G019020 Cucumis sativus L. HOM05D007873 ORTHO05D022399 9.6e-16 88.6 277 30.0
CsaV3_3G019090 Cucumis sativus L. HOM05D007873 ORTHO05D022399 3.6e-15 86.7 236 30.1
Duzib147G0130 Durio zibethinus HOM05D007873 ORTHO05D008474 1.4e-14 84.7 113 38.9
Potri.006G021800 Populus trichocarpa HOM05D007873 ORTHO05D008474 2.0e-13 80.9 125 36.0
CsaV3_3G019050 Cucumis sativus L. HOM05D007873 ORTHO05D022399 5.8e-13 79.3 270 27.8
Duzib147G0086 Durio zibethinus HOM05D007873 ORTHO05D008474 5.8e-13 79.3 102 43.1
Sed0017012 Sechium edule HOM05D007873 ORTHO05D008474 1.3e-12 78.2 199 28.1
Gohir.A13G077500 Gossypium hirsutum HOM05D007873 ORTHO05D008474 1.1e-11 75.1 84 46.4
Duzib147G1542 Durio zibethinus HOM05D007873 ORTHO05D008474 1.2e-10 71.6 101 41.6
Sed0004801 Sechium edule HOM05D007873 ORTHO05D008474 3.6e-07 60.1 121 33.1


User provided reference genes

Program Settings