Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G085100 Populus trichocarpa HOM05D008015 ORTHO05D009180 1.3e-108 396.4 193 100.0
Potri.017G131300 Populus trichocarpa HOM05D008015 ORTHO05D009180 3.6e-58 228.8 177 68.9
Sabra17G0109400 Salix brachista HOM05D008015 ORTHO05D009180 3.9e-57 225.3 183 65.6
QL02p059324 Quercus lobata HOM05D008015 ORTHO05D009180 7.5e-40 167.9 167 54.5
TAR371G1005 Trochodendron aralioides HOM05D008015 ORTHO05D009180 8.3e-39 164.5 166 56.0
Manes.02G078100 Manihot esculenta HOM05D008015 ORTHO05D009180 7.0e-38 161.4 183 54.6
Ciclev10012847m.g Citrus clementina HOM05D008015 ORTHO05D009180 2.3e-33 146.4 171 50.3
Cfa007792 Carpinus fangiana HOM05D008015 ORTHO05D009180 3.0e-33 146.0 182 50.0
Oeu032314.1 Olea europaea HOM05D008015 ORTHO05D009180 2.6e-32 142.9 164 48.8
Nn4g24386 Nelumbo nucifera HOM05D008015 ORTHO05D009180 3.4e-32 142.5 167 50.9
Duzib268G1603 Durio zibethinus HOM05D008015 ORTHO05D009180 5.7e-32 141.7 169 50.3
TAR629G2519 Trochodendron aralioides HOM05D008015 ORTHO05D009180 3.7e-31 139.0 181 50.8
Thecc.04G053900 Theobroma cacao HOM05D008015 ORTHO05D009180 2.7e-29 132.9 178 48.3
Lalb_Chr18g0053531 Lupinus albus HOM05D008015 ORTHO05D009180 1.3e-28 130.6 164 48.8
LjContig00141g0001505 Lotus japonicus HOM05D008015 ORTHO05D009180 1.7e-28 130.2 173 46.8
CiPaw.03G073500 Carya illinoinensis HOM05D008015 ORTHO05D009180 1.1e-27 127.5 170 44.1
Cc07_g13270 Coffea canephora HOM05D008015 ORTHO05D009180 9.5e-27 124.4 191 40.8
Glyma.14G213100 Glycine max HOM05D008015 ORTHO05D009180 9.5e-27 124.4 177 43.5
Nn3g18370 Nelumbo nucifera HOM05D008015 ORTHO05D009180 1.6e-26 123.6 145 49.0
CSS0009801 Camellia sinensis var. sinensis HOM05D008015 ORTHO05D009180 2.8e-26 122.9 162 46.9
CSS0018355 Camellia sinensis var. sinensis HOM05D008015 ORTHO05D009180 2.8e-26 122.9 162 46.9
Medtr3g065210 Medicago truncatula HOM05D008015 ORTHO05D009180 3.6e-26 122.5 167 43.1
VMungo0647G1978 Vigna mungo HOM05D008015 ORTHO05D009180 1.8e-25 120.2 168 44.0
Lalb_Chr15g0084981 Lupinus albus HOM05D008015 ORTHO05D009180 5.2e-25 118.6 169 46.2
TWI77G0273 Tripterygium wilfordii HOM05D008015 ORTHO05D009180 5.2e-25 118.6 192 44.3
Cpa.g.sc340.4 Carica papaya HOM05D008015 ORTHO05D009180 6.8e-25 118.2 199 43.7
Eucgr.F02874 Eucalyptus grandis HOM05D008015 ORTHO05D009180 2.6e-24 116.3 182 39.0
MBI13_g45895_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 5.8e-24 115.2 174 42.0
TWI74G1025 Tripterygium wilfordii HOM05D008015 ORTHO05D009180 5.8e-24 115.2 181 42.0
Sed0025761 Sechium edule HOM05D008015 ORTHO05D009180 1.7e-23 113.6 177 40.7
MSTRG.3702 Avicennia marina HOM05D008015 ORTHO05D009180 2.2e-23 113.2 167 43.1
Glyma.18G041300 Glycine max HOM05D008015 ORTHO05D009180 1.1e-22 110.9 152 46.1
Prupe.3G166400 Prunus persica HOM05D008015 ORTHO05D009180 1.4e-22 110.5 216 38.4
RcHm_v2.0_Chr3g0491241 Rosa chinensis HOM05D008015 ORTHO05D009180 1.4e-22 110.5 203 36.5
MBI19_g08383_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 2.4e-22 109.8 164 40.9
TPR.G30001 Trifolium pratense HOM05D008015 ORTHO05D009180 3.2e-22 109.4 155 45.8
Lalb_Chr17g0346041 Lupinus albus HOM05D008015 ORTHO05D009180 5.4e-22 108.6 177 42.9
Actinidia35723 Actinidia chinensis HOM05D008015 ORTHO05D009180 3.5e-21 105.9 164 40.2
MELO3C022825.2 Cucumis melo HOM05D008015 ORTHO05D009180 3.5e-21 105.9 173 38.7
MBI13_g14024_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 4.6e-21 105.5 180 38.9
MD09G1270500 Malus domestica HOM05D008015 ORTHO05D009180 4.6e-21 105.5 208 38.0
ClCG03G008850 Citrullus lanatus HOM05D008015 ORTHO05D009180 7.8e-21 104.8 176 39.8
FAN23G1273 Fragaria x ananassa HOM05D008015 ORTHO05D009180 7.8e-21 104.8 184 35.9
CANSAT35G1526 Cannabis sativa HOM05D008015 ORTHO05D009180 1.0e-20 104.4 173 42.8
FAN26G1918 Fragaria x ananassa HOM05D008015 ORTHO05D009180 1.0e-20 104.4 184 35.9
SalBow5G5173 Salvia bowleyana HOM05D008015 ORTHO05D009180 2.3e-20 103.2 171 38.6
VMungo1383G2632 Vigna mungo HOM05D008015 ORTHO05D009180 6.6e-20 101.7 143 44.1
Gohir.D07G078200 Gossypium hirsutum HOM05D008015 ORTHO05D009180 1.9e-19 100.1 152 46.1
Gorai.001G082600 Gossypium raimondii HOM05D008015 ORTHO05D009180 1.9e-19 100.1 152 46.1
CDE05G1037 Ceratophyllum demersum HOM05D008015 ORTHO05D009180 2.5e-19 99.8 175 41.1
DCAR_014163 Daucus carota HOM05D008015 ORTHO05D009180 2.5e-19 99.8 168 39.9
FvH4_1g30203 Fragaria vesca HOM05D008015 ORTHO05D009180 5.6e-19 98.6 137 42.3
Gohir.A07G073500 Gossypium hirsutum HOM05D008015 ORTHO05D009180 5.6e-19 98.6 152 44.7
Phvul.001G229400 Phaseolus vulgaris HOM05D008015 ORTHO05D009180 1.6e-18 97.1 105 53.3
Dinv28182 Davidia involucrata HOM05D008015 ORTHO05D009180 3.6e-18 95.9 176 39.8
Actinidia28799 Actinidia chinensis HOM05D008015 ORTHO05D009180 6.2e-18 95.1 163 36.8
Medtr5g077940 Medicago truncatula HOM05D008015 ORTHO05D009180 1.1e-17 94.4 156 40.4
PSO478G3758 Papaver somniferum HOM05D008015 ORTHO05D009180 1.1e-17 94.4 175 41.7
CsaV3_5G023910 Cucumis sativus L. HOM05D009275 ORTHO05D009180 1.8e-17 93.6 156 39.1
ATR0753G067 Amborella trichopoda HOM05D008015 ORTHO05D009180 4.0e-17 92.4 114 43.9
Rhsim10G0178500 Rhododendron simsii HOM05D008015 ORTHO05D009180 8.9e-17 91.3 171 37.4
CDE05G0668 Ceratophyllum demersum HOM05D006178 ORTHO05D007504 1.2e-16 90.9 176 38.6
COL.COLO4_13422 Corchorus olitorius HOM05D009275 ORTHO05D009180 1.5e-16 90.5 186 37.1
Phvul.008G237600 Phaseolus vulgaris HOM05D008015 ORTHO05D009180 2.6e-16 89.7 149 38.3
Psat2g045760 Pisum sativum HOM05D008015 ORTHO05D009180 1.3e-15 87.4 156 41.0
Glyma.11G215300 Glycine max HOM05D008015 ORTHO05D009180 1.1e-14 84.3 144 41.0
MBI13_g24899_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 1.9e-14 83.6 64 59.4
Aqoxy1G02179 Aquilegia oxysepala HOM05D008015 ORTHO05D009180 3.2e-14 82.8 178 33.7
BcaB06g27100 Brassica carinata HOM05D009275 ORTHO05D009180 4.1e-14 82.4 173 40.5
SGA_v2.0_scaffold45G17152 Striga asiatica HOM05D008015 ORTHO05D009180 5.4e-14 82.0 167 38.3
Aa31LG2G2900 Aethionema arabicum HOM05D009275 ORTHO05D009180 1.2e-13 80.9 203 35.0
FAN19G3187 Fragaria x ananassa HOM05D008015 ORTHO05D009180 1.2e-13 80.9 160 35.0
BraA02t06410Z Brassica rapa HOM05D009275 ORTHO05D009180 1.3e-12 77.4 185 34.6
AT5G37550 Arabidopsis thaliana HOM05D009275 ORTHO05D009180 1.7e-12 77.0 171 38.0
AL7G46310 Arabidopsis lyrata HOM05D009275 ORTHO05D009180 3.9e-12 75.9 166 39.2
CARHR292200 Cardamine hirsuta HOM05D009275 ORTHO05D009180 3.9e-12 75.9 116 43.1
Thhalv10019019m.g Eutrema salsugineum HOM05D009275 ORTHO05D009180 3.9e-12 75.9 195 34.9
PGR004G2766 Punica granatum HOM05D009275 ORTHO05D009180 5.1e-12 75.5 203 27.1
Sp5g21250 Schrenkiella parvula HOM05D009275 ORTHO05D009180 5.1e-12 75.5 169 34.9
Carub.0007s3272 Capsella rubella HOM05D009275 ORTHO05D009180 6.6e-12 75.1 165 37.6
C02p21840 Brassica napus HOM05D009275 ORTHO05D009180 8.6e-12 74.7 185 34.6
BolC2t08316H Brassica oleracea HOM05D009275 ORTHO05D009180 8.6e-12 74.7 185 34.6
BcaC03g14735 Brassica carinata HOM05D009275 ORTHO05D009180 1.1e-11 74.3 185 34.6
CARHR215350 Cardamine hirsuta HOM05D009275 ORTHO05D009180 1.1e-11 74.3 183 36.6
Thhalv10027910m.g Eutrema salsugineum HOM05D009275 ORTHO05D009180 1.1e-11 74.3 167 40.7
A02p13520 Brassica napus HOM05D009275 ORTHO05D009180 1.5e-11 73.9 185 33.5
BraA04t16736Z Brassica rapa HOM05D009275 ORTHO05D009180 3.3e-11 72.8 171 37.4
BcaB05g24157 Brassica carinata HOM05D009275 ORTHO05D009180 7.3e-11 71.6 189 32.8
A04p10720 Brassica napus HOM05D009275 ORTHO05D009180 7.3e-11 71.6 173 37.0
Sp7g04570 Schrenkiella parvula HOM05D009275 ORTHO05D009180 7.3e-11 71.6 169 38.5
BcaC02g09585 Brassica carinata HOM05D009275 ORTHO05D009180 9.5e-11 71.2 173 37.0
C04p44430 Brassica napus HOM05D009275 ORTHO05D009180 9.5e-11 71.2 173 37.0
BolC4t26014H Brassica oleracea HOM05D009275 ORTHO05D009180 9.5e-11 71.2 173 37.0
Lsat_1_v5_gn_8_114880 Lactuca sativa HOM05D008015 ORTHO05D009180 9.5e-11 71.2 163 35.6
Aa31LG9G17500 Aethionema arabicum HOM05D009275 ORTHO05D009180 1.2e-10 70.9 176 36.4
Actinidia17202 Actinidia chinensis HOM05D008015 ORTHO05D009180 2.1e-10 70.1 107 38.3
arahy.Tifrunner.gnm1.ann1.NRE7W4 Arachis hypogaea HOM05D009275 ORTHO05D009180 4.7e-10 68.9 111 43.2
AT1G66190 Arabidopsis thaliana HOM05D009275 ORTHO05D009180 8.1e-10 68.2 202 34.2
Carub.0002s1218 Capsella rubella HOM05D009275 ORTHO05D009180 8.1e-10 68.2 177 33.9
AL2G23880 Arabidopsis lyrata HOM05D009275 ORTHO05D009180 1.1e-09 67.8 147 36.7
unitig_32.g11793 Utricularia gibba HOM05D008015 ORTHO05D009180 4.0e-09 65.9 96 39.6
SEGI_26939 Sequoiadendron giganteum HOM05D040355 ORTHO05D037586 5.2e-09 65.5 134 32.8
Migut.K00921 Erythranthe guttata HOM05D008015 ORTHO05D009180 1.2e-08 64.3 95 46.3
THA.LOC104805631 Tarenaya hassleriana HOM05D009275 ORTHO05D009180 7.6e-08 61.6 53 62.3
Lsat_1_v5_gn_3_63900 Lactuca sativa HOM05D008015 ORTHO05D009180 1.7e-07 60.5 164 31.7
arahy.Tifrunner.gnm1.ann1.I66ZQ3 Arachis hypogaea HOM05D009275 ORTHO05D009180 2.9e-07 59.7 169 33.7
THA.LOC104822277 Tarenaya hassleriana HOM05D009275 ORTHO05D009180 2.9e-07 59.7 168 35.1
Eucgr.B00218 Eucalyptus grandis HOM05D007505 ORTHO05D009476 6.4e-07 58.5 100 33.0
Sed0000715 Sechium edule HOM05D007505 ORTHO05D009476 1.1e-06 57.8 96 37.5
TAR629G2155 Trochodendron aralioides HOM05D001124 ORTHO05D001004 3.2e-06 56.2 84 36.9
CsaV3_1G008840 Cucumis sativus L. HOM05D007505 ORTHO05D009476 4.1e-06 55.8 100 40.0
Actinidia19362 Actinidia chinensis HOM05D007505 ORTHO05D009476 9.2e-06 54.7 99 39.4
Hma1.2p1_0046F.1_g027150 Hydrangea macrophylla HOM05D007505 ORTHO05D009476 9.2e-06 54.7 99 38.4
Prupe.5G165400 Prunus persica HOM05D007505 ORTHO05D009476 9.2e-06 54.7 95 38.9


User provided reference genes

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