Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.L001641 Phaseolus vulgaris HOM05D000999 ORTHO05D031577 2.2e-64 248.8 130 100.0
Phvul.L001741 Phaseolus vulgaris HOM05D000999 ORTHO05D000961 1.1e-15 87.0 114 50.9
VMungo0720G1192 Vigna mungo HOM05D000999 ORTHO05D000961 9.6e-15 84.0 47 95.7
CiPaw.10G141500 Carya illinoinensis HOM05D000999 ORTHO05D000961 2.8e-14 82.4 67 67.2
Glyma.13G133600 Glycine max HOM05D000999 ORTHO05D000961 4.8e-14 81.6 46 93.5
Ca_09595_v3 Cicer arietinum L. HOM05D000999 ORTHO05D000961 8.1e-14 80.9 46 93.5
TPR.G29932 Trifolium pratense HOM05D000999 ORTHO05D000961 8.1e-14 80.9 46 93.5
Medtr1g067560 Medicago truncatula HOM05D000999 ORTHO05D000961 1.8e-13 79.7 46 91.3
Psat6g068560 Pisum sativum HOM05D000999 ORTHO05D000961 5.3e-13 78.2 82 58.5
Prupe.6G247400 Prunus persica HOM05D000999 ORTHO05D000961 9.0e-13 77.4 62 67.7
Glyma.10G045700 Glycine max HOM05D000999 ORTHO05D000961 2.0e-12 76.3 46 84.8
Lalb_Chr02g0153281 Lupinus albus HOM05D000999 ORTHO05D000961 3.4e-12 75.5 58 67.2
Duzib128G0279 Durio zibethinus HOM05D000999 ORTHO05D000961 5.8e-12 74.7 71 64.8
Haze_20716 Corylus avellana HOM05D000999 ORTHO05D000961 7.6e-12 74.3 67 65.7
Cfa017449 Carpinus fangiana HOM05D000999 ORTHO05D000961 9.9e-12 73.9 67 65.7
CiPaw.09G187200 Carya illinoinensis HOM05D000999 ORTHO05D000961 1.7e-11 73.2 92 51.1
Duzib093G1882 Durio zibethinus HOM05D000999 ORTHO05D000961 2.9e-11 72.4 69 63.8
Thecc.05G047000 Theobroma cacao HOM05D000999 ORTHO05D000961 6.4e-11 71.2 47 83.0
MD04G1118300 Malus domestica HOM05D000999 ORTHO05D000961 1.4e-10 70.1 89 49.4
Gohir.D04G118000 Gossypium hirsutum HOM05D000999 ORTHO05D000961 1.9e-10 69.7 72 56.9
Gorai.009G423000 Gossypium raimondii HOM05D000999 ORTHO05D000961 1.9e-10 69.7 72 56.9
Lj5g0012379 Lotus japonicus HOM05D000999 ORTHO05D000961 1.9e-10 69.7 41 90.2
arahy.Tifrunner.gnm1.ann1.5ZE3N1 Arachis hypogaea HOM05D000999 ORTHO05D031577 2.4e-10 69.3 41 80.5
arahy.Tifrunner.gnm1.ann1.ER4998 Arachis hypogaea HOM05D000999 ORTHO05D031577 2.4e-10 69.3 41 80.5
Manes.09G085600 Manihot esculenta HOM05D000999 ORTHO05D000961 3.2e-10 68.9 76 57.9
TWI77G0893 Tripterygium wilfordii HOM05D000999 ORTHO05D000961 4.2e-10 68.6 58 63.8
Gohir.A04G078800 Gossypium hirsutum HOM05D000999 ORTHO05D000961 5.4e-10 68.2 72 55.6
Lj1g0004558 Lotus japonicus HOM05D000999 ORTHO05D000961 9.3e-10 67.4 101 48.5
Phvul.001G171400 Phaseolus vulgaris HOM05D000999 ORTHO05D000961 9.3e-10 67.4 46 80.4
CANSAT80G0190 Cannabis sativa HOM05D000999 ORTHO05D000961 1.6e-09 66.6 44 81.8
Glyma.03G174100 Glycine max HOM05D000999 ORTHO05D000961 1.6e-09 66.6 49 75.5
VMungo1383G0767 Vigna mungo HOM05D000999 ORTHO05D000961 2.7e-09 65.9 116 45.7
Glyma.19G175100 Glycine max HOM05D000999 ORTHO05D000961 3.5e-09 65.5 52 71.2
Manes.08G074600 Manihot esculenta HOM05D000999 ORTHO05D000961 3.5e-09 65.5 70 58.6
Psat3g047320 Pisum sativum HOM05D000999 ORTHO05D000961 3.5e-09 65.5 48 75.0
RcHm_v2.0_Chr3g0467751 Rosa chinensis HOM05D000999 ORTHO05D000961 4.6e-09 65.1 46 76.1
Sabra06G0164800 Salix brachista HOM05D000999 ORTHO05D000961 4.6e-09 65.1 70 55.7
FvH4_6g14630 Fragaria vesca HOM05D000999 ORTHO05D000961 7.8e-09 64.3 46 76.1
FAN02G0868 Fragaria x ananassa HOM05D000999 ORTHO05D000961 7.8e-09 64.3 46 76.1
FAN05G5331 Fragaria x ananassa HOM05D000999 ORTHO05D000961 7.8e-09 64.3 46 76.1
FAN09G2510 Fragaria x ananassa HOM05D000999 ORTHO05D000961 7.8e-09 64.3 46 76.1
FAN14G5219 Fragaria x ananassa HOM05D000999 ORTHO05D000961 7.8e-09 64.3 46 76.1
Medtr7g100450 Medicago truncatula HOM05D000999 ORTHO05D000961 7.8e-09 64.3 72 59.7
QL07p046572 Quercus lobata HOM05D000999 ORTHO05D000961 1.0e-08 63.9 54 64.8
Atru.chr8.2488 Acer truncatum HOM05D000999 ORTHO05D000961 1.3e-08 63.5 53 73.6
Potri.006G213900 Populus trichocarpa HOM05D000999 ORTHO05D000961 1.3e-08 63.5 67 56.7
arahy.Tifrunner.gnm1.ann1.NBD2TE Arachis hypogaea HOM05D000999 ORTHO05D000961 1.7e-08 63.2 69 56.5
arahy.Tifrunner.gnm1.ann1.VWR9F9 Arachis hypogaea HOM05D000999 ORTHO05D000961 1.7e-08 63.2 69 56.5
Ciclev10012329m.g Citrus clementina HOM05D000999 ORTHO05D000961 3.0e-08 62.4 68 61.8
Potri.016G080400 Populus trichocarpa HOM05D000999 ORTHO05D000961 1.1e-07 60.5 67 56.7
Sabra16G0088600 Salix brachista HOM05D000999 ORTHO05D000961 1.1e-07 60.5 70 52.9
TPR.G36970 Trifolium pratense HOM05D000999 ORTHO05D000961 1.9e-07 59.7 48 68.8
CSS0048995 Camellia sinensis var. sinensis HOM05D000999 ORTHO05D000961 2.5e-07 59.3 70 55.7
TWI53G1282 Tripterygium wilfordii HOM05D000999 ORTHO05D000961 2.5e-07 59.3 83 50.6
MD12G1133800 Malus domestica HOM05D000999 ORTHO05D000961 5.6e-07 58.2 119 37.0
Gohir.A13G093490 Gossypium hirsutum HOM05D000999 ORTHO05D000961 9.6e-07 57.4 43 65.1
PSO675G0661 Papaver somniferum HOM05D000999 ORTHO05D000961 9.6e-07 57.4 44 65.9
GSVIVG01025598001 Vitis vinifera HOM05D000999 ORTHO05D000961 9.6e-07 57.4 97 46.4
Dinv35660 Davidia involucrata HOM05D000999 ORTHO05D000961 1.6e-06 56.6 47 68.1
Cc06_g03140 Coffea canephora HOM05D000999 ORTHO05D000961 2.8e-06 55.8 89 49.4
Gorai.001G250300 Gossypium raimondii HOM05D000999 ORTHO05D000961 3.6e-06 55.5 43 65.1
Nitab4.5_0008047g0010 Nicotiana tabacum HOM05D000999 ORTHO05D000961 3.6e-06 55.5 48 68.8
Sed0005368 Sechium edule HOM05D000999 ORTHO05D000961 3.6e-06 55.5 89 50.6
SalBow4G2001 Salvia bowleyana HOM05D000999 ORTHO05D000961 6.2e-06 54.7 52 51.9
Dinv37220 Davidia involucrata HOM05D000999 ORTHO05D000961 8.1e-06 54.3 48 62.5
PSO541G0988 Papaver somniferum HOM05D000999 ORTHO05D000961 8.1e-06 54.3 44 68.2


User provided reference genes

Program Settings