Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G212700 Phaseolus vulgaris HOM05D008019 ORTHO05D010184 9.7e-85 316.6 143 100.0
VMungo1127G0775 Vigna mungo HOM05D008019 ORTHO05D010184 1.8e-78 295.8 143 91.6
Glyma.12G238000 Glycine max HOM05D008019 ORTHO05D010184 7.9e-71 270.4 145 83.4
Lj3g0025736 Lotus japonicus HOM05D008019 ORTHO05D010184 4.4e-61 238.0 146 74.7
TPR.G1886 Trifolium pratense HOM05D008019 ORTHO05D010184 5.7e-61 237.7 148 70.3
arahy.Tifrunner.gnm1.ann1.V37GBM Arachis hypogaea HOM05D008019 ORTHO05D010184 7.7e-58 227.3 143 73.4
arahy.Tifrunner.gnm1.ann1.SF3C2I Arachis hypogaea HOM05D008019 ORTHO05D010184 1.0e-57 226.9 143 73.4
Cfa010760 Carpinus fangiana HOM05D008019 ORTHO05D010184 3.8e-57 224.9 144 72.2
Haze_03214 Corylus avellana HOM05D008019 ORTHO05D010184 2.5e-56 222.2 133 73.7
QL04p007219 Quercus lobata HOM05D008019 ORTHO05D010184 2.5e-56 222.2 138 71.7
TAR623G0854 Trochodendron aralioides HOM05D008019 ORTHO05D010184 3.2e-56 221.9 134 74.6
Prupe.2G012100 Prunus persica HOM05D008019 ORTHO05D010184 2.7e-55 218.8 125 74.4
TAR623G1004 Trochodendron aralioides HOM05D008019 ORTHO05D010184 8.0e-55 217.2 137 72.3
Manes.07G005100 Manihot esculenta HOM05D008019 ORTHO05D010184 1.4e-54 216.5 136 74.3
CANSAT80G0909 Cannabis sativa HOM05D008019 ORTHO05D010184 8.8e-54 213.8 138 67.4
Dinv43452 Davidia involucrata HOM05D008019 ORTHO05D010184 8.8e-54 213.8 141 72.3
Potri.001G268000 Populus trichocarpa HOM05D008019 ORTHO05D010184 1.2e-53 213.4 130 73.1
TWI09G1168 Tripterygium wilfordii HOM05D008019 ORTHO05D010184 1.2e-53 213.4 110 81.8
MD02G1313500 Malus domestica HOM05D008019 ORTHO05D010184 1.5e-53 213.0 122 75.4
Thecc.01G411900 Theobroma cacao HOM05D008019 ORTHO05D010184 2.6e-53 212.2 143 67.8
Ciclev10033035m.g Citrus clementina HOM05D008019 ORTHO05D010184 3.3e-53 211.8 108 82.4
Nn2g15438 Nelumbo nucifera HOM05D008019 ORTHO05D010184 4.4e-53 211.5 136 70.6
CAN.G1155.15 Capsicum annuum HOM05D008019 ORTHO05D010184 5.7e-53 211.1 126 73.0
Gohir.A12G094001 Gossypium hirsutum HOM05D008019 ORTHO05D010184 5.7e-53 211.1 124 75.8
Potri.009G062400 Populus trichocarpa HOM05D008019 ORTHO05D010184 9.7e-53 210.3 140 70.0
RcHm_v2.0_Chr1g0315801 Rosa chinensis HOM05D008019 ORTHO05D010184 1.3e-52 209.9 145 65.5
CSS0044570 Camellia sinensis var. sinensis HOM05D008019 ORTHO05D010184 1.7e-52 209.5 124 71.8
GSVIVG01032075001 Vitis vinifera HOM05D008019 ORTHO05D010184 1.7e-52 209.5 117 77.8
Oeu010780.1 Olea europaea HOM05D008019 ORTHO05D010184 2.8e-52 208.8 108 81.5
PGR044G0644 Punica granatum HOM05D008019 ORTHO05D010184 6.3e-52 207.6 147 65.3
Actinidia31058 Actinidia chinensis HOM05D008019 ORTHO05D010184 8.2e-52 207.2 116 75.0
SGA_v2.0_scaffold167G38441 Striga asiatica HOM05D008019 ORTHO05D010184 8.2e-52 207.2 104 81.7
Cc02_g27810 Coffea canephora HOM05D008019 ORTHO05D010184 1.1e-51 206.8 104 81.7
COL.COLO4_23925 Corchorus olitorius HOM05D008019 ORTHO05D010184 1.1e-51 206.8 131 69.5
MSTRG.17046 Avicennia marina HOM05D008019 ORTHO05D010184 3.1e-51 205.3 120 74.2
ECA248G1827 Erigeron canadensis HOM05D008019 ORTHO05D010184 7.0e-51 204.1 104 82.7
HanXRQChr01g0016161 Helianthus annuus HOM05D008019 ORTHO05D010184 1.2e-50 203.4 108 78.7
Lj9A631G50 Lonicera japonica HOM05D008019 ORTHO05D010184 1.6e-50 203.0 104 79.8
FvH4_7g00910 Fragaria vesca HOM05D008019 ORTHO05D010184 2.0e-50 202.6 150 64.0
FAN06G1027 Fragaria x ananassa HOM05D008019 ORTHO05D010184 2.0e-50 202.6 146 63.7
Eucgr.J01265 Eucalyptus grandis HOM05D008019 ORTHO05D010184 2.7e-50 202.2 124 71.0
Lsat_1_v5_gn_1_107820 Lactuca sativa HOM05D008019 ORTHO05D010184 2.7e-50 202.2 120 71.7
Rhsim07G0054900 Rhododendron simsii HOM05D008019 ORTHO05D010184 4.5e-50 201.4 134 68.7
FAN01G0739 Fragaria x ananassa HOM05D008019 ORTHO05D010184 7.7e-50 200.7 146 62.3
Gorai.008G105200 Gossypium raimondii HOM05D008019 ORTHO05D010184 1.3e-49 199.9 131 69.5
ClCG09G004230 Citrullus lanatus HOM05D008019 ORTHO05D010184 2.9e-49 198.7 104 76.9
THA.LOC104819690 Tarenaya hassleriana HOM05D008019 ORTHO05D010184 3.8e-49 198.4 107 76.6
MBI04_g13624_MAGBIO Magnolia biondii HOM05D008019 ORTHO05D010184 5.0e-49 198.0 124 70.2
Duzib138G0215 Durio zibethinus HOM05D008019 ORTHO05D010184 8.5e-49 197.2 144 63.9
CDE05G1162 Ceratophyllum demersum HOM05D008019 ORTHO05D010184 1.9e-48 196.1 145 61.4
Aqoxy7G00800 Aquilegia oxysepala HOM05D008019 ORTHO05D010184 2.5e-48 195.7 111 73.9
MELO3C023543.2 Cucumis melo HOM05D008019 ORTHO05D010184 7.2e-48 194.1 104 76.0
SalBow5G2002 Salvia bowleyana HOM05D008019 ORTHO05D010184 9.4e-48 193.7 108 74.1
CsaV3_7G031160 Cucumis sativus L. HOM05D008019 ORTHO05D010184 2.1e-47 192.6 128 66.4
Os09g0485800 Oryza sativa ssp. japonica HOM05D008019 ORTHO05D010184 3.6e-47 191.8 110 73.6
FAN10G3815 Fragaria x ananassa HOM05D008019 ORTHO05D010184 2.3e-46 189.1 144 60.4
SEGI_23902 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 4.0e-46 188.3 112 69.6
Sabra09G0046100 Salix brachista HOM05D000752 ORTHO05D000572 2.0e-45 186.0 91 84.6
unitig_750.g28450 Utricularia gibba HOM05D008019 ORTHO05D010184 4.4e-45 184.9 119 64.7
vmacro13657 Vaccinium macrocarpon HOM05D008019 ORTHO05D010184 1.8e-43 179.5 182 50.0
Lalb_Chr19g0132131 Lupinus albus HOM05D008019 ORTHO05D010184 7.0e-43 177.6 77 98.7
Migut.B01317 Erythranthe guttata HOM05D008019 ORTHO05D010184 3.8e-41 171.8 88 79.5
Pp3c14_7420 Physcomitrium patens HOM05D008019 ORTHO05D010184 1.2e-39 166.8 104 65.4
Sed0006336 Sechium edule HOM05D008019 ORTHO05D010184 3.6e-39 165.2 104 69.2
FAN03G3138 Fragaria x ananassa HOM05D008019 ORTHO05D010184 8.0e-39 164.1 100 68.0
Hund19732 Selenicereus undatus HOM05D008019 ORTHO05D010184 1.4e-35 153.3 76 82.9
ATR0605G214 Amborella trichopoda HOM05D008019 ORTHO05D010184 1.2e-34 150.2 77 80.5
Sc10g0000030 Simmondsia chinensis HOM05D008019 ORTHO05D010184 1.6e-31 139.8 106 60.4
Zm00001eb101810 Zea mays HOM05D008019 ORTHO05D010184 2.9e-28 129.0 86 61.6
Zm00001eb101800 Zea mays HOM05D008019 ORTHO05D010184 4.9e-28 128.3 86 60.5
Gohir.D12G096933 Gossypium hirsutum HOM05D008019 ORTHO05D010184 1.8e-22 109.8 64 73.4
SEGI_33125 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 1.3e-17 93.6 51 72.5
Medtr8g036830 Medicago truncatula HOM05D008019 ORTHO05D010184 4.7e-15 85.1 71 57.7
Lalb_Chr19g0132141 Lupinus albus HOM05D008019 ORTHO05D010184 5.2e-14 81.6 72 58.3
SEGI_37443 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 1.8e-06 56.6 38 55.3


User provided reference genes

Program Settings