Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.011G204466 Phaseolus vulgaris HOM05D007875 ORTHO05D011044 1.2e-30 135.6 58 100.0
Phvul.011G204600 Phaseolus vulgaris HOM05D007875 ORTHO05D011044 1.2e-30 135.6 58 100.0
Phvul.011G203800 Phaseolus vulgaris HOM05D007875 ORTHO05D011044 3.7e-27 124.0 58 89.7
Phvul.011G203700 Phaseolus vulgaris HOM05D007875 ORTHO05D011044 8.3e-27 122.9 58 91.4
Phvul.011G204000 Phaseolus vulgaris HOM05D007875 ORTHO05D011044 8.3e-27 122.9 58 91.4
Phvul.011G205200 Phaseolus vulgaris HOM05D007875 ORTHO05D011044 1.4e-26 122.1 58 89.7
Phvul.011G205000 Phaseolus vulgaris HOM05D007875 ORTHO05D011044 7.0e-26 119.8 58 87.9
Phvul.011G205600 Phaseolus vulgaris HOM05D007875 ORTHO05D011044 9.2e-26 119.4 57 89.5
Glyma.13G194300 Glycine max HOM05D007875 ORTHO05D011044 1.2e-25 119.0 58 86.2
Phvul.011G205500 Phaseolus vulgaris HOM05D007875 ORTHO05D011044 2.7e-25 117.9 57 87.7
Glyma.13G194400 Glycine max HOM05D007875 ORTHO05D011044 4.6e-25 117.1 58 84.5
Phvul.011G204700 Phaseolus vulgaris HOM05D007875 ORTHO05D011044 5.9e-25 116.7 58 86.2
Phvul.011G205300 Phaseolus vulgaris HOM05D007875 ORTHO05D011044 1.0e-24 115.9 57 86.0
Phvul.011G205400 Phaseolus vulgaris HOM05D007875 ORTHO05D011044 1.0e-24 115.9 57 86.0
Phvul.011G204100 Phaseolus vulgaris HOM05D007875 ORTHO05D011044 1.3e-24 115.5 58 84.5
Phvul.011G205100 Phaseolus vulgaris HOM05D007875 ORTHO05D011044 1.3e-24 115.5 57 86.0
Phvul.011G204200 Phaseolus vulgaris HOM05D007875 ORTHO05D011044 1.7e-24 115.2 57 86.0
Phvul.011G204400 Phaseolus vulgaris HOM05D007875 ORTHO05D011044 6.6e-24 113.2 58 82.8
Phvul.011G203600 Phaseolus vulgaris HOM05D007875 ORTHO05D011044 8.6e-24 112.8 58 79.3
Phvul.011G203900 Phaseolus vulgaris HOM05D007875 ORTHO05D011044 8.6e-24 112.8 58 84.5
Phvul.011G204300 Phaseolus vulgaris HOM05D007875 ORTHO05D011044 1.1e-23 112.5 58 86.2
VMungo1127G0599 Vigna mungo HOM05D007875 ORTHO05D011044 1.5e-23 112.1 55 85.5
VMungo1127G1050 Vigna mungo HOM05D007875 ORTHO05D011044 2.1e-22 108.2 58 81.0
Phvul.011G204800 Phaseolus vulgaris HOM05D007875 ORTHO05D011044 6.2e-22 106.7 58 77.6
Phvul.011G204900 Phaseolus vulgaris HOM05D007875 ORTHO05D011044 2.0e-20 101.7 52 86.5
Glyma.08G230700 Glycine max HOM05D007875 ORTHO05D011044 4.9e-19 97.1 58 69.0
TPR.G4961 Trifolium pratense HOM05D007875 ORTHO05D011044 9.5e-15 82.8 66 53.0
Medtr3g436100 Medicago truncatula HOM05D007875 ORTHO05D012686 1.4e-13 79.0 48 66.7
Medtr6g017170 Medicago truncatula HOM05D007875 ORTHO05D011044 1.4e-13 79.0 48 64.6
Medtr7g044980 Medicago truncatula HOM05D007875 ORTHO05D030141 8.9e-13 76.3 48 58.3
Psat7g236240 Pisum sativum HOM05D007875 ORTHO05D012686 8.9e-13 76.3 47 59.6
Medtr8g022400 Medicago truncatula HOM05D007875 ORTHO05D011044 2.0e-12 75.1 48 60.4
Medtr8g022420 Medicago truncatula HOM05D007875 ORTHO05D011044 2.6e-12 74.7 48 60.4
TPR.G14534 Trifolium pratense HOM05D007875 ORTHO05D011044 3.4e-12 74.3 48 58.3
Medtr8g022430 Medicago truncatula HOM05D007875 ORTHO05D011044 4.4e-12 73.9 48 58.3
Psat6g224160 Pisum sativum HOM05D007875 ORTHO05D012686 4.4e-12 73.9 51 56.9
Medtr7g044920 Medicago truncatula HOM05D007875 ORTHO05D030141 9.8e-12 72.8 48 58.3
Medtr3g067500 Medicago truncatula HOM05D007875 ORTHO05D012686 1.7e-11 72.0 47 59.6
Medtr6g017150 Medicago truncatula HOM05D007875 ORTHO05D011044 1.7e-11 72.0 44 63.6
Psat3g032720 Pisum sativum HOM05D007875 ORTHO05D011044 1.7e-11 72.0 44 59.1
Medtr3g067437 Medicago truncatula HOM05D007875 ORTHO05D012686 2.2e-11 71.6 47 59.6
Psat1g073640 Pisum sativum HOM05D007875 ORTHO05D011044 6.4e-11 70.1 42 64.3
Psat1g073720 Pisum sativum HOM05D007875 ORTHO05D011044 6.4e-11 70.1 42 64.3
Psat1g073800 Pisum sativum HOM05D007875 ORTHO05D011044 6.4e-11 70.1 42 64.3
Medtr3g463570 Medicago truncatula HOM05D007875 ORTHO05D266950 1.1e-10 69.3 44 54.5
Medtr3g067570 Medicago truncatula HOM05D007875 ORTHO05D012686 1.4e-10 68.9 42 61.9
Psat1g073600 Pisum sativum HOM05D007875 ORTHO05D011044 3.2e-10 67.8 42 61.9
Psat1g073760 Pisum sativum HOM05D007875 ORTHO05D011044 3.2e-10 67.8 42 61.9
Medtr3g067430 Medicago truncatula HOM05D007875 ORTHO05D012686 4.1e-10 67.4 43 58.1
Medtr4g026590 Medicago truncatula HOM05D007875 ORTHO05D012686 4.1e-10 67.4 47 59.6
Medtr3g067445 Medicago truncatula HOM05D007875 ORTHO05D012686 7.1e-10 66.6 43 58.1
Medtr3g067270 Medicago truncatula HOM05D007875 ORTHO05D012686 1.6e-09 65.5 43 62.8
Medtr3g067280 Medicago truncatula HOM05D007875 ORTHO05D012686 1.6e-09 65.5 43 62.8
Medtr3g467750 Medicago truncatula HOM05D007875 ORTHO05D012686 1.6e-09 65.5 43 62.8
Medtr3g467760 Medicago truncatula HOM05D007875 ORTHO05D012686 1.6e-09 65.5 43 62.8
Medtr6g036620 Medicago truncatula HOM05D007875 ORTHO05D012686 2.7e-09 64.7 48 58.3
Medtr7g056817 Medicago truncatula HOM05D007875 ORTHO05D022923 3.5e-09 64.3 48 52.1
Medtr3g067540 Medicago truncatula HOM05D007875 ORTHO05D012686 6.0e-09 63.5 47 53.2
Medtr3g067550 Medicago truncatula HOM05D007875 ORTHO05D012686 6.0e-09 63.5 47 53.2
Medtr3g067555 Medicago truncatula HOM05D007875 ORTHO05D012686 6.0e-09 63.5 47 53.2
Medtr3g067580 Medicago truncatula HOM05D007875 ORTHO05D012686 1.3e-08 62.4 56 48.2
Medtr3g067535 Medicago truncatula HOM05D007875 ORTHO05D012686 1.7e-08 62.0 47 55.3
TPR.G31305 Trifolium pratense HOM05D007875 ORTHO05D030141 1.7e-08 62.0 47 48.9
Medtr6g047900 Medicago truncatula HOM05D007875 ORTHO05D022923 2.3e-08 61.6 41 58.5
Medtr1g019650 Medicago truncatula HOM05D007875 ORTHO05D022923 3.0e-08 61.2 42 57.1
Medtr7g056803 Medicago truncatula HOM05D007875 ORTHO05D012686 3.9e-08 60.8 46 54.3
Medtr8g461020 Medicago truncatula HOM05D007875 ORTHO05D267263 3.9e-08 60.8 43 53.5
Medtr3g067510 Medicago truncatula HOM05D007875 ORTHO05D012686 5.1e-08 60.5 43 55.8
Medtr8g056800 Medicago truncatula HOM05D007875 ORTHO05D030141 1.9e-07 58.5 43 48.8
Medtr6g047880 Medicago truncatula HOM05D007875 ORTHO05D022923 5.6e-07 57.0 40 57.5
Psat1g073680 Pisum sativum HOM05D007875 ORTHO05D011044 9.5e-07 56.2 67 40.3
Medtr7g029540 Medicago truncatula HOM05D007875 ORTHO05D022923 8.1e-06 53.1 45 53.3


User provided reference genes

Program Settings