Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G073900 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 1.6e-205 719.2 362 100.0
VMungo1309G0435 Vigna mungo HOM05D006874 ORTHO05D008334 2.6e-155 552.4 363 79.6
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 1.5e-126 456.8 387 66.9
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 1.7e-56 224.2 381 41.2
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 7.2e-52 208.8 376 41.5
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 2.6e-49 200.3 394 40.4
Psat5g037000 Pisum sativum HOM05D006874 ORTHO05D008334 7.4e-49 198.7 374 40.9
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 3.1e-47 193.4 368 39.9
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 1.2e-46 191.4 377 39.5
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 3.3e-41 173.3 366 35.5
VMungo0540G0572 Vigna mungo HOM05D001259 ORTHO05D008334 1.2e-38 164.9 114 74.6
TPR.G13116 Trifolium pratense HOM05D006874 ORTHO05D008334 7.2e-36 155.6 364 34.6
Lj5g0027457 Lotus japonicus HOM05D006874 ORTHO05D008334 8.8e-34 148.7 368 35.6
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 8.2e-32 142.1 381 30.7
Psat6g017400 Pisum sativum HOM05D006874 ORTHO05D008334 1.6e-30 137.9 366 31.7
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 1.7e-29 134.4 378 31.7
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 1.7e-29 134.4 381 30.4
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 3.8e-29 133.3 388 32.5
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 5.5e-28 129.4 387 31.8
Phvul.001G029700 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 2.7e-27 127.1 385 30.4
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 4.4e-25 119.8 403 30.3
arahy.Tifrunner.gnm1.ann1.0IC8QA Arachis hypogaea HOM05D006874 ORTHO05D008334 5.7e-25 119.4 266 38.0
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 3.7e-24 116.7 384 30.5
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 3.7e-24 116.7 401 28.2
VMungo0647G0698 Vigna mungo HOM05D006874 ORTHO05D008334 8.3e-24 115.5 375 28.8
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 3.5e-22 110.2 402 28.6
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 1.0e-21 108.6 388 30.9
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 1.0e-21 108.6 388 30.9
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 1.3e-21 108.2 371 27.5
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 1.7e-21 107.8 378 30.2
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 3.8e-21 106.7 371 28.0
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 1.9e-20 104.4 371 28.3
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 1.9e-20 104.4 391 29.7
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 4.2e-20 103.2 392 28.3
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 2.1e-19 100.9 388 29.4
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 8.0e-19 99.0 384 27.9
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 1.8e-18 97.8 387 28.9
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 5.2e-18 96.3 368 29.3
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 8.9e-18 95.5 378 26.7
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 1.5e-17 94.7 362 29.3
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 2.0e-17 94.4 390 28.5
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 4.4e-17 93.2 373 28.2
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 4.4e-17 93.2 371 29.9
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 1.3e-16 91.7 399 28.1
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.7e-16 91.3 382 29.1
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 2.2e-16 90.9 395 27.1
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 4.9e-16 89.7 371 27.8
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.1e-15 88.6 385 29.1
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 1.1e-15 88.6 377 27.6
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 7.0e-15 85.9 376 26.9
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.2e-14 85.1 389 28.0
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 2.0e-14 84.3 316 26.9
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 2.0e-14 84.3 405 26.7
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 2.0e-14 84.3 372 29.0
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 2.7e-14 84.0 385 29.1
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 2.7e-14 84.0 382 27.2
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 5.9e-14 82.8 371 28.8
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 7.8e-14 82.4 384 28.6
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 1.3e-13 81.6 362 26.0
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 3.8e-13 80.1 398 27.9
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 5.0e-13 79.7 363 27.5
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 5.0e-13 79.7 378 27.8
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 8.6e-13 79.0 382 29.1
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 8.6e-13 79.0 374 28.9
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 1.5e-12 78.2 378 27.0
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 3.3e-12 77.0 346 26.6
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 4.3e-12 76.6 373 27.1
arahy.Tifrunner.gnm1.ann1.WJQ75P Arachis hypogaea HOM05D006874 ORTHO05D008334 5.6e-12 76.3 184 35.3
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 5.6e-12 76.3 369 26.8
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 7.3e-12 75.9 418 27.0
TPR.G30198 Trifolium pratense HOM05D006874 ORTHO05D008334 1.6e-11 74.7 423 25.5
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 4.7e-11 73.2 376 26.6
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 8.9e-10 68.9 350 26.9
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 2.0e-09 67.8 390 26.2
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 4.4e-09 66.6 373 25.7
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 7.5e-09 65.9 373 25.5
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 7.5e-09 65.9 373 25.5
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 9.8e-09 65.5 371 25.1
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 2.2e-08 64.3 354 24.6
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 3.7e-08 63.5 365 26.3
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 4.9e-08 63.2 387 24.5
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 8.3e-08 62.4 365 25.8
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 1.9e-07 61.2 385 23.9
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 3.2e-07 60.5 354 25.7
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 7.0e-07 59.3 119 39.5
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 7.0e-07 59.3 378 24.1
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 9.2e-07 58.9 143 33.6
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 2.0e-06 57.8 415 25.3
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 4.6e-06 56.6 368 24.5


User provided reference genes

Program Settings