Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G150500 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 8.1e-51 203.4 97 100.0
arahy.Tifrunner.gnm1.ann1.DMW7HF Arachis hypogaea HOM05D005573 ORTHO05D007161 5.2e-42 174.1 94 86.2
Medtr4g051220 Medicago truncatula HOM05D005573 ORTHO05D007161 1.3e-40 169.5 94 85.1
Nn1g10181 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.3e-40 169.5 94 81.9
Nn1g10183 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.3e-40 169.5 94 81.9
Nn2g13212 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.3e-40 169.5 94 81.9
Nn423s46610 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.3e-40 169.5 94 81.9
Hma1.2p1_0248F.1_g102160 Hydrangea macrophylla HOM05D005573 ORTHO05D007161 1.7e-40 169.1 94 81.9
PGR111G0074 Punica granatum HOM05D005573 ORTHO05D007161 2.2e-40 168.7 94 79.8
Lalb_Chr15g0080691 Lupinus albus HOM05D005573 ORTHO05D007161 6.4e-40 167.2 93 83.9
CAN.G1478.12 Capsicum annuum HOM05D005573 ORTHO05D007161 1.1e-39 166.4 94 81.9
CAN.G551.66 Capsicum annuum HOM05D005573 ORTHO05D007161 1.1e-39 166.4 94 81.9
CAN.G65.126 Capsicum annuum HOM05D005573 ORTHO05D007161 1.1e-39 166.4 94 81.9
Migut.D01426 Erythranthe guttata HOM05D005573 ORTHO05D007161 1.4e-39 166.0 94 80.9
Nn6g33243 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.9e-39 165.6 94 79.8
CAN.G1183.7 Capsicum annuum HOM05D005573 ORTHO05D007161 3.2e-39 164.9 94 80.9
LjContig00318g0014176 Lotus japonicus HOM05D005573 ORTHO05D007161 3.2e-39 164.9 94 81.9
Potri.013G163300 Populus trichocarpa HOM05D005573 ORTHO05D007161 4.2e-39 164.5 94 78.7
Lsat_1_v5_gn_3_99201 Lactuca sativa HOM05D005573 ORTHO05D007161 7.1e-39 163.7 94 79.8
PSO548G0019 Papaver somniferum HOM05D005573 ORTHO05D007161 1.6e-38 162.5 94 79.8
PGSC0003DMG400024039 Solanum tuberosum HOM05D005573 ORTHO05D007161 2.1e-38 162.2 94 79.8
HanXRQChr02g0041471 Helianthus annuus HOM05D005573 ORTHO05D007161 2.7e-38 161.8 94 78.7
HanXRQChr02g0044961 Helianthus annuus HOM05D005573 ORTHO05D007161 2.7e-38 161.8 94 78.7
HanXRQChr07g0201021 Helianthus annuus HOM05D005573 ORTHO05D007161 2.7e-38 161.8 94 78.7
HanXRQChr08g0210291 Helianthus annuus HOM05D005573 ORTHO05D007161 2.7e-38 161.8 94 78.7
HanXRQChr10g0289201 Helianthus annuus HOM05D005573 ORTHO05D007161 2.7e-38 161.8 94 78.7
HanXRQChr11g0326731 Helianthus annuus HOM05D005573 ORTHO05D007161 2.7e-38 161.8 94 78.7
HanXRQChr13g0413641 Helianthus annuus HOM05D005573 ORTHO05D007161 2.7e-38 161.8 94 78.7
HanXRQChr13g0413711 Helianthus annuus HOM05D005573 ORTHO05D007161 2.7e-38 161.8 94 78.7
HanXRQChr13g0413781 Helianthus annuus HOM05D005573 ORTHO05D007161 2.7e-38 161.8 94 78.7
HanXRQChr13g0413861 Helianthus annuus HOM05D005573 ORTHO05D007161 2.7e-38 161.8 94 78.7
HanXRQChr13g0413931 Helianthus annuus HOM05D005573 ORTHO05D007161 2.7e-38 161.8 94 78.7
HanXRQCPg0579941 Helianthus annuus HOM05D005573 ORTHO05D007161 2.7e-38 161.8 94 78.7
Nn5g30925 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.7e-38 161.8 89 83.1
CAN.G129.6 Capsicum annuum HOM05D005573 ORTHO05D007161 6.0e-38 160.6 94 79.8
Eucgr.B02956 Eucalyptus grandis HOM05D005573 ORTHO05D007161 6.0e-38 160.6 94 73.4
SalBow1G4134 Salvia bowleyana HOM05D005573 ORTHO05D007161 7.8e-38 160.2 94 77.7
TWI60G0396 Tripterygium wilfordii HOM05D005573 ORTHO05D007161 2.3e-37 158.7 93 77.4
Gohir.A08G157500 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.9e-37 157.9 94 76.6
Gohir.A10G100366 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.9e-37 157.9 94 76.6
Sed0002328 Sechium edule HOM05D005573 ORTHO05D007161 1.5e-36 156.0 94 75.5
Sed0008322 Sechium edule HOM05D005573 ORTHO05D007161 1.5e-36 156.0 94 75.5
Lj2P1237T91 Lonicera japonica HOM05D005573 ORTHO05D007161 1.9e-36 155.6 96 76.0
Lj2P1239T179 Lonicera japonica HOM05D005573 ORTHO05D007161 1.9e-36 155.6 96 76.0
Oeu012806.1 Olea europaea HOM05D005573 ORTHO05D007161 1.9e-36 155.6 90 78.9
Solyc09g015310.3 Solanum lycopersicum HOM05D005573 ORTHO05D007161 2.5e-36 155.2 96 74.0
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 4.3e-36 154.5 94 76.6
CAN.G100.47 Capsicum annuum HOM05D005573 ORTHO05D007161 4.3e-36 154.5 93 77.4
AL2G20730 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 5.6e-36 154.1 94 76.6
AL2G21420 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 5.6e-36 154.1 94 76.6
ATCG00380 Arabidopsis thaliana HOM05D005573 ORTHO05D007161 5.6e-36 154.1 94 76.6
CARHR282030 Cardamine hirsuta HOM05D005573 ORTHO05D007161 5.6e-36 154.1 94 76.6
DCAR_032486 Daucus carota HOM05D005573 ORTHO05D007161 9.6e-36 153.3 94 73.4
Glyma.01G153400 Glycine max HOM05D005573 ORTHO05D007161 1.3e-35 152.9 78 89.7
A06p23260 Brassica napus HOM05D005573 ORTHO05D007161 1.6e-35 152.5 94 75.5
BNapus_Darmor_BZH_scaffold_287p00070 Brassica napus HOM05D005573 ORTHO05D007161 1.6e-35 152.5 94 75.5
BolSC45t60866H Brassica oleracea HOM05D005573 ORTHO05D007161 1.6e-35 152.5 94 75.5
BolSC45t60946H Brassica oleracea HOM05D005573 ORTHO05D007161 1.6e-35 152.5 94 75.5
BolSC46t60993H Brassica oleracea HOM05D005573 ORTHO05D007161 1.6e-35 152.5 94 75.5
BolSC46t61042H Brassica oleracea HOM05D005573 ORTHO05D007161 1.6e-35 152.5 94 75.5
BolSC49t61189H Brassica oleracea HOM05D005573 ORTHO05D007161 1.6e-35 152.5 94 75.5
BraA06t25428Z Brassica rapa HOM05D005573 ORTHO05D007161 1.6e-35 152.5 94 75.5
BraSC140t45578Z Brassica rapa HOM05D005573 ORTHO05D007161 1.6e-35 152.5 94 75.5
BraSC151t45711Z Brassica rapa HOM05D005573 ORTHO05D007161 1.6e-35 152.5 94 75.5
BraSC25t45875Z Brassica rapa HOM05D005573 ORTHO05D007161 1.6e-35 152.5 94 75.5
Gohir.A07G163636 Gossypium hirsutum HOM05D005573 ORTHO05D007161 2.8e-35 151.8 94 74.5
Zm00001eb039080 Zea mays HOM05D005573 ORTHO05D007161 4.0e-34 147.9 94 72.3
Zm00001eb039210 Zea mays HOM05D005573 ORTHO05D007161 4.0e-34 147.9 94 72.3
Zm00001eb435020 Zea mays HOM05D005573 ORTHO05D007161 4.0e-34 147.9 94 72.3
Zm00001eb435220 Zea mays HOM05D005573 ORTHO05D007161 4.0e-34 147.9 94 72.3
Zm00001eb435420 Zea mays HOM05D005573 ORTHO05D007161 4.0e-34 147.9 94 72.3
Zm00001eb435680 Zea mays HOM05D005573 ORTHO05D007161 4.0e-34 147.9 94 72.3
Zm00001eb438350 Zea mays HOM05D005573 ORTHO05D007161 4.0e-34 147.9 94 72.3
Zm00001eb440990 Zea mays HOM05D005573 ORTHO05D007161 4.0e-34 147.9 94 72.3
Thhalv10010766m.g Eutrema salsugineum HOM05D005573 ORTHO05D007161 2.0e-33 145.6 94 74.5
Solyc09g015330.2 Solanum lycopersicum HOM05D005573 ORTHO05D007161 6.4e-32 140.6 96 69.8
Gohir.D04G083800 Gossypium hirsutum HOM05D005573 ORTHO05D007161 9.3e-31 136.7 84 77.4
Lj4g0013543 Lotus japonicus HOM05D005573 ORTHO05D007161 3.5e-30 134.8 94 70.2
Oeu056456.1 Olea europaea HOM05D005573 ORTHO05D007161 5.3e-26 120.9 66 81.8
Gorai.006G201300 Gossypium raimondii HOM05D005573 ORTHO05D007161 1.7e-24 115.9 74 70.3
arahy.Tifrunner.gnm1.ann1.NAZW4C Arachis hypogaea HOM05D005573 ORTHO05D007161 4.9e-24 114.4 96 61.5
Gohir.D09G179300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 6.4e-24 114.0 74 68.9
CDE08G0454 Ceratophyllum demersum HOM05D000219 ORTHO05D000226 1.9e-23 112.5 68 70.6
CAN.G653.3 Capsicum annuum HOM05D005573 ORTHO05D007161 4.2e-23 111.3 63 82.5
Medtr0002s0590 Medicago truncatula HOM05D005573 ORTHO05D007161 5.5e-23 110.9 75 64.0
SEGI_18745 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 9.3e-23 110.2 95 56.8
EL10As12g24021 Beta vulgaris HOM05D005573 ORTHO05D007161 1.6e-22 109.4 88 56.8
CAN.G63.13 Capsicum annuum HOM05D005573 ORTHO05D007161 3.5e-22 108.2 68 70.6
TAR625G0941 Trochodendron aralioides HOM05D005573 ORTHO05D007161 3.5e-22 108.2 63 74.6
Zm00001eb434930 Zea mays HOM05D005573 ORTHO05D007161 3.0e-21 105.1 70 67.1
Zm00001eb231240 Zea mays HOM05D005573 ORTHO05D007161 5.1e-21 104.4 70 65.7
CAN.G331.1 Capsicum annuum HOM05D005573 ORTHO05D007161 5.6e-20 100.9 64 70.3
Zm00001eb039100 Zea mays HOM05D005573 ORTHO05D007161 1.3e-19 99.8 65 69.2
Gohir.A09G045446 Gossypium hirsutum HOM05D005573 ORTHO05D007161 7.6e-17 90.5 55 72.7
Solyc11g022620.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 2.9e-16 88.6 55 70.9
CiPaw.12G056900 Carya illinoinensis HOM05D005573 ORTHO05D007161 4.9e-16 87.8 67 59.7
TAR375G0006 Trochodendron aralioides HOM05D005573 ORTHO05D007161 4.2e-15 84.7 53 69.8
Nitab4.5_0000261g0250 Nicotiana tabacum HOM05D005573 ORTHO05D007161 1.6e-14 82.8 42 88.1
C09p29560 Brassica napus HOM05D005573 ORTHO05D007161 4.6e-14 81.3 51 74.5
BolSC29t60458H Brassica oleracea HOM05D005573 ORTHO05D007161 4.6e-14 81.3 51 74.5
BolSC47t61104H Brassica oleracea HOM05D005573 ORTHO05D007161 4.6e-14 81.3 51 74.5
HanXRQChr00c0345g0573881 Helianthus annuus HOM05D005573 ORTHO05D007161 1.8e-13 79.3 48 72.9
HanXRQChr13g0413681 Helianthus annuus HOM05D005573 ORTHO05D029920 1.8e-13 79.3 44 79.5
HanXRQChr13g0413751 Helianthus annuus HOM05D005573 ORTHO05D029920 1.8e-13 79.3 44 79.5
HanXRQChr13g0413831 Helianthus annuus HOM05D005573 ORTHO05D029920 1.8e-13 79.3 44 79.5
HanXRQChr13g0413901 Helianthus annuus HOM05D005573 ORTHO05D029920 1.8e-13 79.3 44 79.5
arahy.Tifrunner.gnm1.ann1.NT5R3P Arachis hypogaea HOM05D005573 ORTHO05D007161 2.3e-13 79.0 42 85.7
Migut.D01353 Erythranthe guttata HOM05D005573 ORTHO05D007161 5.1e-13 77.8 42 83.3
Oeu041772.1 Olea europaea HOM05D005573 ORTHO05D007161 6.7e-13 77.4 59 67.8
Lalb_Chr07g0191491 Lupinus albus HOM05D005573 ORTHO05D007161 2.5e-12 75.5 42 81.0
MELO3C027485.2 Cucumis melo HOM05D005573 ORTHO05D007161 3.3e-12 75.1 42 78.6
MELO3C022836.2 Cucumis melo HOM05D005573 ORTHO05D007161 1.3e-11 73.2 41 78.0
Nitab4.5_0006596g0030 Nicotiana tabacum HOM05D005573 ORTHO05D007161 1.6e-11 72.8 41 78.0
Gohir.A09G103300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 2.2e-11 72.4 41 75.6
BolC7t41664H Brassica oleracea HOM05D005573 ORTHO05D007161 4.8e-11 71.2 57 57.9
Nn055s41939 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.4e-10 69.7 36 86.1
Oeu052069.1 Olea europaea HOM05D005573 ORTHO05D007161 4.5e-09 64.7 90 43.3
Oeu042745.1 Olea europaea HOM05D005573 ORTHO05D007161 6.1e-06 54.3 34 70.6


User provided reference genes

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