Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G218000 Phaseolus vulgaris HOM05D007663 ORTHO05D009455 5.7e-74 280.8 138 100.0
Glyma.02G263600 Glycine max HOM05D007663 ORTHO05D009455 1.2e-36 156.8 107 76.6
VMungo0647G1650 Vigna mungo HOM05D007663 ORTHO05D009455 2.2e-25 119.4 110 62.7
TAR633G2105 Trochodendron aralioides HOM05D007663 ORTHO05D009455 6.3e-25 117.9 110 54.5
Cpa.g.sc65.132 Carica papaya HOM05D007663 ORTHO05D009455 4.3e-21 105.1 107 54.2
Phvul.006G152901 Phaseolus vulgaris HOM05D007663 ORTHO05D009455 1.6e-20 103.2 107 57.9
Phvul.008G221600 Phaseolus vulgaris HOM05D007663 ORTHO05D009455 4.4e-18 95.1 110 55.5
Os01g0829100 Oryza sativa ssp. japonica HOM05D007663 ORTHO05D009455 1.1e-16 90.5 109 44.0
LjContig00357g0015684 Lotus japonicus HOM05D007663 ORTHO05D009455 3.9e-14 82.0 85 56.5
arahy.Tifrunner.gnm1.ann1.CJK2YY Arachis hypogaea HOM05D007663 ORTHO05D009455 7.3e-13 77.8 59 61.0
arahy.Tifrunner.gnm1.ann1.QDW8X7 Arachis hypogaea HOM05D007663 ORTHO05D009455 7.3e-13 77.8 59 61.0
Rhsim03G0146000 Rhododendron simsii HOM05D007663 ORTHO05D009455 2.8e-12 75.9 68 52.9
TWI73G0671 Tripterygium wilfordii HOM05D007663 ORTHO05D009455 2.8e-12 75.9 114 41.2
Lalb_Chr04g0250441 Lupinus albus HOM05D007663 ORTHO05D009455 1.2e-10 70.5 59 62.7
vmacro17693 Vaccinium macrocarpon HOM05D007663 ORTHO05D009455 1.5e-10 70.1 68 50.0
DCAR_010462 Daucus carota HOM05D007663 ORTHO05D009455 5.8e-10 68.2 109 36.7
Zm00001eb368510 Zea mays HOM05D007663 ORTHO05D009455 2.9e-09 65.9 109 36.7
CSS0001014 Camellia sinensis var. sinensis HOM05D007663 ORTHO05D009455 4.1e-08 62.0 74 48.6
CSS0017188 Camellia sinensis var. sinensis HOM05D007663 ORTHO05D009455 4.1e-08 62.0 74 48.6
PSO478G4273 Papaver somniferum HOM05D001789 ORTHO05D001755 5.4e-08 61.6 113 34.5
vmacro06952 Vaccinium macrocarpon HOM05D007663 ORTHO05D009455 5.4e-08 61.6 92 38.0
Ca_05987_v3 Cicer arietinum L. HOM05D007663 ORTHO05D009455 7.1e-08 61.2 62 51.6
HanXRQChr14g0459391 Helianthus annuus HOM05D007663 ORTHO05D009455 9.2e-08 60.8 67 49.3
Medtr8g056020 Medicago truncatula HOM05D007663 ORTHO05D009455 1.2e-07 60.5 61 55.7
TPR.G38411 Trifolium pratense HOM05D007663 ORTHO05D009455 1.6e-07 60.1 58 55.2
Dinv21764 Davidia involucrata HOM05D007663 ORTHO05D009455 4.6e-07 58.5 55 52.7
MCO13G240 Micromonas commoda HOM05D001854 ORTHO05D001800 6.0e-07 58.2 101 33.7
Nn2g10961 Nelumbo nucifera HOM05D007663 ORTHO05D009455 7.8e-07 57.8 53 52.8
Cre06.g283300 Chlamydomonas reinhardtii HOM05D005036 ORTHO05D005881 1.7e-06 56.6 100 31.0
Gohir.D04G070200 Gossypium hirsutum HOM05D007663 ORTHO05D009455 2.3e-06 56.2 61 44.3
Duzib128G1882 Durio zibethinus HOM05D007663 ORTHO05D009455 3.0e-06 55.8 59 45.8
PSO017G0677 Papaver somniferum HOM05D001789 ORTHO05D001755 3.0e-06 55.8 66 43.9
QL08p063638 Quercus lobata HOM05D007663 ORTHO05D009455 3.0e-06 55.8 55 49.1
GSVIVG01032765001 Vitis vinifera HOM05D007663 ORTHO05D009455 3.9e-06 55.5 54 50.0
Psat2g031520 Pisum sativum HOM05D007663 ORTHO05D009455 5.1e-06 55.1 58 50.0
Aqoxy2G00815 Aquilegia oxysepala HOM05D007663 ORTHO05D009455 6.6e-06 54.7 56 46.4
Manes.11G152170 Manihot esculenta HOM05D007663 ORTHO05D009455 8.6e-06 54.3 63 41.3
Manes.11G152176 Manihot esculenta HOM05D007663 ORTHO05D009455 8.6e-06 54.3 63 41.3


User provided reference genes

Program Settings