Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G104500 Phaseolus vulgaris HOM05D005926 ORTHO05D007001 0.0e+00 1263.8 653 100.0
VMungo0720G0267 Vigna mungo HOM05D005926 ORTHO05D007001 2.1e-291 1005.4 611 87.2
Glyma.20G187800 Glycine max HOM05D005926 ORTHO05D007001 3.8e-269 931.4 661 76.6
Glyma.10G202600 Glycine max HOM05D005926 ORTHO05D007001 3.3e-265 918.3 684 74.3
Lj5g0002236 Lotus japonicus HOM05D005926 ORTHO05D007001 1.2e-222 776.9 669 67.1
Ca_10497_v3 Cicer arietinum L. HOM05D005926 ORTHO05D007001 1.2e-219 766.9 666 65.5
Medtr1g492840 Medicago truncatula HOM05D005926 ORTHO05D007001 9.1e-215 750.7 665 64.2
Psat6g176680 Pisum sativum HOM05D005926 ORTHO05D007001 1.3e-205 720.3 720 59.7
TPR.G2562 Trifolium pratense HOM05D005926 ORTHO05D007001 1.3e-200 703.7 643 63.6
Lalb_Chr03g0036371 Lupinus albus HOM05D005926 ORTHO05D007001 6.9e-162 575.1 668 55.2
arahy.Tifrunner.gnm1.ann1.J9ASUV Arachis hypogaea HOM05D005926 ORTHO05D007001 2.5e-132 476.9 670 49.4
QL04p042256 Quercus lobata HOM05D005926 ORTHO05D007001 1.5e-119 434.5 675 45.8
Duzib128G1763 Durio zibethinus HOM05D005926 ORTHO05D007001 2.2e-112 410.6 703 42.5
Prupe.2G085400 Prunus persica HOM05D005926 ORTHO05D007001 4.2e-111 406.4 727 42.5
MD02G1248000 Malus domestica HOM05D005926 ORTHO05D007001 9.4e-111 405.2 598 47.0
Manes.07G090100 Manihot esculenta HOM05D005926 ORTHO05D007001 4.7e-110 402.9 683 42.2
arahy.Tifrunner.gnm1.ann1.9BC44J Arachis hypogaea HOM05D005926 ORTHO05D007001 1.5e-108 397.9 603 47.3
COL.COLO4_06813 Corchorus olitorius HOM05D005926 ORTHO05D007001 1.6e-105 387.9 692 43.6
Duzib106G0448 Durio zibethinus HOM05D005926 ORTHO05D007001 1.7e-104 384.4 716 41.1
Thecc.10G111000 Theobroma cacao HOM05D005926 ORTHO05D007001 1.9e-103 380.9 705 42.0
Gohir.A05G398500 Gossypium hirsutum HOM05D005926 ORTHO05D007001 7.2e-103 379.0 758 40.5
Gohir.D04G017400 Gossypium hirsutum HOM05D005926 ORTHO05D007001 7.2e-103 379.0 755 40.7
MD07G1068100 Malus domestica HOM05D005926 ORTHO05D007001 9.4e-103 378.6 548 46.7
CiPaw.14G029200 Carya illinoinensis HOM05D005926 ORTHO05D007001 8.0e-102 375.6 713 40.7
Ciclev10030805m.g Citrus clementina HOM05D005926 ORTHO05D007001 8.0e-102 375.6 675 42.5
Gorai.012G020100 Gossypium raimondii HOM05D005926 ORTHO05D007001 2.3e-101 374.0 759 40.3
FAN10G2760 Fragaria x ananassa HOM05D005926 ORTHO05D007001 3.0e-101 373.6 609 43.8
FvH4_7g05860 Fragaria vesca HOM05D005926 ORTHO05D007001 1.5e-100 371.3 578 44.8
Atru.chr12.975 Acer truncatum HOM05D005926 ORTHO05D007001 4.4e-100 369.8 692 41.0
TWI63G0673 Tripterygium wilfordii HOM05D005926 ORTHO05D007001 4.9e-99 366.3 677 41.9
FAN03G1852 Fragaria x ananassa HOM05D005926 ORTHO05D007001 7.0e-98 362.5 578 45.2
Sabra10G0182600 Salix brachista HOM05D005926 ORTHO05D007001 9.1e-98 362.1 762 37.7
Potri.008G025000 Populus trichocarpa HOM05D005926 ORTHO05D007001 2.0e-97 360.9 699 40.2
GSVIVG01034734001 Vitis vinifera HOM05D005926 ORTHO05D007001 1.0e-96 358.6 714 38.0
Dinv30648 Davidia involucrata HOM05D005926 ORTHO05D007001 3.3e-95 353.6 773 36.6
RcHm_v2.0_Chr1g0333121 Rosa chinensis HOM05D005926 ORTHO05D007001 3.3e-95 353.6 601 43.3
CsaV3_6G004110 Cucumis sativus L. HOM05D005926 ORTHO05D007001 4.2e-95 353.2 686 40.7
ClCG08G008140 Citrullus lanatus HOM05D005926 ORTHO05D007001 7.2e-95 352.4 683 40.7
CANSAT56G4130 Cannabis sativa HOM05D005926 ORTHO05D007001 2.8e-94 350.5 663 40.7
TAR623G1319 Trochodendron aralioides HOM05D005926 ORTHO05D007001 4.0e-93 346.7 696 38.2
Sabra08G0016800 Salix brachista HOM05D005926 ORTHO05D007001 1.2e-92 345.1 675 40.1
MELO3C019887.2 Cucumis melo HOM05D005926 ORTHO05D007001 1.8e-90 337.8 710 39.2
Cc02_g10060 Coffea canephora HOM05D005926 ORTHO05D007001 1.7e-88 331.3 687 37.8
Rhsim03G0105700 Rhododendron simsii HOM05D005926 ORTHO05D007001 9.5e-87 325.5 693 37.5
Lj2C28T9 Lonicera japonica HOM05D005926 ORTHO05D007001 1.3e-83 315.1 606 40.8
Eucgr.G02709 Eucalyptus grandis HOM05D005926 ORTHO05D007001 4.9e-83 313.2 571 41.5
PGR142G4330 Punica granatum HOM05D005926 ORTHO05D007001 6.6e-80 302.8 662 38.1
vmacro07227 Vaccinium macrocarpon HOM05D005926 ORTHO05D007001 1.1e-79 302.0 694 37.2
Actinidia18581 Actinidia chinensis HOM05D005926 ORTHO05D007001 9.5e-79 298.9 712 35.4
CSS0031564 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 9.5e-79 298.9 692 37.0
Cpa.g.sc19.23 Carica papaya HOM05D005926 ORTHO05D007001 1.2e-78 298.5 825 34.7
CSS0031315 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 9.2e-74 282.3 684 35.5
Nn2g14047 Nelumbo nucifera HOM05D005926 ORTHO05D007001 9.2e-74 282.3 640 35.5
Sed0009709 Sechium edule HOM05D005926 ORTHO05D007001 6.0e-73 279.6 664 36.0
Peaxi162Scf00004g00119 Petunia axillaris HOM05D005926 ORTHO05D007001 1.9e-71 274.6 687 35.5
TAR636G3019 Trochodendron aralioides HOM05D005926 ORTHO05D007001 4.3e-71 273.5 630 36.2
Sc06g0002210 Simmondsia chinensis HOM05D005926 ORTHO05D007001 1.6e-70 271.6 688 34.7
SalBow6G1645 Salvia bowleyana HOM05D005926 ORTHO05D007001 3.1e-69 267.3 672 36.6
Haze_02593 Corylus avellana HOM05D005926 ORTHO05D007001 2.9e-67 260.8 297 54.5
PGSC0003DMG400023487 Solanum tuberosum HOM05D005926 ORTHO05D007001 1.9e-66 258.1 686 35.0
TAR369G1114 Trochodendron aralioides HOM05D005926 ORTHO05D007001 2.4e-66 257.7 780 32.4
Hma1.2p1_0010F.1_g007030 Hydrangea macrophylla HOM05D005926 ORTHO05D007001 3.2e-66 257.3 473 40.8
Nn6g35019 Nelumbo nucifera HOM05D005926 ORTHO05D007001 4.1e-66 256.9 646 35.0
Sed0000046 Sechium edule HOM05D005926 ORTHO05D007001 2.7e-65 254.2 623 35.5
Nitab4.5_0001027g0040 Nicotiana tabacum HOM05D005926 ORTHO05D007001 1.3e-64 251.9 630 35.7
Migut.F00893 Erythranthe guttata HOM05D005926 ORTHO05D007001 3.9e-64 250.4 641 36.0
CAN.G1550.12 Capsicum annuum HOM05D005926 ORTHO05D007001 4.3e-63 246.9 607 35.6
CSS0037332 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 7.3e-63 246.1 743 31.6
DCAR_014349 Daucus carota HOM05D005926 ORTHO05D007001 7.3e-63 246.1 654 34.1
Nitab4.5_0003396g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 9.6e-63 245.7 535 37.6
Sopen05g033810 Solanum pennellii HOM05D005926 ORTHO05D007001 9.6e-63 245.7 689 33.5
Aqoxy2G01361 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 6.2e-62 243.0 695 33.5
arahy.Tifrunner.gnm1.ann1.L8M84U Arachis hypogaea HOM05D005926 ORTHO05D007001 8.1e-62 242.7 809 31.4
ECA232G4290 Erigeron canadensis HOM05D005926 ORTHO05D007001 1.1e-61 242.3 558 37.5
Nitab4.5_0002878g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 1.1e-61 242.3 659 34.4
CSS0015422 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 1.4e-61 241.9 726 32.2
arahy.Tifrunner.gnm1.ann1.UA3HQT Arachis hypogaea HOM05D005926 ORTHO05D007001 4.0e-61 240.4 811 31.3
Solyc05g055360.4 Solanum lycopersicum HOM05D005926 ORTHO05D007001 8.4e-59 232.6 640 34.8
Nitab4.5_0012334g0010 Nicotiana tabacum HOM05D005926 ORTHO05D007001 1.2e-57 228.8 656 33.8
Aqoxy4G02869 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 3.5e-57 227.3 684 33.6
HanXRQChr05g0147041 Helianthus annuus HOM05D005926 ORTHO05D007001 1.1e-55 222.2 506 36.8
EL10Ac4g08669 Beta vulgaris HOM05D005926 ORTHO05D007001 2.1e-54 218.0 675 33.0
SGA_v2.0_scaffold62G21348 Striga asiatica HOM05D005926 ORTHO05D007001 1.8e-53 214.9 538 36.4
Actinidia28534 Actinidia chinensis HOM05D005926 ORTHO05D007001 3.1e-53 214.2 643 31.9
Thhalv10010215m.g Eutrema salsugineum HOM05D005926 ORTHO05D007001 3.1e-53 214.2 554 34.3
AUR62041545 Chenopodium quinoa HOM05D005926 ORTHO05D007001 1.7e-51 208.4 656 32.0
THA.LOC104814724 Tarenaya hassleriana HOM05D005926 ORTHO05D007001 5.4e-50 203.4 547 35.1
PGSC0003DMG400027309 Solanum tuberosum HOM05D005926 ORTHO05D007001 7.1e-50 203.0 476 36.3
Sopen11g003350 Solanum pennellii HOM05D005926 ORTHO05D007001 1.6e-49 201.8 483 37.3
BraA09t39993Z Brassica rapa HOM05D005926 ORTHO05D007001 2.7e-49 201.1 541 32.7
Lsat_1_v5_gn_6_90261 Lactuca sativa HOM05D005926 ORTHO05D007001 3.5e-49 200.7 504 36.5
PSO384G0761 Papaver somniferum HOM05D005926 ORTHO05D007001 3.5e-49 200.7 530 36.4
C08p27480 Brassica napus HOM05D005926 ORTHO05D007001 1.3e-48 198.7 536 32.8
BolC8t50365H Brassica oleracea HOM05D005926 ORTHO05D007001 1.3e-48 198.7 536 32.8
Ah.04g163700 Amaranthus hybridus HOM05D005926 ORTHO05D007001 2.3e-48 198.0 700 31.9
A09p45300 Brassica napus HOM05D005926 ORTHO05D007001 3.0e-48 197.6 659 31.1
Solyc11g007510.2 Solanum lycopersicum HOM05D005926 ORTHO05D007001 5.1e-48 196.8 482 37.1
AL5G32830 Arabidopsis lyrata HOM05D005926 ORTHO05D007001 8.7e-48 196.1 545 32.1
CARHR161990 Cardamine hirsuta HOM05D005926 ORTHO05D007001 8.7e-48 196.1 707 30.8
PSO339G4155 Papaver somniferum HOM05D005926 ORTHO05D007001 1.5e-47 195.3 534 36.1
AT3G52240 Arabidopsis thaliana HOM05D005926 ORTHO05D007001 1.9e-47 194.9 631 31.7
Carub.0005s1860 Capsella rubella HOM05D005926 ORTHO05D007001 1.1e-45 189.1 637 31.1
BcaB02g08582 Brassica carinata HOM05D005926 ORTHO05D007001 3.1e-45 187.6 561 33.7
BcaC07g39594 Brassica carinata HOM05D005926 ORTHO05D007001 6.4e-43 179.9 521 31.9
Sp5g10020 Schrenkiella parvula HOM05D005926 ORTHO05D007001 1.4e-42 178.7 559 31.1
A04p07120 Brassica napus HOM05D005926 ORTHO05D007001 7.1e-42 176.4 539 31.9
BraA04t16409Z Brassica rapa HOM05D005926 ORTHO05D007001 3.5e-41 174.1 540 32.0
C04p40700 Brassica napus HOM05D005926 ORTHO05D007001 1.3e-40 172.2 540 31.7
BcaC02g09269 Brassica carinata HOM05D005926 ORTHO05D007001 3.9e-40 170.6 540 31.3
Aa31LG10G7340 Aethionema arabicum HOM05D005926 ORTHO05D007001 2.5e-39 167.9 550 32.2
Dinv20819 Davidia involucrata HOM05D005926 ORTHO05D007001 7.4e-39 166.4 327 37.3
BolC4t25653H Brassica oleracea HOM05D005926 ORTHO05D007001 9.6e-39 166.0 690 29.3
CDE04G2986 Ceratophyllum demersum HOM05D005926 ORTHO05D007001 3.1e-37 161.0 519 32.8
PSO443G0029 Papaver somniferum HOM05D005926 ORTHO05D007001 5.1e-32 143.7 345 40.0
Os05g0445800 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 1.3e-30 139.0 355 35.8
Haze_02594 Corylus avellana HOM05D005926 ORTHO05D007001 1.1e-29 136.0 391 31.5
Os05g0446500 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 1.7e-27 128.6 351 35.0
ATR0820G003 Amborella trichopoda HOM05D005926 ORTHO05D007001 6.5e-27 126.7 565 27.8
Zm00001eb147390 Zea mays HOM05D005926 ORTHO05D007001 2.5e-26 124.8 292 38.4
unitig_0.g760 Utricularia gibba HOM05D005926 ORTHO05D007001 1.6e-25 122.1 618 28.0
HPP92_002057 Vanilla planifolia HOM05D005926 ORTHO05D007001 2.1e-25 121.7 192 45.3
Zm00001eb289020 Zea mays HOM05D005926 ORTHO05D007001 6.1e-25 120.2 312 36.2
GSVIVG01031385001 Vitis vinifera HOM05D005926 ORTHO05D007001 2.5e-23 114.8 656 28.7
SEGI_23583 Sequoiadendron giganteum HOM05D005926 ORTHO05D007001 1.9e-18 98.6 379 30.9
Os04g0646050 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 2.3e-16 91.7 171 42.1
Oeu026567.1 Olea europaea HOM05D005926 ORTHO05D007001 1.1e-10 72.8 406 26.4
AagrBONN_evm.TU.Sc2ySwM_228.4811 Anthoceros agrestis HOM05D005926 ORTHO05D007001 2.7e-09 68.2 389 27.5
CSS0008181 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 2.2e-06 58.5 95 45.3
CSS0000366 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 2.8e-06 58.2 95 46.3


User provided reference genes

Program Settings