Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G134500 Phaseolus vulgaris HOM05D007436 ORTHO05D009398 2.2e-126 455.7 233 100.0
VMungo0540G0488 Vigna mungo HOM05D007436 ORTHO05D009398 3.8e-123 444.9 233 96.6
Glyma.09G017600 Glycine max HOM05D007436 ORTHO05D009398 9.8e-111 403.7 233 88.8
Glyma.15G123400 Glycine max HOM05D007436 ORTHO05D009398 2.7e-108 395.6 226 89.8
Lj6g0025098 Lotus japonicus HOM05D007436 ORTHO05D009398 1.2e-103 380.2 233 82.0
Ca_24687_v3 Cicer arietinum L. HOM05D007436 ORTHO05D009398 1.3e-99 366.7 233 81.1
TPR.G10477 Trifolium pratense HOM05D007436 ORTHO05D009398 1.7e-99 366.3 227 83.3
Psat1g171240 Pisum sativum HOM05D007436 ORTHO05D009398 2.3e-99 365.9 234 79.9
Medtr2g028000 Medicago truncatula HOM05D007436 ORTHO05D009398 6.2e-97 357.8 229 80.8
Lalb_Chr15g0088471 Lupinus albus HOM05D007436 ORTHO05D009398 1.1e-88 330.5 233 73.8
TAR627G0530 Trochodendron aralioides HOM05D007436 ORTHO05D009398 4.3e-82 308.5 234 67.1
Dinv04377 Davidia involucrata HOM05D007436 ORTHO05D009398 2.8e-81 305.8 217 72.4
MSTRG.14579 Avicennia marina HOM05D007436 ORTHO05D009398 1.1e-80 303.9 184 79.3
Hma1.2p1_0394F.1_g143390 Hydrangea macrophylla HOM05D007436 ORTHO05D009398 1.1e-80 303.9 204 74.0
MBI14_g12730_MAGBIO Magnolia biondii HOM05D007436 ORTHO05D009398 3.1e-80 302.4 206 72.3
Haze_07065 Corylus avellana HOM05D007436 ORTHO05D009398 1.5e-79 300.1 215 72.6
Prupe.4G000400 Prunus persica HOM05D007436 ORTHO05D009398 2.0e-79 299.7 208 72.1
Rhsim13G0138000 Rhododendron simsii HOM05D007436 ORTHO05D009398 2.0e-79 299.7 215 71.2
Actinidia01458 Actinidia chinensis HOM05D007436 ORTHO05D009398 7.6e-79 297.7 223 69.1
PGR004G2900 Punica granatum HOM05D007436 ORTHO05D009398 7.6e-79 297.7 226 67.3
COL.COLO4_31969 Corchorus olitorius HOM05D007436 ORTHO05D009398 2.2e-78 296.2 202 72.3
QL05p066185 Quercus lobata HOM05D007436 ORTHO05D009398 2.2e-78 296.2 219 70.3
Ciclev10016151m.g Citrus clementina HOM05D007436 ORTHO05D009398 4.9e-78 295.0 208 71.6
Potri.006G000600 Populus trichocarpa HOM05D007436 ORTHO05D009398 6.4e-78 294.7 175 81.1
Thecc.06G244700 Theobroma cacao HOM05D007436 ORTHO05D009398 6.4e-78 294.7 202 72.3
Potri.016G000900 Populus trichocarpa HOM05D007436 ORTHO05D009398 8.4e-78 294.3 199 73.4
Nitab4.5_0000147g0110 Nicotiana tabacum HOM05D007436 ORTHO05D009398 1.4e-77 293.5 216 69.0
Aqoxy5G00546 Aquilegia oxysepala HOM05D007436 ORTHO05D009398 2.4e-77 292.7 171 81.9
FvH4_3g00011 Fragaria vesca HOM05D007436 ORTHO05D009398 2.4e-77 292.7 204 71.6
TWI38G0239 Tripterygium wilfordii HOM05D007436 ORTHO05D009398 5.4e-77 291.6 179 78.8
Nitab4.5_0001663g0200 Nicotiana tabacum HOM05D007436 ORTHO05D009398 7.1e-77 291.2 214 69.2
Gohir.D05G180600 Gossypium hirsutum HOM05D007436 ORTHO05D009398 9.2e-77 290.8 199 71.4
Gorai.009G185600 Gossypium raimondii HOM05D007436 ORTHO05D009398 9.2e-77 290.8 199 71.4
Migut.H01642 Erythranthe guttata HOM05D007436 ORTHO05D009398 1.6e-76 290.0 205 68.3
CsaV3_6G047980 Cucumis sativus L. HOM05D007436 ORTHO05D009398 2.1e-76 289.7 208 68.3
MD10G1342400 Malus domestica HOM05D007436 ORTHO05D009398 2.7e-76 289.3 174 79.3
ClCG01G021000 Citrullus lanatus HOM05D007436 ORTHO05D009398 3.5e-76 288.9 233 63.9
arahy.Tifrunner.gnm1.ann1.61UQ0U Arachis hypogaea HOM05D007436 ORTHO05D009398 1.0e-75 287.3 230 71.7
RcHm_v2.0_Chr5g0000011 Rosa chinensis HOM05D007436 ORTHO05D009398 1.0e-75 287.3 204 71.1
FAN21G3717 Fragaria x ananassa HOM05D007436 ORTHO05D009398 1.7e-75 286.6 195 72.8
PGSC0003DMG400027262 Solanum tuberosum HOM05D007436 ORTHO05D009398 6.6e-75 284.6 216 67.6
Sed0017957 Sechium edule HOM05D007436 ORTHO05D009398 8.6e-75 284.3 204 69.6
ECA247G4131 Erigeron canadensis HOM05D007436 ORTHO05D009398 1.5e-74 283.5 172 76.7
Lsat_1_v5_gn_7_12720 Lactuca sativa HOM05D007436 ORTHO05D009398 1.5e-74 283.5 187 72.7
Solyc04g015330.3 Solanum lycopersicum HOM05D007436 ORTHO05D009398 1.5e-74 283.5 216 67.6
CAN.G1905.6 Capsicum annuum HOM05D007436 ORTHO05D009398 2.5e-74 282.7 212 65.6
Cc09_g00050 Coffea canephora HOM05D007436 ORTHO05D009398 5.6e-74 281.6 177 76.8
Sopen04g007390 Solanum pennellii HOM05D007436 ORTHO05D009398 5.6e-74 281.6 216 66.7
DCAR_015316 Daucus carota HOM05D007436 ORTHO05D009398 7.3e-74 281.2 229 63.3
HanXRQChr05g0129051 Helianthus annuus HOM05D007436 ORTHO05D009398 9.6e-74 280.8 171 76.0
HPP92_000124 Vanilla planifolia HOM05D007436 ORTHO05D009398 2.8e-73 279.3 221 65.6
Cpa.g.sc27.183 Carica papaya HOM05D007436 ORTHO05D009398 3.6e-73 278.9 277 56.0
vmacro03584 Vaccinium macrocarpon HOM05D007436 ORTHO05D009398 3.6e-73 278.9 249 61.0
EL10Ac6g14103 Beta vulgaris HOM05D007436 ORTHO05D009398 1.4e-72 276.9 179 72.1
ATR0751G013 Amborella trichopoda HOM05D007436 ORTHO05D009398 5.2e-72 275.0 202 66.8
Ah.02g128250 Amaranthus hybridus HOM05D007436 ORTHO05D009398 5.8e-71 271.6 177 71.8
CDE03G0161 Ceratophyllum demersum HOM05D007436 ORTHO05D009398 5.8e-71 271.6 192 67.2
Sc24g0002050 Simmondsia chinensis HOM05D007436 ORTHO05D009398 5.8e-71 271.6 177 72.9
GSVIVG01002756001 Vitis vinifera HOM05D007436 ORTHO05D009398 1.7e-70 270.0 221 65.6
AUR62028431 Chenopodium quinoa HOM05D007436 ORTHO05D009398 2.2e-70 269.6 219 61.6
CDE06G2435 Ceratophyllum demersum HOM05D007436 ORTHO05D009398 1.4e-69 266.9 230 59.1
Oeu016929.1 Olea europaea HOM05D007436 ORTHO05D009398 1.4e-69 266.9 187 71.7
Sabra06G0000900 Salix brachista HOM05D002163 ORTHO05D002386 1.9e-69 266.5 159 81.1
AUR62002774 Chenopodium quinoa HOM05D007436 ORTHO05D009398 3.2e-69 265.8 177 70.6
Nn3g16606 Nelumbo nucifera HOM05D007436 ORTHO05D009398 7.1e-69 264.6 154 81.2
Os09g0287300 Oryza sativa ssp. japonica HOM05D007436 ORTHO05D009398 1.3e-67 260.4 233 59.2
THA.LOC104813862 Tarenaya hassleriana HOM05D007436 ORTHO05D009398 1.3e-67 260.4 226 58.4
AL5G32730 Arabidopsis lyrata HOM05D007436 ORTHO05D009398 1.7e-67 260.0 225 60.0
AT3G52155 Arabidopsis thaliana HOM05D007436 ORTHO05D009398 1.7e-67 260.0 179 69.8
Aa31LG10G7250 Aethionema arabicum HOM05D007436 ORTHO05D009398 3.9e-67 258.8 171 73.1
Sp5g10120 Schrenkiella parvula HOM05D007436 ORTHO05D009398 3.9e-67 258.8 179 69.8
Carub.0005s1851 Capsella rubella HOM05D007436 ORTHO05D009398 6.6e-67 258.1 179 69.3
Zm00001eb309010 Zea mays HOM05D007436 ORTHO05D009398 6.6e-67 258.1 172 74.4
BcaC06g33383 Brassica carinata HOM05D007436 ORTHO05D009398 2.5e-66 256.1 179 70.4
C07p46820 Brassica napus HOM05D007436 ORTHO05D009398 2.5e-66 256.1 179 70.4
BolC7t45199H Brassica oleracea HOM05D007436 ORTHO05D009398 2.5e-66 256.1 179 70.4
Peaxi162Scf00563g00525 Petunia axillaris HOM05D007436 ORTHO05D009398 2.5e-66 256.1 153 78.4
Thhalv10010705m.g Eutrema salsugineum HOM05D007436 ORTHO05D009398 3.3e-66 255.8 179 69.3
CARHR161900 Cardamine hirsuta HOM05D007436 ORTHO05D009398 4.3e-66 255.4 177 69.5
A03p48730 Brassica napus HOM05D007436 ORTHO05D009398 9.6e-66 254.2 179 69.8
BraA03t13973Z Brassica rapa HOM05D007436 ORTHO05D009398 9.6e-66 254.2 179 69.8
CiPaw.09G113200 Carya illinoinensis HOM05D007436 ORTHO05D009398 4.8e-65 251.9 195 66.7
Mapoly0056s0036 Marchantia polymorpha HOM05D007436 ORTHO05D009398 4.0e-64 248.8 173 66.5
Hund25779 Selenicereus undatus HOM05D007436 ORTHO05D009398 6.4e-62 241.5 207 59.4
Zm00001eb097480 Zea mays HOM05D007436 ORTHO05D009398 1.9e-61 240.0 152 78.3
Atru.chr1.2207 Acer truncatum HOM05D002163 ORTHO05D002386 1.8e-59 233.4 186 65.1
SMO358G0652 Selaginella moellendorffii HOM05D007436 ORTHO05D009398 5.1e-59 231.9 170 60.6
Pp3c4_8570 Physcomitrium patens HOM05D007436 ORTHO05D009398 1.9e-58 229.9 172 63.4
AagrBONN_evm.TU.Sc2ySwM_228.5510 Anthoceros agrestis HOM05D007436 ORTHO05D009398 2.0e-55 219.9 182 60.4
Sabra16G0007700 Salix brachista HOM05D002163 ORTHO05D002386 2.5e-50 203.0 199 58.8
Hma1.2p1_0394F.1_g143400 Hydrangea macrophylla HOM05D007436 ORTHO05D009398 3.7e-49 199.1 145 71.0
CBR_g31519 Chara braunii HOM05D007436 ORTHO05D009398 6.2e-49 198.4 181 55.8
Lj1A1250G60 Lonicera japonica HOM05D007436 ORTHO05D009398 3.2e-45 186.0 116 77.6
Manes.09G072800 Manihot esculenta HOM05D007436 ORTHO05D009398 4.2e-45 185.7 150 67.3
MELO3C007986.2 Cucumis melo HOM05D007436 ORTHO05D009398 7.9e-44 181.4 155 64.5
Gohir.A05G177200 Gossypium hirsutum HOM05D007436 ORTHO05D009398 1.9e-42 176.8 123 69.1
Eucgr.D00973 Eucalyptus grandis HOM05D007436 ORTHO05D009398 6.3e-41 171.8 224 45.1
SGA_v2.0_scaffold49G18215 Striga asiatica HOM05D007436 ORTHO05D009398 1.4e-40 170.6 224 42.9
SEGI_34845 Sequoiadendron giganteum HOM05D007436 ORTHO05D009398 1.5e-31 140.6 82 74.4
MCO14G290 Micromonas commoda HOM05D007436 ORTHO05D009398 1.3e-30 137.5 232 38.8
Cre10.g431850 Chlamydomonas reinhardtii HOM05D007436 ORTHO05D009398 2.9e-30 136.3 136 44.1
PRCOL_00004330 Prasinoderma coloniale HOM05D007436 ORTHO05D009398 8.0e-20 101.7 156 36.5
PRCOL_00006376 Prasinoderma coloniale HOM05D007436 ORTHO05D009398 1.1e-18 97.8 180 35.6
Lj1A1250G59 Lonicera japonica HOM05D007436 ORTHO05D009398 5.5e-13 79.0 39 87.2


User provided reference genes

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