Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G172700 Phaseolus vulgaris HOM05D004177 ORTHO05D004826 1.5e-217 759.2 369 100.0
VMungo0464G2175 Vigna mungo HOM05D004177 ORTHO05D004826 7.5e-214 746.9 367 98.9
Glyma.07G127600 Glycine max HOM05D004177 ORTHO05D004826 2.4e-204 715.3 369 94.3
Psat7g081120 Pisum sativum HOM05D004177 ORTHO05D004826 2.4e-196 688.7 369 89.2
TPR.G38463 Trifolium pratense HOM05D004177 ORTHO05D004826 9.5e-193 676.8 361 89.2
arahy.Tifrunner.gnm1.ann1.H1EJ8W Arachis hypogaea HOM05D004177 ORTHO05D004826 2.1e-192 675.6 361 89.2
arahy.Tifrunner.gnm1.ann1.TIR1N2 Arachis hypogaea HOM05D004177 ORTHO05D004826 2.1e-192 675.6 361 89.2
Ca_18171_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 2.8e-192 675.2 369 87.8
Lj1g0019759 Lotus japonicus HOM05D004177 ORTHO05D004826 2.0e-190 669.1 370 87.3
Lalb_Chr24g0393931 Lupinus albus HOM05D004177 ORTHO05D004826 2.2e-189 665.6 360 86.9
Cfa003130 Carpinus fangiana HOM05D004177 ORTHO05D004826 5.4e-188 661.0 361 86.4
THA.LOC104816571 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 3.5e-187 658.3 360 86.1
C09p70810 Brassica napus HOM05D004177 ORTHO05D004826 1.0e-186 656.8 364 86.3
QL02p063435 Quercus lobata HOM05D004177 ORTHO05D004826 1.0e-186 656.8 368 84.5
CiPaw.03G219400 Carya illinoinensis HOM05D004177 ORTHO05D004826 1.3e-186 656.4 357 86.6
BcaC06g32302 Brassica carinata HOM05D004177 ORTHO05D004826 2.3e-186 655.6 362 86.5
THA.LOC104826863 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 5.0e-186 654.4 359 86.1
Ciclev10008698m.g Citrus clementina HOM05D004177 ORTHO05D004826 6.6e-186 654.1 353 87.8
Sp6g36980 Schrenkiella parvula HOM05D004177 ORTHO05D004826 8.6e-186 653.7 364 85.2
Sabra03G0136900 Salix brachista HOM05D004177 ORTHO05D004826 2.5e-185 652.1 356 86.8
Potri.003G186900 Populus trichocarpa HOM05D004177 ORTHO05D004826 5.6e-185 651.0 356 86.8
PGR142G0935 Punica granatum HOM05D004177 ORTHO05D004826 1.6e-184 649.4 356 87.1
Hma1.2p1_0663F.1_g198701 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 2.1e-184 649.0 358 85.8
TWI09G1015 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 2.8e-184 648.7 358 85.5
AL6G15840 Arabidopsis lyrata HOM05D004177 ORTHO05D004826 4.7e-184 647.9 357 85.7
Actinidia25277 Actinidia chinensis HOM05D004177 ORTHO05D004826 1.1e-183 646.7 356 86.0
A10p30370 Brassica napus HOM05D004177 ORTHO05D004826 1.1e-183 646.7 361 85.3
Thhalv10013870m.g Eutrema salsugineum HOM05D004177 ORTHO05D004826 1.4e-183 646.4 357 85.7
TPR.G9556 Trifolium pratense HOM05D004177 ORTHO05D004826 1.4e-183 646.4 366 85.5
Dinv36734 Davidia involucrata HOM05D004177 ORTHO05D004826 2.3e-183 645.6 358 85.2
Duzib114G0142 Durio zibethinus HOM05D004177 ORTHO05D004826 2.3e-183 645.6 358 84.4
AT5G05920 Arabidopsis thaliana HOM05D004177 ORTHO05D004826 4.0e-183 644.8 358 84.6
Thecc.10G003500 Theobroma cacao HOM05D004177 ORTHO05D004826 6.8e-183 644.0 358 84.1
Actinidia29891 Actinidia chinensis HOM05D004177 ORTHO05D004826 1.2e-182 643.3 356 86.0
Hma1.2p1_1074F.1_g254310 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 2.0e-182 642.5 358 84.9
Manes.15G104600 Manihot esculenta HOM05D004177 ORTHO05D004826 2.6e-182 642.1 356 85.4
AUR62003036 Chenopodium quinoa HOM05D004177 ORTHO05D004826 3.4e-182 641.7 356 84.3
Sc14g0000820 Simmondsia chinensis HOM05D004177 ORTHO05D004826 3.4e-182 641.7 357 86.0
BolC9t59847H Brassica oleracea HOM05D004177 ORTHO05D004826 4.4e-182 641.3 379 81.8
AUR62007842 Chenopodium quinoa HOM05D004177 ORTHO05D004826 4.4e-182 641.3 356 84.0
MELO3C005126.2 Cucumis melo HOM05D004177 ORTHO05D004826 4.4e-182 641.3 356 84.3
GSVIVG01008468001 Vitis vinifera HOM05D004177 ORTHO05D004826 4.4e-182 641.3 357 86.0
Eucgr.C00926 Eucalyptus grandis HOM05D004177 ORTHO05D004826 5.8e-182 641.0 356 85.1
Gohir.D10G201600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.3e-181 639.8 358 83.8
Nn6g35409 Nelumbo nucifera HOM05D004177 ORTHO05D004826 1.7e-181 639.4 360 82.8
Prupe.7G214500 Prunus persica HOM05D004177 ORTHO05D004826 2.2e-181 639.0 356 84.0
Atru.chr7.1532 Acer truncatum HOM05D004177 ORTHO05D004826 2.9e-181 638.6 356 85.1
Aa31LG11G6950 Aethionema arabicum HOM05D004177 ORTHO05D004826 3.7e-181 638.3 358 84.4
Ca_14076_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 6.4e-181 637.5 365 84.9
Gorai.011G226300 Gossypium raimondii HOM05D004177 ORTHO05D004826 6.4e-181 637.5 358 83.2
TAR636G0014 Trochodendron aralioides HOM05D004177 ORTHO05D004826 6.4e-181 637.5 359 84.7
CiPaw.12G022300 Carya illinoinensis HOM05D004177 ORTHO05D004826 1.1e-180 636.7 358 85.5
BraA10t45083Z Brassica rapa HOM05D004177 ORTHO05D004826 1.4e-180 636.3 372 82.0
Ah.09g228420 Amaranthus hybridus HOM05D004177 ORTHO05D004826 4.1e-180 634.8 358 81.8
CsaV3_5G024780 Cucumis sativus L. HOM05D004177 ORTHO05D004826 4.1e-180 634.8 353 84.1
MD15G1202800 Malus domestica HOM05D004177 ORTHO05D004826 4.1e-180 634.8 354 84.2
HanXRQChr09g0263461 Helianthus annuus HOM05D004177 ORTHO05D004826 5.4e-180 634.4 357 84.0
MBI04_g06223_MAGBIO Magnolia biondii HOM05D004177 ORTHO05D004826 5.4e-180 634.4 373 80.4
Aqoxy2G03855 Aquilegia oxysepala HOM05D004177 ORTHO05D004826 7.0e-180 634.0 358 83.2
CANSAT11G0575 Cannabis sativa HOM05D004177 ORTHO05D004826 1.2e-179 633.3 357 82.6
Lsat_1_v5_gn_8_88081 Lactuca sativa HOM05D004177 ORTHO05D004826 1.2e-179 633.3 357 83.2
vmacro00113 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 1.6e-179 632.9 359 85.0
Gorai.011G226400 Gossypium raimondii HOM05D004177 ORTHO05D004826 2.1e-179 632.5 358 83.0
Sed0022999 Sechium edule HOM05D004177 ORTHO05D004826 2.1e-179 632.5 357 83.5
Gohir.D10G201700 Gossypium hirsutum HOM05D004177 ORTHO05D004826 3.5e-179 631.7 358 83.0
Carub.0006s0480 Capsella rubella HOM05D004177 ORTHO05D004826 4.6e-179 631.3 357 82.9
Migut.J00439 Erythranthe guttata HOM05D004177 ORTHO05D004826 4.6e-179 631.3 349 84.8
AUR62027470 Chenopodium quinoa HOM05D004177 ORTHO05D004826 7.8e-179 630.6 354 84.2
Rhsim03G0234600 Rhododendron simsii HOM05D004177 ORTHO05D004826 1.7e-178 629.4 356 85.4
ClCG01G007700 Citrullus lanatus HOM05D004177 ORTHO05D004826 2.3e-178 629.0 367 81.5
BolC2t06219H Brassica oleracea HOM05D004177 ORTHO05D004826 1.5e-177 626.3 360 82.5
Cc06_g10990 Coffea canephora HOM05D004177 ORTHO05D004826 1.9e-177 625.9 354 83.1
RcHm_v2.0_Chr2g0092611 Rosa chinensis HOM05D004177 ORTHO05D004826 1.9e-177 625.9 357 82.1
BcaB05g21688 Brassica carinata HOM05D004177 ORTHO05D004826 4.3e-177 624.8 357 82.4
ECA233G2252 Erigeron canadensis HOM05D004177 ORTHO05D004826 4.3e-177 624.8 362 81.5
MSTRG.19533 Avicennia marina HOM05D004177 ORTHO05D004826 1.6e-176 622.9 353 83.3
Gohir.A10G194600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 6.2e-176 620.9 358 82.1
SalBow6G4427 Salvia bowleyana HOM05D004177 ORTHO05D004826 8.1e-176 620.5 350 83.7
MD02G1073000 Malus domestica HOM05D004177 ORTHO05D004826 1.1e-175 620.2 353 82.2
Sopen02g025490 Solanum pennellii HOM05D004177 ORTHO05D004826 4.0e-175 618.2 367 79.6
SGA_v2.0_scaffold62G21577 Striga asiatica HOM05D004177 ORTHO05D004826 5.2e-175 617.8 354 81.4
FvH4_1g06830 Fragaria vesca HOM05D004177 ORTHO05D004826 6.8e-175 617.5 358 81.0
Solyc02g080800.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 6.8e-175 617.5 364 80.2
BraA02t04865Z Brassica rapa HOM05D004177 ORTHO05D004826 1.3e-173 613.2 367 80.4
HanXRQChr04g0112631 Helianthus annuus HOM05D004177 ORTHO05D004826 6.4e-173 610.9 355 80.8
Lsat_1_v5_gn_8_88021 Lactuca sativa HOM05D004177 ORTHO05D004826 3.2e-172 608.6 357 79.0
CAN.G1014.11 Capsicum annuum HOM05D004177 ORTHO05D004826 4.1e-172 608.2 367 79.3
PSO210G7296 Papaver somniferum HOM05D004177 ORTHO05D004826 4.1e-172 608.2 357 80.1
ECA236G1557 Erigeron canadensis HOM05D004177 ORTHO05D004826 1.2e-171 606.7 361 79.8
SHI02807 Sapria himalayana HOM05D004177 ORTHO05D004826 2.7e-171 605.5 378 75.4
PSO210G0074 Papaver somniferum HOM05D004177 ORTHO05D004826 6.0e-171 604.4 357 79.8
FAN28G1160 Fragaria x ananassa HOM05D004177 ORTHO05D004826 7.8e-171 604.0 370 78.4
CSS0022162 Camellia sinensis var. sinensis HOM05D004177 ORTHO05D004826 2.3e-170 602.4 377 77.5
Nitab4.5_0002695g0050 Nicotiana tabacum HOM05D004177 ORTHO05D004826 2.3e-170 602.4 370 78.4
Oeu052128.1 Olea europaea HOM05D004177 ORTHO05D004826 3.9e-170 601.7 341 82.7
Nitab4.5_0007963g0020 Nicotiana tabacum HOM05D004177 ORTHO05D004826 8.6e-170 600.5 378 76.5
ATR0789G091 Amborella trichopoda HOM05D004177 ORTHO05D004826 3.6e-168 595.1 359 79.9
DCAR_012005 Daucus carota HOM05D004177 ORTHO05D004826 8.1e-168 594.0 352 80.4
FAN26G2529 Fragaria x ananassa HOM05D004177 ORTHO05D004826 8.9e-167 590.5 369 77.0
Haze_25874 Corylus avellana HOM05D004177 ORTHO05D004826 5.8e-166 587.8 376 75.3
HPP92_011031 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.9e-164 582.8 357 77.9
EL10Ac6g14643 Beta vulgaris HOM05D004177 ORTHO05D004826 3.2e-164 582.0 358 77.9
Solyc02g080790.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 3.2e-164 582.0 362 76.0
Cpa.g.sc19.251 Carica papaya HOM05D004177 ORTHO05D004826 7.1e-164 580.9 358 79.6
Sopen02g025480 Solanum pennellii HOM05D004177 ORTHO05D004826 2.1e-163 579.3 362 75.7
unitig_27.g24734 Utricularia gibba HOM05D001806 ORTHO05D004826 4.6e-163 578.2 349 79.7
SEGI_08410 Sequoiadendron giganteum HOM05D004177 ORTHO05D004826 8.7e-162 573.9 356 75.8
PSO596G0001 Papaver somniferum HOM05D004177 ORTHO05D004826 2.5e-161 572.4 355 74.9
Os03g0740600 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 3.6e-160 568.5 359 75.8
COL.COLO4_19342 Corchorus olitorius HOM05D004177 ORTHO05D004826 3.1e-159 565.5 358 76.3
HPP92_001732 Vanilla planifolia HOM05D004177 ORTHO05D004826 9.9e-158 560.5 357 75.4
Gohir.A10G194500 Gossypium hirsutum HOM05D004177 ORTHO05D004826 2.2e-157 559.3 358 75.4
AUR62031232 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.9e-156 556.2 356 75.8
HPP92_014582 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.0e-154 550.4 347 74.4
Pp3c2_9490 Physcomitrium patens HOM05D004177 ORTHO05D004826 5.1e-154 548.1 357 71.1
Mapoly0001s0219 Marchantia polymorpha HOM05D004177 ORTHO05D004826 1.1e-153 547.0 349 72.8
Zm00001eb215220 Zea mays HOM05D004177 ORTHO05D004826 2.5e-153 545.8 359 74.7
FAN19G3030 Fragaria x ananassa HOM05D004177 ORTHO05D004826 5.6e-153 544.7 358 73.7
CARHR207300 Cardamine hirsuta HOM05D004177 ORTHO05D004826 1.6e-152 543.1 295 86.4
FAN23G1990 Fragaria x ananassa HOM05D004177 ORTHO05D004826 2.1e-152 542.7 358 72.9
Zm00001eb085620 Zea mays HOM05D004177 ORTHO05D004826 1.4e-151 540.0 374 70.3
SMO337G0022 Selaginella moellendorffii HOM05D004177 ORTHO05D004826 1.8e-151 539.7 353 71.1
vmacro06273 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 6.9e-151 537.7 431 64.5
AagrBONN_evm.TU.Sc2ySwM_344.1392 Anthoceros agrestis HOM05D004177 ORTHO05D004826 7.6e-150 534.3 358 70.4
FAN26G0736 Fragaria x ananassa HOM05D004177 ORTHO05D004826 2.7e-147 525.8 365 71.8
MELO3C025268.2 Cucumis melo HOM05D004177 ORTHO05D004826 3.0e-146 522.3 356 72.5
TWI12G1142 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 4.8e-144 515.0 279 87.1
AagrBONN_evm.TU.Sc2ySwM_344.3440 Anthoceros agrestis HOM05D004177 ORTHO05D004826 1.7e-141 506.5 385 63.6
HPP92_016636 Vanilla planifolia HOM05D004177 ORTHO05D004826 5.1e-138 495.0 291 80.1
CDE04G2922 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 5.3e-135 485.0 358 67.0
PRCOL_00001978 Prasinoderma coloniale HOM05D004177 ORTHO05D004826 1.1e-132 477.2 351 63.8
Dinv42291 Davidia involucrata HOM05D004177 ORTHO05D004826 3.2e-132 475.7 239 92.5
MCO16G096 Micromonas commoda HOM05D004177 ORTHO05D004826 1.8e-130 469.9 335 65.4
Peaxi162Scf00178g01719 Petunia axillaris HOM05D004177 ORTHO05D004826 4.5e-126 455.3 720 39.6
Cre08.g369800 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 2.2e-125 453.0 335 62.1
Cre01.g018950 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 1.6e-123 446.8 316 66.1
Sed0017389 Sechium edule HOM05D004177 ORTHO05D004826 2.6e-113 412.9 262 74.4
Haze_27186 Corylus avellana HOM05D004177 ORTHO05D004826 2.2e-109 399.8 348 54.9
Nn4g24829 Nelumbo nucifera HOM05D004177 ORTHO05D004826 4.7e-107 392.1 239 75.7
Os09g0421100 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 6.5e-101 371.7 339 57.8
AagrBONN_evm.TU.Sc2ySwM_362.473 Anthoceros agrestis HOM05D004177 ORTHO05D004826 3.7e-96 355.9 332 55.1
CBR_g31495 Chara braunii HOM05D004177 ORTHO05D004826 3.1e-95 352.8 258 64.3
SGA_v2.0_scaffold439G51649 Striga asiatica HOM05D004177 ORTHO05D004826 7.0e-95 351.7 216 76.4
SGA_v2.0_scaffold439G51638 Striga asiatica HOM05D004177 ORTHO05D004826 9.1e-87 324.7 202 76.2
Hund18418 Selenicereus undatus HOM05D004177 ORTHO05D004826 1.0e-85 321.2 291 59.8
HanXRQChr04g0126441 Helianthus annuus HOM05D004177 ORTHO05D004826 3.8e-48 196.4 100 94.0
CAN.G744.9 Capsicum annuum HOM05D004177 ORTHO05D004826 1.1e-47 194.9 142 68.3
Oeu062209.1 Olea europaea HOM05D004177 ORTHO05D004826 5.4e-47 192.6 125 76.8
Oeu062213.1 Olea europaea HOM05D004177 ORTHO05D004826 5.4e-47 192.6 125 76.8
HanXRQChr13g0409461 Helianthus annuus HOM05D004177 ORTHO05D004826 1.2e-46 191.4 117 82.9
Oeu062208.1 Olea europaea HOM05D004177 ORTHO05D004826 1.2e-46 191.4 125 76.0
Oeu062211.1 Olea europaea HOM05D004177 ORTHO05D004826 1.3e-43 181.4 124 72.6
Actinidia03786 Actinidia chinensis HOM05D004177 ORTHO05D004826 3.1e-42 176.8 97 88.7
AagrBONN_evm.TU.Sc2ySwM_117.1724 Anthoceros agrestis HOM05D004177 ORTHO05D004826 4.0e-42 176.4 198 49.0
Hund18419 Selenicereus undatus HOM05D004177 ORTHO05D004826 4.0e-42 176.4 113 74.3
HPP92_016662 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.6e-38 164.5 98 76.5
C02p02540 Brassica napus HOM05D001260 ORTHO05D002424 2.1e-38 164.1 130 63.1
Aa31sc206G30 Aethionema arabicum HOM05D005780 ORTHO05D004826 2.2e-32 144.1 123 60.2
HPP92_016663 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.3e-29 134.8 119 59.7
Oeu039826.4 Olea europaea HOM05D002851 ORTHO05D003084 2.6e-25 120.6 69 82.6
RcHm_v2.0_Chr6g0296851 Rosa chinensis HOM05D004177 ORTHO05D004826 4.9e-24 116.3 65 86.2
Actinidia39745 Actinidia chinensis HOM05D004177 ORTHO05D004826 1.9e-23 114.4 64 82.8
Oeu056107.1 Olea europaea HOM05D004177 ORTHO05D004826 1.9e-23 114.4 71 76.1
CDE02G3953 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 6.7e-21 105.9 66 69.7
AUR62030112 Chenopodium quinoa HOM05D004177 ORTHO05D004826 4.3e-20 103.2 61 80.3
Peaxi162Scf00287g00176 Petunia axillaris HOM05D004177 ORTHO05D004826 5.8e-17 92.8 84 57.1
Nn4g24830 Nelumbo nucifera HOM05D004177 ORTHO05D004826 4.2e-15 86.7 128 43.8
HanXRQChr13g0409471 Helianthus annuus HOM05D004177 ORTHO05D004826 5.1e-13 79.7 62 59.7
Pp3c1_32420 Physcomitrium patens HOM05D004177 ORTHO05D004826 8.7e-13 79.0 49 69.4
Medtr8g079080 Medicago truncatula HOM05D004177 ORTHO05D004826 1.7e-08 64.7 41 75.6
VMungo0647G1164 Vigna mungo HOM05D004177 ORTHO05D004826 1.9e-07 61.2 52 65.4


User provided reference genes

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