Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 9.2e-60 233.4 122 100.0
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 1.2e-56 223.0 121 95.9
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 3.4e-54 214.9 122 93.4
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 3.7e-53 211.5 122 91.8
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 1.3e-50 203.0 122 89.3
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 1.4e-44 183.0 122 78.7
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.8e-39 166.0 126 75.4
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 1.9e-36 156.0 119 71.4
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 3.3e-33 145.2 120 66.7
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 5.6e-33 144.4 117 69.2
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 5.2e-31 137.9 126 64.3
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 2.6e-30 135.6 120 65.8
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 9.9e-30 133.7 122 63.9
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 2.2e-29 132.5 123 65.9
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 2.2e-29 132.5 123 61.8
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 4.9e-29 131.3 122 61.5
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 6.4e-29 131.0 124 60.5
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 1.1e-28 130.2 125 62.4
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 1.1e-28 130.2 123 61.0
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 1.1e-28 130.2 118 61.9
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 1.4e-28 129.8 123 61.0
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 5.4e-28 127.9 123 59.3
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 5.4e-28 127.9 123 60.2
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 5.4e-28 127.9 109 60.6
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 1.2e-27 126.7 122 60.7
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 2.7e-27 125.6 122 59.0
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 2.7e-27 125.6 121 57.9
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 4.6e-27 124.8 74 83.8
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 6.0e-27 124.4 123 61.0
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 6.0e-27 124.4 116 61.2
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 6.0e-27 124.4 118 60.2
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 7.8e-27 124.0 122 58.2
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 7.8e-27 124.0 122 58.2
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 1.0e-26 123.6 117 59.8
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 1.7e-26 122.9 124 58.9
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 2.3e-26 122.5 125 60.0
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 2.3e-26 122.5 126 57.9
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 3.0e-26 122.1 122 58.2
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 3.0e-26 122.1 125 57.6
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 5.1e-26 121.3 122 58.2
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 5.1e-26 121.3 118 60.2
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 6.6e-26 120.9 118 60.2
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 8.7e-26 120.6 118 60.2
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 1.1e-25 120.2 107 61.7
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 1.5e-25 119.8 120 58.3
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 1.9e-25 119.4 118 60.2
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 2.5e-25 119.0 123 56.1
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 2.5e-25 119.0 123 57.7
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 3.3e-25 118.6 120 57.5
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 4.3e-25 118.2 122 59.0
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 4.3e-25 118.2 121 56.2
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 5.6e-25 117.9 117 60.7
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 7.3e-25 117.5 123 56.9
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 9.6e-25 117.1 118 58.5
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 4.8e-24 114.8 119 59.7
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 6.2e-24 114.4 116 56.9
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 8.1e-24 114.0 122 56.6
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 1.1e-23 113.6 102 57.8
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 1.4e-23 113.2 124 55.6
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 1.4e-23 113.2 121 58.7
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 1.4e-23 113.2 120 58.3
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 1.8e-23 112.8 127 55.1
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 1.8e-23 112.8 120 54.2
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 1.8e-23 112.8 118 56.8
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 1.8e-23 112.8 110 56.4
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 3.1e-23 112.1 116 56.9
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 4.0e-23 111.7 119 58.0
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 4.0e-23 111.7 124 54.8
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 4.0e-23 111.7 120 57.5
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 6.9e-23 110.9 105 55.2
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 2.6e-22 109.0 123 56.1
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 3.4e-22 108.6 118 55.1
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 4.4e-22 108.2 123 55.3
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 9.9e-22 107.1 123 52.8
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 9.9e-22 107.1 121 52.1
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 9.9e-22 107.1 118 55.1
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 2.9e-21 105.5 118 57.6
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 6.4e-21 104.4 122 51.6
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 8.4e-21 104.0 104 61.5
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 1.1e-20 103.6 117 53.0
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 1.9e-20 102.8 68 70.6
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 1.9e-20 102.8 117 53.8
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 7.1e-20 100.9 118 53.4
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 2.7e-19 99.0 109 56.9
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 3.5e-19 98.6 124 50.0
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 4.6e-19 98.2 113 49.6
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 4.6e-19 98.2 61 70.5
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 6.0e-19 97.8 75 57.3
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 1.3e-18 96.7 108 58.3
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 1.3e-18 96.7 113 52.2
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 1.7e-18 96.3 92 58.7
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 2.3e-18 95.9 118 42.4
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 5.1e-18 94.7 143 45.5
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 6.6e-18 94.4 113 51.3
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 8.7e-18 94.0 82 59.8
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 2.5e-17 92.4 107 57.0
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 3.3e-17 92.0 122 50.8
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 5.6e-17 91.3 76 67.1
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 1.6e-16 89.7 124 50.0
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 1.6e-16 89.7 91 56.0
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 3.6e-16 88.6 122 49.2
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 6.2e-16 87.8 67 65.7
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 6.2e-16 87.8 67 65.7
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 2.4e-15 85.9 100 49.0
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 4.0e-15 85.1 108 52.8
VMungo0331G1181 Vigna mungo HOM05D007113 ORTHO05D008859 6.9e-15 84.3 107 55.1
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.2e-14 83.6 76 61.8
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 1.7e-13 79.7 104 51.9
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 8.4e-13 77.4 100 53.0
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 5.4e-12 74.7 121 41.3
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 4.6e-11 71.6 98 45.9
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 1.8e-10 69.7 67 52.2
Sabra16G0109100 Salix brachista HOM05D007113 ORTHO05D008859 3.3e-09 65.5 117 47.9
Prupe.6G274500 Prunus persica HOM05D007113 ORTHO05D008859 2.6e-06 55.8 86 45.3
Cpa.g.sc150.16 Carica papaya HOM05D007135 ORTHO05D008880 7.6e-06 54.3 52 61.5


User provided reference genes

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