Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G083300 Phaseolus vulgaris HOM05D008402 ORTHO05D000988 2.8e-79 298.5 145 100.0
Psat4g199160 Pisum sativum HOM05D008402 ORTHO05D000988 4.9e-36 154.8 129 55.0
Psat4g199200 Pisum sativum HOM05D008402 ORTHO05D000988 7.1e-35 151.0 129 53.5
Glyma.05G076900 Glycine max HOM05D008402 ORTHO05D000988 1.2e-34 150.2 131 57.3
Psat5g145680 Pisum sativum HOM05D008402 ORTHO05D000988 2.1e-34 149.4 132 51.5
Glyma.19G071100 Glycine max HOM05D008402 ORTHO05D000988 8.7e-33 144.1 114 59.6
Medtr8g031540 Medicago truncatula HOM05D008402 ORTHO05D000988 1.9e-32 142.9 130 55.4
Glyma.19G071200 Glycine max HOM05D008402 ORTHO05D000988 3.3e-32 142.1 131 54.2
Lj1g0006941 Lotus japonicus HOM05D008402 ORTHO05D000988 3.3e-32 142.1 130 53.8
Lj1g0024978 Lotus japonicus HOM05D008402 ORTHO05D000988 3.3e-32 142.1 130 53.8
Lj1g0017901 Lotus japonicus HOM05D008402 ORTHO05D000988 4.3e-32 141.7 130 53.1
Lj1g0004343 Lotus japonicus HOM05D008402 ORTHO05D000988 5.6e-32 141.4 128 53.9
Lj1g0018072 Lotus japonicus HOM05D008402 ORTHO05D000988 9.6e-32 140.6 130 53.1
Lj1g0025701 Lotus japonicus HOM05D008402 ORTHO05D000988 1.6e-31 139.8 130 53.1
Lj1g0020043 Lotus japonicus HOM05D008402 ORTHO05D000988 2.8e-31 139.0 130 52.3
Lj1g0003999 Lotus japonicus HOM05D008402 ORTHO05D000988 6.2e-31 137.9 130 52.3
Lj1g0020175 Lotus japonicus HOM05D008402 ORTHO05D000988 2.4e-30 136.0 130 52.3
TPR.G39632 Trifolium pratense HOM05D008402 ORTHO05D000988 6.4e-28 127.9 144 45.8
Lj1g0020102 Lotus japonicus HOM05D008402 ORTHO05D000988 8.4e-28 127.5 131 50.4
TPR.G4392 Trifolium pratense HOM05D008402 ORTHO05D000988 1.4e-27 126.7 135 48.9
TPR.G17585 Trifolium pratense HOM05D008402 ORTHO05D000988 7.1e-27 124.4 131 51.1
Phvul.001G071700 Phaseolus vulgaris HOM05D008402 ORTHO05D000988 2.1e-26 122.9 129 45.0
TPR.G29356 Trifolium pratense HOM05D008402 ORTHO05D000988 1.3e-25 120.2 132 43.9
Medtr1g054825 Medicago truncatula HOM05D008402 ORTHO05D000988 1.5e-24 116.7 131 42.7
Glyma.19G054100 Glycine max HOM05D008402 ORTHO05D000988 3.3e-24 115.5 129 45.7
Medtr8g011880 Medicago truncatula HOM05D008402 ORTHO05D000988 2.8e-23 112.5 111 45.9
Medtr1g054815 Medicago truncatula HOM05D008402 ORTHO05D000988 1.4e-22 110.2 131 40.5
VMungo0647G1641 Vigna mungo HOM05D008402 ORTHO05D000988 1.8e-22 109.8 140 40.0
Glyma.13G031400 Glycine max HOM05D008402 ORTHO05D000988 9.0e-22 107.5 129 41.9
TPR.G4413 Trifolium pratense HOM05D005745 ORTHO05D006857 1.2e-21 107.1 84 56.0
Medtr8g011740 Medicago truncatula HOM05D008402 ORTHO05D000988 5.8e-21 104.8 131 39.7
Phvul.001G071800 Phaseolus vulgaris HOM05D008402 ORTHO05D000988 1.3e-20 103.6 132 42.4
Lalb_Chr01g0019651 Lupinus albus HOM05D008402 ORTHO05D000988 4.9e-20 101.7 131 40.5
Glyma.14G153100 Glycine max HOM05D008402 ORTHO05D000988 8.4e-20 100.9 130 41.5
Medtr8g011770 Medicago truncatula HOM05D008402 ORTHO05D000988 1.9e-19 99.8 140 40.0
Lalb_Chr08g0236561 Lupinus albus HOM05D008402 ORTHO05D000988 7.1e-19 97.8 129 38.8
Glyma.18G066800 Glycine max HOM05D008402 ORTHO05D000988 5.1e-17 91.7 96 40.6
TPR.G20479 Trifolium pratense HOM05D008402 ORTHO05D000988 5.1e-17 91.7 137 38.7
Medtr8g011760 Medicago truncatula HOM05D008402 ORTHO05D000988 6.7e-17 91.3 131 36.6
VMungo0647G2588 Vigna mungo HOM05D008402 ORTHO05D000988 1.5e-16 90.1 131 35.9
Lalb_Chr14g0374851 Lupinus albus HOM05D008402 ORTHO05D000988 1.9e-16 89.7 133 42.1
VMungo0647G0396 Vigna mungo HOM05D008402 ORTHO05D000988 9.7e-16 87.4 136 36.8
Phvul.001G065900 Phaseolus vulgaris HOM05D008402 ORTHO05D000988 3.1e-14 82.4 79 44.3
Medtr8g031570 Medicago truncatula HOM05D008402 ORTHO05D000988 3.4e-13 79.0 129 38.8
Lalb_Chr17g0345791 Lupinus albus HOM05D008402 ORTHO05D000988 1.3e-12 77.0 87 46.0
Lalb_Chr17g0345781 Lupinus albus HOM05D008402 ORTHO05D000988 1.4e-11 73.6 132 35.6
Lj1g0018215 Lotus japonicus HOM05D008402 ORTHO05D000988 9.4e-11 70.9 98 36.7
CARHR250760 Cardamine hirsuta HOM05D001614 ORTHO05D000988 7.9e-10 67.8 79 36.7
CARHR289690 Cardamine hirsuta HOM05D001614 ORTHO05D000988 1.4e-09 67.0 77 41.6
Carub.0002s0922 Capsella rubella HOM05D001614 ORTHO05D000988 3.9e-09 65.5 80 37.5
Carub.0002s0923 Capsella rubella HOM05D001614 ORTHO05D000988 3.9e-09 65.5 80 37.5
Carub.0002s0927 Capsella rubella HOM05D001614 ORTHO05D000988 3.9e-09 65.5 80 37.5
Carub.0002s0928 Capsella rubella HOM05D001614 ORTHO05D000988 3.9e-09 65.5 80 37.5
Carub.0002s0930 Capsella rubella HOM05D001614 ORTHO05D000988 3.9e-09 65.5 80 37.5
Carub.0046s0004 Capsella rubella HOM05D001614 ORTHO05D000988 3.9e-09 65.5 80 37.5
Carub.0046s0006 Capsella rubella HOM05D001614 ORTHO05D000988 3.9e-09 65.5 80 37.5
Carub.0002s0925 Capsella rubella HOM05D001614 ORTHO05D000988 8.8e-09 64.3 80 37.5
Carub.0046s0002 Capsella rubella HOM05D001614 ORTHO05D000988 8.8e-09 64.3 80 37.5
Gohir.D01G184200 Gossypium hirsutum HOM05D008402 ORTHO05D000988 8.8e-09 64.3 129 28.7
Gorai.002G227700 Gossypium raimondii HOM05D008402 ORTHO05D000988 8.8e-09 64.3 129 28.7
CARHR201430 Cardamine hirsuta HOM05D001614 ORTHO05D000988 1.1e-08 63.9 75 37.3
Carub.0046s0001 Capsella rubella HOM05D001614 ORTHO05D000988 2.0e-08 63.2 80 36.2
Gohir.A01G193900 Gossypium hirsutum HOM05D008402 ORTHO05D000988 2.0e-08 63.2 131 28.2
AT1G57775 Arabidopsis thaliana HOM05D001614 ORTHO05D000988 2.5e-08 62.8 77 36.4
QL05p012573 Quercus lobata HOM05D008402 ORTHO05D000988 2.5e-08 62.8 130 26.9
Duzib106G0865 Durio zibethinus HOM05D018278 ORTHO05D000988 3.3e-08 62.4 148 27.7
AL8G17830 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 4.3e-08 62.0 80 36.2
AL8G17840 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 4.3e-08 62.0 80 36.2
AT1G45221 Arabidopsis thaliana HOM05D001614 ORTHO05D000988 4.3e-08 62.0 77 36.4
CARHR250750 Cardamine hirsuta HOM05D001614 ORTHO05D000988 5.7e-08 61.6 71 39.4
THA.LOC104817068 Tarenaya hassleriana HOM05D001614 ORTHO05D000988 5.7e-08 61.6 78 37.2
AT1G45215 Arabidopsis thaliana HOM05D001614 ORTHO05D000988 7.4e-08 61.2 77 36.4
AL8G17820 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 9.7e-08 60.8 80 35.0
Aa31sc424G10 Aethionema arabicum HOM05D001614 ORTHO05D000988 1.3e-07 60.5 77 39.0
AL8G17860 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 2.2e-07 59.7 80 33.8
AL8G17870 Arabidopsis lyrata HOM05D001614 ORTHO05D000988 2.2e-07 59.7 80 33.8
THA.LOC104816777 Tarenaya hassleriana HOM05D001614 ORTHO05D000988 3.7e-07 58.9 78 35.9
A07p33170 Brassica napus HOM05D001614 ORTHO05D000988 8.2e-07 57.8 78 35.9
C09p37000 Brassica napus HOM05D001614 ORTHO05D000988 8.2e-07 57.8 75 34.7
BolC9t56530H Brassica oleracea HOM05D001614 ORTHO05D000988 8.2e-07 57.8 75 34.7
BraA07t30945Z Brassica rapa HOM05D001614 ORTHO05D000988 8.2e-07 57.8 78 35.9
Carub.0008s0580 Capsella rubella HOM05D001614 ORTHO05D000988 8.2e-07 57.8 75 37.3
TPR.G36159 Trifolium pratense HOM05D010700 ORTHO05D012225 8.2e-07 57.8 81 35.8
CARHR054420 Cardamine hirsuta HOM05D001614 ORTHO05D000988 1.4e-06 57.0 77 37.7
BolC6t39042H Brassica oleracea HOM05D001614 ORTHO05D000988 1.8e-06 56.6 78 34.6
BcaC08g46074 Brassica carinata HOM05D001614 ORTHO05D000988 2.4e-06 56.2 78 34.6
A07p33160 Brassica napus HOM05D001614 ORTHO05D000988 2.4e-06 56.2 78 35.9
C01p52980 Brassica napus HOM05D007888 ORTHO05D009976 3.1e-06 55.8 110 30.9
C06p39450 Brassica napus HOM05D001614 ORTHO05D000988 3.1e-06 55.8 78 34.6
C06p39460 Brassica napus HOM05D001614 ORTHO05D000988 3.1e-06 55.8 78 34.6
C06p39470 Brassica napus HOM05D001614 ORTHO05D000988 3.1e-06 55.8 78 34.6
C06p39480 Brassica napus HOM05D001614 ORTHO05D000988 3.1e-06 55.8 78 34.6
C06p39490 Brassica napus HOM05D001614 ORTHO05D000988 3.1e-06 55.8 78 34.6
C06p39500 Brassica napus HOM05D001614 ORTHO05D000988 3.1e-06 55.8 78 34.6
C06p39510 Brassica napus HOM05D001614 ORTHO05D000988 3.1e-06 55.8 78 34.6
C06p39520 Brassica napus HOM05D001614 ORTHO05D000988 3.1e-06 55.8 78 34.6
BolC1t05238H Brassica oleracea HOM05D007888 ORTHO05D009976 3.1e-06 55.8 110 30.9
BolC6t39044H Brassica oleracea HOM05D001614 ORTHO05D000988 3.1e-06 55.8 78 34.6
BolC6t39045H Brassica oleracea HOM05D001614 ORTHO05D000988 3.1e-06 55.8 78 34.6
A07p33180 Brassica napus HOM05D001614 ORTHO05D000988 4.1e-06 55.5 78 34.6
A07p33190 Brassica napus HOM05D001614 ORTHO05D000988 4.1e-06 55.5 78 34.6
BraA07t30946Z Brassica rapa HOM05D001614 ORTHO05D000988 4.1e-06 55.5 78 34.6
BraA07t30948Z Brassica rapa HOM05D001614 ORTHO05D000988 4.1e-06 55.5 78 34.6
BraA07t30949Z Brassica rapa HOM05D001614 ORTHO05D000988 4.1e-06 55.5 78 34.6
Thhalv10022160m.g Eutrema salsugineum HOM05D007923 ORTHO05D009651 5.3e-06 55.1 79 31.6


User provided reference genes

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