Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 1.2e-118 429.9 211 100.0
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 2.8e-104 382.1 199 93.5
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 1.3e-98 363.2 198 91.9
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 1.7e-98 362.8 200 89.0
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 3.9e-98 361.7 192 89.1
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 1.1e-97 360.1 205 84.9
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 7.3e-97 357.5 192 89.6
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 9.5e-97 357.1 202 85.1
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 1.2e-94 350.1 199 84.4
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 2.0e-94 349.4 199 83.4
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 1.5e-89 333.2 199 78.9
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 3.3e-89 332.0 199 77.9
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 3.3e-89 332.0 199 77.9
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 3.3e-89 332.0 191 82.2
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 7.3e-89 330.9 196 77.0
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 1.2e-88 330.1 196 78.6
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 1.6e-88 329.7 198 76.3
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 3.6e-88 328.6 199 78.9
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 3.6e-88 328.6 199 77.4
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 4.7e-88 328.2 196 77.6
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 4.7e-88 328.2 198 75.8
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 4.7e-88 328.2 198 75.8
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 4.7e-88 328.2 199 78.4
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 6.2e-88 327.8 198 75.8
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 1.1e-87 327.0 196 77.0
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 1.4e-87 326.6 198 75.3
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.4e-87 326.6 198 75.3
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 1.4e-87 326.6 191 78.0
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 1.8e-87 326.2 199 78.4
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 4.0e-87 325.1 199 77.4
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 5.2e-87 324.7 199 77.4
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 6.8e-87 324.3 192 77.1
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 8.9e-87 323.9 207 72.5
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 8.9e-87 323.9 192 78.6
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 1.5e-86 323.2 199 76.4
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 2.6e-86 322.4 199 75.4
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 2.6e-86 322.4 199 76.4
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 2.6e-86 322.4 199 76.4
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 2.6e-86 322.4 199 75.9
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 3.4e-86 322.0 199 75.9
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 3.4e-86 322.0 199 76.4
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 3.4e-86 322.0 199 76.4
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 5.8e-86 321.2 199 75.9
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 5.8e-86 321.2 195 77.9
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 5.8e-86 321.2 196 75.5
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 7.6e-86 320.9 199 75.9
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 1.3e-85 320.1 199 76.4
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 1.7e-85 319.7 199 75.9
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 1.7e-85 319.7 200 75.0
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 1.7e-85 319.7 199 76.4
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 1.7e-85 319.7 196 76.5
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 2.2e-85 319.3 199 74.9
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 2.2e-85 319.3 199 74.9
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 2.2e-85 319.3 199 75.4
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 2.9e-85 318.9 199 76.4
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 3.7e-85 318.5 199 75.9
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 8.3e-85 317.4 192 75.5
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 8.3e-85 317.4 192 75.5
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 1.1e-84 317.0 192 77.1
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 2.4e-84 315.8 192 75.5
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 4.1e-84 315.1 190 75.8
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 7.1e-84 314.3 199 74.4
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 2.1e-83 312.8 216 71.3
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 2.7e-83 312.4 219 68.9
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 3.5e-83 312.0 192 74.0
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 4.6e-83 311.6 188 76.6
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 6.0e-83 311.2 199 72.4
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 6.0e-83 311.2 199 75.4
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 1.3e-82 310.1 191 75.9
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 5.1e-82 308.1 219 68.5
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 6.6e-82 307.8 198 72.7
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 6.6e-82 307.8 199 71.4
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 8.6e-82 307.4 199 72.4
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 1.1e-81 307.0 199 71.4
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 1.5e-81 306.6 199 71.9
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 1.5e-81 306.6 199 71.9
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 1.5e-81 306.6 199 72.4
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 1.5e-81 306.6 176 80.7
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 2.5e-81 305.8 199 71.9
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 3.3e-81 305.4 198 71.7
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 3.3e-81 305.4 199 71.9
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 4.3e-81 305.1 199 71.4
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 1.2e-80 303.5 199 71.4
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 1.6e-80 303.1 212 68.9
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 3.6e-80 302.0 192 73.4
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 6.2e-80 301.2 193 71.0
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 8.1e-80 300.8 217 68.7
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 4.0e-79 298.5 247 60.3
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 1.2e-78 297.0 192 72.4
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 1.2e-78 297.0 189 73.5
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 2.0e-78 296.2 199 69.8
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 2.2e-77 292.7 224 63.8
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 1.4e-76 290.0 199 70.9
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 7.8e-75 284.3 194 69.1
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 1.7e-74 283.1 201 67.7
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 4.8e-72 275.0 159 79.9
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 3.1e-71 272.3 198 64.1
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 2.5e-65 252.7 167 72.5
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 4.5e-62 241.9 194 56.7
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 1.2e-59 233.8 198 57.6
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 3.9e-58 228.8 188 59.0
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 1.1e-57 227.3 201 56.7
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 3.1e-47 192.6 135 66.7
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 2.4e-39 166.4 155 52.9
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 8.2e-32 141.4 73 91.8
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 1.3e-29 134.0 86 70.9
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.1e-25 120.9 116 55.2
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 1.2e-22 110.9 70 74.3
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 5.0e-21 105.5 218 31.7
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 1.2e-19 100.9 218 29.8
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 1.0e-10 71.2 46 69.6
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 4.4e-09 65.9 211 24.2
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 4.8e-08 62.4 41 73.2


User provided reference genes

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