Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G159000 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 1.0e-229 799.7 384 100.0
Phvul.001G265100 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 1.2e-209 733.0 385 91.7
Phvul.004G062200 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 7.0e-207 723.8 384 91.1
Phvul.006G052100 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 5.0e-205 717.6 384 90.1
Phvul.001G264800 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 1.3e-197 693.0 382 89.0
Phvul.002G276000 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 5.1e-197 691.0 382 86.9
Phvul.001G264900 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 7.8e-190 667.2 386 85.8
Phvul.006G051600 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 1.0e-181 640.2 347 87.6
Phvul.004G062300 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 3.3e-180 635.2 336 90.2
Phvul.006G051800 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 7.6e-153 544.3 321 83.8
Phvul.006G051900 Phaseolus vulgaris HOM05D007822 ORTHO05D009360 3.0e-125 452.6 240 89.2
Glyma.16G161700 Glycine max HOM05D007822 ORTHO05D009360 6.1e-118 428.3 385 57.4
Glyma.15G092300 Glycine max HOM05D007822 ORTHO05D009360 6.6e-104 381.7 386 53.1
Medtr3g084690 Medicago truncatula HOM05D007822 ORTHO05D009360 3.4e-92 342.8 387 45.5
TPR.G18087 Trifolium pratense HOM05D007822 ORTHO05D009360 4.4e-92 342.4 383 45.4
Medtr1g016400 Medicago truncatula HOM05D007822 ORTHO05D009360 2.7e-89 333.2 379 46.4
Medtr1g017120 Medicago truncatula HOM05D007822 ORTHO05D009360 6.0e-89 332.0 379 46.2
Ca_08383_v3 Cicer arietinum L. HOM05D007822 ORTHO05D009360 8.6e-88 328.2 377 45.6
TPR.G18082 Trifolium pratense HOM05D007822 ORTHO05D009360 9.5e-87 324.7 383 43.9
TPR.G19769 Trifolium pratense HOM05D007822 ORTHO05D009360 5.2e-85 318.9 323 48.6
Dinv16858 Davidia involucrata HOM05D007822 ORTHO05D009360 5.8e-84 315.5 383 42.6
arahy.Tifrunner.gnm1.ann1.A760R9 Arachis hypogaea HOM05D007822 ORTHO05D009360 1.3e-83 314.3 392 44.6
Glyma.03G020200 Glycine max HOM05D007822 ORTHO05D009360 1.2e-78 297.7 393 43.8
TPR.G33992 Trifolium pratense HOM05D007822 ORTHO05D009360 4.0e-77 292.7 376 41.2
TPR.G34642 Trifolium pratense HOM05D007822 ORTHO05D009360 8.9e-77 291.6 406 40.9
VMungo1215G0886 Vigna mungo HOM05D007822 ORTHO05D009360 1.3e-75 287.7 388 41.2
arahy.Tifrunner.gnm1.ann1.HWH8LL Arachis hypogaea HOM05D007822 ORTHO05D009360 1.2e-73 281.2 385 42.1
arahy.Tifrunner.gnm1.ann1.6X56G5 Arachis hypogaea HOM05D007822 ORTHO05D009360 3.5e-73 279.6 368 42.7
Medtr2g450270 Medicago truncatula HOM05D007822 ORTHO05D009360 2.3e-72 276.9 388 39.9
arahy.Tifrunner.gnm1.ann1.JJB16R Arachis hypogaea HOM05D007822 ORTHO05D009360 1.4e-69 267.7 382 41.6
arahy.Tifrunner.gnm1.ann1.Z44N3D Arachis hypogaea HOM05D007822 ORTHO05D009360 1.4e-69 267.7 380 42.1
Lalb_Chr23g0273121 Lupinus albus HOM05D007822 ORTHO05D009360 5.2e-69 265.8 227 54.2
arahy.Tifrunner.gnm1.ann1.N9Y9CH Arachis hypogaea HOM05D007822 ORTHO05D009360 3.4e-68 263.1 390 40.0
Prupe.2G273800 Prunus persica HOM05D007822 ORTHO05D009360 5.8e-68 262.3 405 40.2
arahy.Tifrunner.gnm1.ann1.2QW5CK Arachis hypogaea HOM05D007822 ORTHO05D009360 1.3e-67 261.2 387 40.8
arahy.Tifrunner.gnm1.ann1.00A0K2 Arachis hypogaea HOM05D007822 ORTHO05D009360 2.2e-67 260.4 355 42.0
Lalb_Chr07g0186991 Lupinus albus HOM05D007822 ORTHO05D009360 4.9e-67 259.2 371 41.5
TPR.G34648 Trifolium pratense HOM05D007822 ORTHO05D009360 2.3e-64 250.4 313 43.5
arahy.Tifrunner.gnm1.ann1.30JHYY Arachis hypogaea HOM05D007822 ORTHO05D009360 5.6e-63 245.7 386 38.9
Rhsim01G0262200 Rhododendron simsii HOM05D007822 ORTHO05D009360 5.6e-63 245.7 387 36.2
Psat2g094240 Pisum sativum HOM05D007822 ORTHO05D009360 2.1e-62 243.8 226 51.8
Oeu042537.1 Olea europaea HOM05D007822 ORTHO05D009360 2.0e-60 237.3 384 34.1
Rhsim09G0189100 Rhododendron simsii HOM05D007822 ORTHO05D009360 1.6e-57 227.6 391 35.3
arahy.Tifrunner.gnm1.ann1.GB1I3E Arachis hypogaea HOM05D007822 ORTHO05D009360 2.7e-57 226.9 384 36.2
arahy.Tifrunner.gnm1.ann1.SE6DU5 Arachis hypogaea HOM05D007822 ORTHO05D009360 3.3e-55 219.9 238 46.2
arahy.Tifrunner.gnm1.ann1.B28JH2 Arachis hypogaea HOM05D007822 ORTHO05D009360 2.0e-52 210.7 304 41.1
Sc09g0001470 Simmondsia chinensis HOM05D007822 ORTHO05D009360 5.5e-50 202.6 403 33.5
Sc09g0001460 Simmondsia chinensis HOM05D007822 ORTHO05D009360 1.2e-49 201.4 397 33.2
Rhsim09G0015300 Rhododendron simsii HOM05D007822 ORTHO05D009360 1.8e-48 197.6 393 35.1
arahy.Tifrunner.gnm1.ann1.97QIN4 Arachis hypogaea HOM05D007822 ORTHO05D009360 3.0e-48 196.8 251 43.0
arahy.Tifrunner.gnm1.ann1.IQQ1WH Arachis hypogaea HOM05D007822 ORTHO05D009360 8.2e-46 188.7 201 48.3
arahy.Tifrunner.gnm1.ann1.UXA4FW Arachis hypogaea HOM05D007822 ORTHO05D009360 2.6e-44 183.7 323 35.6
arahy.Tifrunner.gnm1.ann1.UHL69B Arachis hypogaea HOM05D007822 ORTHO05D009360 2.9e-43 180.3 254 41.3
Medtr6g034615 Medicago truncatula HOM05D007822 ORTHO05D009360 1.3e-40 171.4 170 47.1
VMungo1309G2027 Vigna mungo HOM05D007822 ORTHO05D009360 7.4e-39 165.6 244 38.5
TPR.G33966 Trifolium pratense HOM05D007822 ORTHO05D009360 3.7e-38 163.3 127 54.3
TPR.G19772 Trifolium pratense HOM05D007822 ORTHO05D009360 9.0e-37 158.7 195 40.5
DCAR_014640 Daucus carota HOM05D007822 ORTHO05D009360 3.0e-32 143.7 204 39.7
arahy.Tifrunner.gnm1.ann1.LY7S5B Arachis hypogaea HOM05D007822 ORTHO05D009360 3.9e-32 143.3 295 32.5
TPR.G11880 Trifolium pratense HOM05D000005 ORTHO05D009360 3.3e-31 140.2 173 41.0
Psat5g099000 Pisum sativum HOM05D007822 ORTHO05D009360 3.1e-29 133.7 125 48.8
RhsimUnG0026200 Rhododendron simsii HOM05D007822 ORTHO05D009360 9.1e-29 132.1 189 38.1
arahy.Tifrunner.gnm1.ann1.JV62Q3 Arachis hypogaea HOM05D007822 ORTHO05D009360 1.4e-24 118.2 130 45.4
Lalb_Chr23g0273131 Lupinus albus HOM05D007822 ORTHO05D009360 3.0e-24 117.1 103 55.3
TPR.G18088 Trifolium pratense HOM05D007822 ORTHO05D009360 6.3e-22 109.4 92 52.2
Lalb_Chr23g0273141 Lupinus albus HOM05D007822 ORTHO05D009360 1.1e-21 108.6 101 51.5
Rhsim10G0180500 Rhododendron simsii HOM05D007822 ORTHO05D009360 4.5e-20 103.2 219 32.0
Medtr6g060160 Medicago truncatula HOM05D007822 ORTHO05D009360 2.2e-19 100.9 146 39.0
TPR.G8151 Trifolium pratense HOM05D007822 ORTHO05D009360 4.2e-18 96.7 155 39.4
Lalb_Chr23g0273151 Lupinus albus HOM05D007822 ORTHO05D009360 6.1e-17 92.8 78 55.1
TPR.G19764 Trifolium pratense HOM05D007822 ORTHO05D009360 7.9e-17 92.4 119 41.2
Medtr6g034605 Medicago truncatula HOM05D007822 ORTHO05D009360 1.8e-16 91.3 107 40.2
Psat5g098960 Pisum sativum HOM05D007822 ORTHO05D009360 5.2e-16 89.7 126 38.1
TAR371G0827 Trochodendron aralioides HOM05D002420 ORTHO05D002422 1.5e-15 88.2 312 24.0
TPR.G24719 Trifolium pratense HOM05D007822 ORTHO05D009360 9.7e-15 85.5 122 40.2
TPR.G5267 Trifolium pratense HOM05D007822 ORTHO05D009360 6.3e-14 82.8 346 23.7
Medtr3g084700 Medicago truncatula HOM05D007822 ORTHO05D009360 1.8e-13 81.3 120 40.8
Medtr3g084660 Medicago truncatula HOM05D007822 ORTHO05D009360 4.1e-13 80.1 127 38.6
arahy.Tifrunner.gnm1.ann1.WW5NKJ Arachis hypogaea HOM05D007822 ORTHO05D009360 1.6e-12 78.2 73 50.7
CiPaw.01G036300 Carya illinoinensis HOM05D002420 ORTHO05D002422 2.6e-12 77.4 211 30.3
QL06p045688 Quercus lobata HOM05D002420 ORTHO05D002422 4.5e-12 76.6 204 29.9
AUR62003166 Chenopodium quinoa HOM05D002420 ORTHO05D002422 1.0e-11 75.5 210 30.5
Ciclev10020526m.g Citrus clementina HOM05D002420 ORTHO05D002422 1.0e-11 75.5 318 21.7
HPP92_017256 Vanilla planifolia HOM05D007162 ORTHO05D007631 2.9e-11 73.9 398 20.4
QL93p0073_1187 Quercus lobata HOM05D002420 ORTHO05D002422 5.0e-11 73.2 342 20.5
Sc19g0005840 Simmondsia chinensis HOM05D022095 ORTHO05D009360 1.1e-10 72.0 192 28.6
GSVIVG01018983001 Vitis vinifera HOM05D002420 ORTHO05D002422 1.5e-10 71.6 200 30.5
AUR62007985 Chenopodium quinoa HOM05D001579 ORTHO05D003470 1.9e-10 71.2 204 30.4
CiPaw.01G036200 Carya illinoinensis HOM05D002420 ORTHO05D002422 3.2e-10 70.5 329 24.3
AUR62003167 Chenopodium quinoa HOM05D002420 ORTHO05D002422 3.2e-10 70.5 288 27.8
QL05p077107 Quercus lobata HOM05D002420 ORTHO05D002422 3.2e-10 70.5 344 20.1
Lj6g0014268 Lotus japonicus HOM05D007162 ORTHO05D007631 4.2e-10 70.1 340 21.8
C02p57550 Brassica napus HOM05D007162 ORTHO05D007631 5.5e-10 69.7 382 23.0
Cfa004296 Carpinus fangiana HOM05D002420 ORTHO05D002422 1.2e-09 68.6 209 28.2
BolC2t11828H Brassica oleracea HOM05D007162 ORTHO05D007631 2.7e-09 67.4 382 22.8
RcHm_v2.0_Chr2g0101881 Rosa chinensis HOM05D002420 ORTHO05D002422 3.6e-09 67.0 203 27.1
Medtr8g080950 Medicago truncatula HOM05D007822 ORTHO05D009360 6.1e-09 66.2 181 25.4
BcaC03g17742 Brassica carinata HOM05D007162 ORTHO05D007631 8.0e-09 65.9 382 22.8
FvH4_4g20690 Fragaria vesca HOM05D007162 ORTHO05D007631 8.0e-09 65.9 340 22.4
Lalb_Chr16g0386521 Lupinus albus HOM05D002420 ORTHO05D002422 8.0e-09 65.9 309 22.7
Duzib147G0753 Durio zibethinus HOM05D002420 ORTHO05D002422 1.0e-08 65.5 277 25.3
Sc01g0006370 Simmondsia chinensis HOM05D022095 ORTHO05D009360 1.0e-08 65.5 100 33.0
MD02G1150300 Malus domestica HOM05D002420 ORTHO05D002422 1.4e-08 65.1 201 25.9
Manes.18G080800 Manihot esculenta HOM05D002420 ORTHO05D002422 1.8e-08 64.7 209 27.8
AUR62032769 Chenopodium quinoa HOM05D007162 ORTHO05D007631 2.3e-08 64.3 311 22.2
Cc07_g09370 Coffea canephora HOM05D002420 ORTHO05D002422 2.3e-08 64.3 200 26.0
PSO541G4811 Papaver somniferum HOM05D008326 ORTHO05D001155 2.3e-08 64.3 336 21.4
Sc13g0007060 Simmondsia chinensis HOM05D007162 ORTHO05D007631 2.3e-08 64.3 338 21.3
Atru.chr3.556 Acer truncatum HOM05D002420 ORTHO05D002422 3.0e-08 63.9 199 27.1
FAN07G2689 Fragaria x ananassa HOM05D007162 ORTHO05D007631 3.0e-08 63.9 340 22.1
MBI19_g03280_MAGBIO Magnolia biondii HOM05D002153 ORTHO05D002137 3.0e-08 63.9 350 21.7
BraA02t08804Z Brassica rapa HOM05D007162 ORTHO05D007631 4.0e-08 63.5 342 22.5
Duzib187G1349 Durio zibethinus HOM05D002420 ORTHO05D002422 4.0e-08 63.5 281 22.8
Medtr8g063930 Medicago truncatula HOM05D003615 ORTHO05D004858 4.0e-08 63.5 97 39.2
BcaB07g34165 Brassica carinata HOM05D007162 ORTHO05D007631 6.7e-08 62.8 338 23.1
Sc09g0004440 Simmondsia chinensis HOM05D000664 ORTHO05D000491 6.7e-08 62.8 217 25.8
Actinidia08199 Actinidia chinensis HOM05D007822 ORTHO05D009360 8.8e-08 62.4 106 34.9
Haze_15106 Corylus avellana HOM05D002420 ORTHO05D002422 8.8e-08 62.4 364 23.1
Prupe.7G153000 Prunus persica HOM05D002420 ORTHO05D002422 1.2e-07 62.0 194 28.4
Sc06g0004600 Simmondsia chinensis HOM05D022095 ORTHO05D009360 1.2e-07 62.0 139 30.2
A02p38240 Brassica napus HOM05D007162 ORTHO05D007631 1.5e-07 61.6 340 22.4
CSS0031662 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 1.5e-07 61.6 211 28.9
QL04p019537 Quercus lobata HOM05D000007 ORTHO05D000039 1.5e-07 61.6 329 25.8
AUR62041427 Chenopodium quinoa HOM05D000664 ORTHO05D000491 2.0e-07 61.2 212 25.9
Hma1.2p1_0901F.1_g234670 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 2.0e-07 61.2 365 23.6
Hma1.2p1_0901F.1_g234685 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 2.0e-07 61.2 365 23.6
Hma1.2p1_1150F.1_g261840 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 2.0e-07 61.2 365 23.6
AUR62016246 Chenopodium quinoa HOM05D007162 ORTHO05D007631 2.6e-07 60.8 312 22.1
FvH4_1g13490 Fragaria vesca HOM05D002420 ORTHO05D002422 2.6e-07 60.8 205 26.8
FAN12G3043 Fragaria x ananassa HOM05D007162 ORTHO05D007631 2.6e-07 60.8 340 22.4
FAN19G1318 Fragaria x ananassa HOM05D002420 ORTHO05D002422 2.6e-07 60.8 205 26.8
PSO675G2940 Papaver somniferum HOM05D000007 ORTHO05D000017 2.6e-07 60.8 397 22.4
SalBow8G4721 Salvia bowleyana HOM05D007162 ORTHO05D007631 2.6e-07 60.8 313 22.4
Hma1.2p1_1292F.1_g273710 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 3.3e-07 60.5 346 20.5
Duzib147G0480 Durio zibethinus HOM05D002420 ORTHO05D002422 4.4e-07 60.1 378 22.2
Duzib177G0294 Durio zibethinus HOM05D000664 ORTHO05D000491 5.7e-07 59.7 204 25.0
Sp2g19920 Schrenkiella parvula HOM05D007162 ORTHO05D007631 5.7e-07 59.7 350 23.1
Thecc.01G037600 Theobroma cacao HOM05D002420 ORTHO05D002422 7.5e-07 59.3 252 23.4
CSS0006010 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 9.7e-07 58.9 211 28.0
Migut.H02492 Erythranthe guttata HOM05D002420 ORTHO05D002422 9.7e-07 58.9 112 33.0
Lj4g0009025 Lotus japonicus HOM05D002420 ORTHO05D002422 9.7e-07 58.9 222 24.3
Oeu052874.1 Olea europaea HOM05D000007 ORTHO05D000017 9.7e-07 58.9 332 25.3
PSO536G0001 Papaver somniferum HOM05D000007 ORTHO05D000017 9.7e-07 58.9 328 22.0
PSO832G1012 Papaver somniferum HOM05D000007 ORTHO05D000017 9.7e-07 58.9 328 22.0
PSO832G3836 Papaver somniferum HOM05D000007 ORTHO05D000017 9.7e-07 58.9 328 22.0
EL10Ac3g05554 Beta vulgaris HOM05D007162 ORTHO05D007631 1.3e-06 58.5 344 21.5
Medtr3g070037 Medicago truncatula HOM05D007822 ORTHO05D009360 1.3e-06 58.5 49 55.1
HanXRQChr04g0121411 Helianthus annuus HOM05D001729 ORTHO05D001155 1.7e-06 58.2 314 24.8
SGA_v2.0_scaffold157G37347 Striga asiatica HOM05D007162 ORTHO05D007631 1.7e-06 58.2 310 21.9
CANSAT01G0893 Cannabis sativa HOM05D002420 ORTHO05D002422 2.2e-06 57.8 204 27.5
QL02p081705 Quercus lobata HOM05D000007 ORTHO05D000039 2.2e-06 57.8 299 22.7
Aa31LG9G10090 Aethionema arabicum HOM05D000007 ORTHO05D000017 2.8e-06 57.4 190 28.9
CSS0003240 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 2.8e-06 57.4 211 27.5
Migut.L00613 Erythranthe guttata HOM05D000007 ORTHO05D000017 2.8e-06 57.4 374 21.9
FAN28G0805 Fragaria x ananassa HOM05D002420 ORTHO05D002422 2.8e-06 57.4 112 32.1
ClCG07G009080 Citrullus lanatus HOM05D002420 ORTHO05D002422 3.7e-06 57.0 204 26.5
Migut.L00223 Erythranthe guttata HOM05D000007 ORTHO05D000017 3.7e-06 57.0 374 21.9
Migut.N00599 Erythranthe guttata HOM05D000007 ORTHO05D005385 4.8e-06 56.6 251 25.5
FvH4_1g13470 Fragaria vesca HOM05D002420 ORTHO05D002422 4.8e-06 56.6 112 32.1
FAN19G1320 Fragaria x ananassa HOM05D002420 ORTHO05D002422 4.8e-06 56.6 112 32.1
Gorai.010G008800 Gossypium raimondii HOM05D000007 ORTHO05D000017 4.8e-06 56.6 258 25.6
QL03p005922 Quercus lobata HOM05D000007 ORTHO05D000039 4.8e-06 56.6 411 20.7
QL04p064442 Quercus lobata HOM05D000007 ORTHO05D000039 4.8e-06 56.6 411 20.7
FAN23G1316 Fragaria x ananassa HOM05D002420 ORTHO05D002422 6.3e-06 56.2 153 28.1
HanXRQChr02g0054011 Helianthus annuus HOM05D002420 ORTHO05D002422 6.3e-06 56.2 209 26.8
FvH4_1g13480 Fragaria vesca HOM05D002420 ORTHO05D002422 8.2e-06 55.8 109 33.0
FAN26G2215 Fragaria x ananassa HOM05D002420 ORTHO05D002422 8.2e-06 55.8 109 33.0
Gohir.A06G008600 Gossypium hirsutum HOM05D000007 ORTHO05D000017 8.2e-06 55.8 229 26.2
PSO087G0001 Papaver somniferum HOM05D008326 ORTHO05D001155 8.2e-06 55.8 222 25.2


User provided reference genes

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