Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G117700 Phaseolus vulgaris HOM05D011527 ORTHO05D009491 8.8e-162 573.5 286 100.0
Phvul.007G129300 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 8.7e-69 264.6 316 50.3
Phvul.L003637 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 5.3e-58 228.8 239 54.0
Phvul.006G191400 Phaseolus vulgaris HOM05D011527 ORTHO05D009491 2.8e-51 206.5 251 48.2
Phvul.006G016100 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 3.2e-47 193.0 258 43.4
Phvul.005G095200 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 1.2e-46 191.0 235 50.6
Phvul.007G155600 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 1.1e-44 184.5 253 46.6
Phvul.005G096800 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 2.4e-42 176.8 252 40.9
Phvul.008G122133 Phaseolus vulgaris HOM05D011527 ORTHO05D009491 2.2e-40 170.2 134 62.7
Phvul.007G143500 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 8.5e-40 168.3 248 39.9
Phvul.001G105000 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 5.9e-33 145.6 174 47.7
Phvul.010G059600 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 1.8e-29 134.0 342 32.5
TPR.G40139 Trifolium pratense HOM05D000096 ORTHO05D000045 5.7e-28 129.0 182 37.9
Medtr3g056270 Medicago truncatula HOM05D000353 ORTHO05D000174 1.3e-27 127.9 254 31.1
Medtr4g036240 Medicago truncatula HOM05D000353 ORTHO05D000174 1.3e-27 127.9 254 31.1
Phvul.001G109800 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 1.3e-27 127.9 247 34.4
Medtr6g445520 Medicago truncatula HOM05D000353 ORTHO05D000174 7.0e-26 122.1 136 41.9
Medtr2g008650 Medicago truncatula HOM05D000353 ORTHO05D000174 5.9e-25 119.0 256 28.9
Medtr8g479260 Medicago truncatula HOM05D000353 ORTHO05D000174 5.9e-25 119.0 256 28.9
Medtr2g048560 Medicago truncatula HOM05D000353 ORTHO05D000174 2.2e-24 117.1 135 42.2
TPR.G7855 Trifolium pratense HOM05D000096 ORTHO05D000045 6.5e-24 115.5 137 40.1
Lj3g0013474 Lotus japonicus HOM05D000353 ORTHO05D000174 1.5e-23 114.4 225 33.3
Phvul.009G015800 Phaseolus vulgaris HOM05D011527 ORTHO05D009491 8.0e-22 108.6 67 74.6
TPR.G36881 Trifolium pratense HOM05D011524 ORTHO05D009491 5.2e-21 105.9 140 35.0
Lj6g0022193 Lotus japonicus HOM05D010643 ORTHO05D013332 2.6e-20 103.6 177 36.2
TPR.G26714 Trifolium pratense HOM05D011524 ORTHO05D009491 2.6e-20 103.6 140 37.1
TPR.G19823 Trifolium pratense HOM05D011527 ORTHO05D009491 3.4e-20 103.2 140 37.1
Lj6g0004966 Lotus japonicus HOM05D011527 ORTHO05D009491 5.7e-20 102.4 141 36.9
Lj1g0004030 Lotus japonicus HOM05D000353 ORTHO05D000174 7.5e-20 102.1 139 39.6
TPR.G17919 Trifolium pratense HOM05D011527 ORTHO05D009491 1.3e-19 101.3 135 37.0
arahy.Tifrunner.gnm1.ann1.H3FPA3 Arachis hypogaea HOM05D010000 ORTHO05D009491 1.7e-19 100.9 117 41.0
arahy.Tifrunner.gnm1.ann1.CPRZ31 Arachis hypogaea HOM05D000353 ORTHO05D000174 2.2e-19 100.5 234 28.6
TPR.G34472 Trifolium pratense HOM05D011524 ORTHO05D009491 2.2e-19 100.5 151 35.8
TPR.G35040 Trifolium pratense HOM05D011524 ORTHO05D009491 4.8e-19 99.4 137 37.2
arahy.Tifrunner.gnm1.ann1.J9NJUF Arachis hypogaea HOM05D000353 ORTHO05D000174 8.3e-19 98.6 234 27.8
arahy.Tifrunner.gnm1.ann1.LSFF47 Arachis hypogaea HOM05D000353 ORTHO05D000174 8.3e-19 98.6 234 27.8
Phvul.005G044800 Phaseolus vulgaris HOM05D011527 ORTHO05D009491 1.4e-18 97.8 162 42.6
arahy.Tifrunner.gnm1.ann1.Y6YSHD Arachis hypogaea HOM05D000353 ORTHO05D000174 9.1e-18 95.1 234 27.8
TPR.G20476 Trifolium pratense HOM05D011524 ORTHO05D009491 2.0e-17 94.0 146 34.2
arahy.Tifrunner.gnm1.ann1.AKH4BK Arachis hypogaea HOM05D000353 ORTHO05D000174 5.9e-17 92.4 95 38.9
arahy.Tifrunner.gnm1.ann1.IYP2GG Arachis hypogaea HOM05D000353 ORTHO05D000174 5.9e-17 92.4 95 38.9
arahy.Tifrunner.gnm1.ann1.SFEY24 Arachis hypogaea HOM05D000353 ORTHO05D000174 7.7e-17 92.0 179 34.1
Medtr2g048550 Medicago truncatula HOM05D000353 ORTHO05D000174 5.0e-16 89.4 84 42.9
LjContig00155g0001945 Lotus japonicus HOM05D000353 ORTHO05D000174 1.5e-15 87.8 88 42.0
TPR.G10066 Trifolium pratense HOM05D011527 ORTHO05D009491 1.9e-15 87.4 70 45.7
TPR.G34060 Trifolium pratense HOM05D011527 ORTHO05D009491 2.5e-15 87.0 135 34.8
Lj3g0016345 Lotus japonicus HOM05D000353 ORTHO05D000174 9.5e-15 85.1 213 27.2
Medtr5g078250 Medicago truncatula HOM05D000353 ORTHO05D000174 9.5e-15 85.1 248 27.8
Glyma.05G083400 Glycine max HOM05D000353 ORTHO05D000174 2.1e-14 84.0 181 31.5
Medtr4g040040 Medicago truncatula HOM05D011527 ORTHO05D000174 3.6e-14 83.2 71 42.3
TPR.G27579 Trifolium pratense HOM05D007499 ORTHO05D009491 3.6e-14 83.2 219 26.0
TPR.G30682 Trifolium pratense HOM05D000096 ORTHO05D000045 3.6e-14 83.2 91 41.8
TPR.G16855 Trifolium pratense HOM05D007499 ORTHO05D009491 6.8e-13 79.0 87 37.9
TPR.G14129 Trifolium pratense HOM05D007499 ORTHO05D009491 1.5e-12 77.8 88 36.4
TPR.G15524 Trifolium pratense HOM05D007499 ORTHO05D009491 2.6e-12 77.0 81 39.5
Medtr8g062030 Medicago truncatula HOM05D000353 ORTHO05D000174 4.4e-12 76.3 78 38.5
TPR.G30051 Trifolium pratense HOM05D000023 ORTHO05D009491 5.7e-12 75.9 85 37.6
Medtr1g075850 Medicago truncatula HOM05D000353 ORTHO05D000174 7.5e-12 75.5 205 28.3
TPR.G14905 Trifolium pratense HOM05D007499 ORTHO05D009491 9.8e-12 75.1 97 42.3
TPR.G38513 Trifolium pratense HOM05D007499 ORTHO05D009491 9.8e-12 75.1 75 41.3
TPR.G39019 Trifolium pratense HOM05D007499 ORTHO05D009491 1.7e-11 74.3 95 33.7
TPR.G26497 Trifolium pratense HOM05D007499 ORTHO05D009491 2.8e-11 73.6 87 33.3
TPR.G8670 Trifolium pratense HOM05D007499 ORTHO05D009491 2.8e-11 73.6 90 33.3
LjContig00141g0027033 Lotus japonicus HOM05D007499 ORTHO05D000174 6.3e-11 72.4 83 37.3
Medtr4g046077 Medicago truncatula HOM05D007499 ORTHO05D000174 1.1e-10 71.6 221 25.3
TPR.G17763 Trifolium pratense HOM05D007499 ORTHO05D009491 1.1e-10 71.6 84 40.5
TPR.G16657 Trifolium pratense HOM05D011524 ORTHO05D009491 1.4e-10 71.2 93 36.6
TPR.G8849 Trifolium pratense HOM05D007499 ORTHO05D009491 1.4e-10 71.2 84 34.5
Lj6g0015688 Lotus japonicus HOM05D007499 ORTHO05D000174 1.8e-10 70.9 89 32.6
LjContig00357g0026360 Lotus japonicus HOM05D007499 ORTHO05D009491 1.8e-10 70.9 83 36.1
arahy.Tifrunner.gnm1.ann1.GFA6QK Arachis hypogaea HOM05D007499 ORTHO05D009491 2.4e-10 70.5 140 28.6
Lj1g0003435 Lotus japonicus HOM05D007499 ORTHO05D000174 2.4e-10 70.5 83 36.1
LjContig00081g0005726 Lotus japonicus HOM05D007499 ORTHO05D000174 2.4e-10 70.5 83 36.1
TPR.G39727 Trifolium pratense HOM05D028938 ORTHO05D009491 2.4e-10 70.5 83 34.9
Medtr6g051890 Medicago truncatula HOM05D000353 ORTHO05D000174 4.1e-10 69.7 69 37.7
TPR.G27599 Trifolium pratense HOM05D007499 ORTHO05D009491 4.1e-10 69.7 83 34.9
Lj1g0026764 Lotus japonicus HOM05D029886 ORTHO05D030008 5.4e-10 69.3 149 29.5
Lj5g0012270 Lotus japonicus HOM05D007499 ORTHO05D000174 5.4e-10 69.3 83 34.9
arahy.Tifrunner.gnm1.ann1.CT1CGZ Arachis hypogaea HOM05D007499 ORTHO05D009491 7.0e-10 68.9 140 27.9
BolC6t35509H Brassica oleracea HOM05D000353 ORTHO05D000174 7.0e-10 68.9 142 30.3
Ca_18497_v3 Cicer arietinum L. HOM05D048157 ORTHO05D044361 7.0e-10 68.9 89 36.0
Lj6g0015228 Lotus japonicus HOM05D007499 ORTHO05D000174 7.0e-10 68.9 86 36.0
TPR.G38734 Trifolium pratense HOM05D027356 ORTHO05D009491 7.0e-10 68.9 83 34.9
arahy.Tifrunner.gnm1.ann1.5G8KYG Arachis hypogaea HOM05D000353 ORTHO05D000174 9.2e-10 68.6 86 34.9
TPR.G18344 Trifolium pratense HOM05D007499 ORTHO05D009491 1.6e-09 67.8 161 26.7
A05p21320 Brassica napus HOM05D000353 ORTHO05D000174 2.7e-09 67.0 142 31.7
BraA05t21040Z Brassica rapa HOM05D000353 ORTHO05D000174 2.7e-09 67.0 142 31.7
Ca_20369_v3 Cicer arietinum L. HOM05D048157 ORTHO05D044361 2.7e-09 67.0 88 35.2
Lj4g0003601 Lotus japonicus HOM05D000353 ORTHO05D000174 2.7e-09 67.0 154 31.8
TPR.G16048 Trifolium pratense HOM05D001993 ORTHO05D004040 2.7e-09 67.0 76 36.8
BcaC05g27207 Brassica carinata HOM05D000353 ORTHO05D000174 3.5e-09 66.6 142 31.7
BolC5t31838H Brassica oleracea HOM05D000353 ORTHO05D000174 3.5e-09 66.6 142 31.7
AUR62030467 Chenopodium quinoa HOM05D008127 ORTHO05D010494 3.5e-09 66.6 144 27.8
ECA247G2253 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.5e-09 66.6 170 31.2
Lj3g0013581 Lotus japonicus HOM05D007499 ORTHO05D000174 4.5e-09 66.2 190 27.4
TPR.G14684 Trifolium pratense HOM05D007499 ORTHO05D000174 4.5e-09 66.2 76 36.8
TPR.G40188 Trifolium pratense HOM05D007499 ORTHO05D009491 4.5e-09 66.2 68 38.2
arahy.Tifrunner.gnm1.ann1.HP5C5B Arachis hypogaea HOM05D012160 ORTHO05D009491 5.9e-09 65.9 141 28.4
A03p67580 Brassica napus HOM05D000353 ORTHO05D000174 7.8e-09 65.5 142 32.4
QL03p038017 Quercus lobata HOM05D000313 ORTHO05D000065 7.8e-09 65.5 138 26.8
TPR.G39726 Trifolium pratense HOM05D007499 ORTHO05D009491 7.8e-09 65.5 76 35.5
C09p17500 Brassica napus HOM05D000353 ORTHO05D000174 1.0e-08 65.1 142 31.7
TPR.G33583 Trifolium pratense HOM05D011527 ORTHO05D009491 1.0e-08 65.1 148 27.7
TPR.G9150 Trifolium pratense HOM05D007499 ORTHO05D000174 1.0e-08 65.1 76 35.5
BolC4t26686H Brassica oleracea HOM05D000353 ORTHO05D000174 1.3e-08 64.7 142 31.7
QL03p025410 Quercus lobata HOM05D000005 ORTHO05D000065 1.7e-08 64.3 198 23.7
arahy.Tifrunner.gnm1.ann1.6R53Z4 Arachis hypogaea HOM05D007334 ORTHO05D009978 2.3e-08 63.9 84 35.7
BolC8t47319H Brassica oleracea HOM05D000353 ORTHO05D000174 2.3e-08 63.9 142 31.7
BcaNung06211 Brassica carinata HOM05D000353 ORTHO05D000174 2.9e-08 63.5 143 30.1
C03p63100 Brassica napus HOM05D000353 ORTHO05D000174 2.9e-08 63.5 142 31.0
Thhalv10003062m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.9e-08 63.5 224 25.9
Lj1g0016702 Lotus japonicus HOM05D007499 ORTHO05D000174 2.9e-08 63.5 83 32.5
BcaB05g23882 Brassica carinata HOM05D000353 ORTHO05D010037 3.8e-08 63.2 206 23.8
BolC5t34017H Brassica oleracea HOM05D000353 ORTHO05D000174 3.8e-08 63.2 142 31.7
BolC1t00856H Brassica oleracea HOM05D000353 ORTHO05D010037 5.0e-08 62.8 152 26.3
BolC1t03913H Brassica oleracea HOM05D000353 ORTHO05D010037 5.0e-08 62.8 152 26.3
BolC5t34002H Brassica oleracea HOM05D000353 ORTHO05D000174 6.6e-08 62.4 142 31.0
A02p28640 Brassica napus HOM05D000353 ORTHO05D000174 8.6e-08 62.0 142 30.3
TPR.G18480 Trifolium pratense HOM05D011524 ORTHO05D009491 8.6e-08 62.0 48 52.1
BolC5t32309H Brassica oleracea HOM05D000353 ORTHO05D000174 1.1e-07 61.6 142 31.0
arahy.Tifrunner.gnm1.ann1.7NF8CM Arachis hypogaea HOM05D007334 ORTHO05D009978 1.5e-07 61.2 90 27.8
C09p49200 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-07 61.2 142 31.7
Ah.02g115000 Amaranthus hybridus HOM05D000353 ORTHO05D002376 2.5e-07 60.5 93 39.8
Medtr2g450180 Medicago truncatula HOM05D011527 ORTHO05D009491 2.5e-07 60.5 41 43.9
TPR.G39470 Trifolium pratense HOM05D007499 ORTHO05D009491 2.5e-07 60.5 72 33.3
BolC5t28801H Brassica oleracea HOM05D000353 ORTHO05D000174 3.3e-07 60.1 91 38.5
BraA01t02748Z Brassica rapa HOM05D000353 ORTHO05D000174 3.3e-07 60.1 91 38.5
DCAR_007681 Daucus carota HOM05D002907 ORTHO05D000065 3.3e-07 60.1 81 38.3
DCAR_025606 Daucus carota HOM05D012849 ORTHO05D000065 3.3e-07 60.1 104 33.7
DCAR_031592 Daucus carota HOM05D002907 ORTHO05D000065 3.3e-07 60.1 75 37.3
Lj5g0027118 Lotus japonicus HOM05D007499 ORTHO05D010522 3.3e-07 60.1 103 34.0
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 4.3e-07 59.7 101 33.7
C02p27610 Brassica napus HOM05D000353 ORTHO05D000174 4.3e-07 59.7 132 31.8
CAN.G764.9 Capsicum annuum HOM05D002441 ORTHO05D002376 4.3e-07 59.7 144 30.6
Thhalv10029348m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 4.3e-07 59.7 183 26.2
BcaC05g29111 Brassica carinata HOM05D000353 ORTHO05D000174 5.6e-07 59.3 101 33.7
BolC5t34009H Brassica oleracea HOM05D000353 ORTHO05D000174 5.6e-07 59.3 101 33.7
Thhalv10000499m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 5.6e-07 59.3 119 31.1
BolC5t32061H Brassica oleracea HOM05D000353 ORTHO05D010037 7.3e-07 58.9 146 25.3
Thhalv10000424m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 7.3e-07 58.9 184 25.5
Lj5g0011370 Lotus japonicus HOM05D007499 ORTHO05D010522 7.3e-07 58.9 91 34.1
LjContig00564g0005268 Lotus japonicus HOM05D007499 ORTHO05D010522 7.3e-07 58.9 91 34.1
Ah.05g169550 Amaranthus hybridus HOM05D002441 ORTHO05D002376 9.5e-07 58.5 137 31.4
C05p29470 Brassica napus HOM05D009574 ORTHO05D000174 9.5e-07 58.5 161 28.6
BolC5t31677H Brassica oleracea HOM05D009574 ORTHO05D000174 9.5e-07 58.5 161 28.6
DCAR_011057 Daucus carota HOM05D002907 ORTHO05D000065 9.5e-07 58.5 91 36.3
ECA232G2412 Erigeron canadensis HOM05D000096 ORTHO05D000045 9.5e-07 58.5 93 31.2
Sopen06g010830 Solanum pennellii HOM05D002907 ORTHO05D005554 9.5e-07 58.5 70 40.0
arahy.Tifrunner.gnm1.ann1.T80IJN Arachis hypogaea HOM05D010809 ORTHO05D009978 1.2e-06 58.2 90 33.3
BcaB01g05981 Brassica carinata HOM05D009574 ORTHO05D012637 1.2e-06 58.2 97 36.1
C05p33350 Brassica napus HOM05D000353 ORTHO05D010037 1.2e-06 58.2 146 25.3
DCAR_010742 Daucus carota HOM05D002907 ORTHO05D000065 1.2e-06 58.2 81 38.3
BolC8t48495H Brassica oleracea HOM05D000353 ORTHO05D000174 1.6e-06 57.8 101 32.7
DCAR_031322 Daucus carota HOM05D002907 ORTHO05D000065 1.6e-06 57.8 72 38.9
Psat1g061440 Pisum sativum HOM05D005144 ORTHO05D006112 2.1e-06 57.4 72 41.7
BcaB06g27108 Brassica carinata HOM05D000353 ORTHO05D000174 2.8e-06 57.0 116 32.8
BcaC03g15183 Brassica carinata HOM05D000353 ORTHO05D000174 2.8e-06 57.0 102 31.4
Thhalv10029440m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.8e-06 57.0 188 26.1
Thhalv10029167m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 3.6e-06 56.6 182 24.7
LjContig00312_ERROPOS870357g0011073 Lotus japonicus HOM05D007499 ORTHO05D010522 3.6e-06 56.6 86 30.2
BcaC07g37519 Brassica carinata HOM05D000353 ORTHO05D000174 4.7e-06 56.2 188 25.0
DCAR_010369 Daucus carota HOM05D012849 ORTHO05D000065 4.7e-06 56.2 76 39.5
DCAR_031299 Daucus carota HOM05D000001 ORTHO05D000003 4.7e-06 56.2 91 36.3
Solyc06g034070.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 4.7e-06 56.2 65 41.5
Thhalv10002301m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 6.1e-06 55.8 177 26.6
HanXRQChr13g0403861 Helianthus annuus HOM05D003964 ORTHO05D000174 6.1e-06 55.8 174 27.6
HanXRQChr14g0436911 Helianthus annuus HOM05D003964 ORTHO05D000174 6.1e-06 55.8 174 27.6
Aqoxy2G01298 Aquilegia oxysepala HOM05D012322 ORTHO05D014819 8.0e-06 55.5 80 36.2
arahy.Tifrunner.gnm1.ann1.U768Z5 Arachis hypogaea HOM05D002441 ORTHO05D002376 8.0e-06 55.5 186 25.8
BraA09t40707Z Brassica rapa HOM05D000353 ORTHO05D000174 8.0e-06 55.5 156 30.8
ECA232G2690 Erigeron canadensis HOM05D000353 ORTHO05D000174 8.0e-06 55.5 91 35.2
Thhalv10019671m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 8.0e-06 55.5 119 29.4
Thhalv10023073m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 8.0e-06 55.5 115 29.6
Lj7A628T41 Lonicera japonica HOM05D002907 ORTHO05D000065 8.0e-06 55.5 108 29.6
Nitab4.5_0004863g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 8.0e-06 55.5 127 29.1


User provided reference genes

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