Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G111100 Phaseolus vulgaris HOM05D004647 ORTHO05D005349 6.5e-134 480.7 241 100.0
Phvul.002G091200 Phaseolus vulgaris HOM05D004647 ORTHO05D005349 1.4e-128 463.0 241 95.9
Glyma.02G112000 Glycine max HOM05D004647 ORTHO05D005349 2.6e-122 442.2 241 91.3
Glyma.01G053700 Glycine max HOM05D004647 ORTHO05D005349 7.7e-119 430.6 241 89.2
arahy.Tifrunner.gnm1.ann1.HI7WIW Arachis hypogaea HOM05D004647 ORTHO05D005349 3.6e-116 421.8 241 85.9
arahy.Tifrunner.gnm1.ann1.T8C5SJ Arachis hypogaea HOM05D004647 ORTHO05D005349 8.0e-116 420.6 241 85.9
TPR.G19928 Trifolium pratense HOM05D004647 ORTHO05D005349 6.8e-115 417.5 241 85.1
Lj2g0019057 Lotus japonicus HOM05D004647 ORTHO05D005349 1.5e-114 416.4 241 84.6
TPR.G14966 Trifolium pratense HOM05D004647 ORTHO05D005349 2.0e-114 416.0 241 85.5
Psat2g127400 Pisum sativum HOM05D004647 ORTHO05D005349 6.3e-113 411.0 241 85.5
Lalb_Chr10g0098541 Lupinus albus HOM05D004647 ORTHO05D005349 3.1e-112 408.7 241 83.8
Medtr5g043110 Medicago truncatula HOM05D004647 ORTHO05D005349 2.7e-111 405.6 241 82.6
Potri.012G080300 Populus trichocarpa HOM05D004647 ORTHO05D005349 1.0e-110 403.7 240 83.3
CiPaw.11G026900 Carya illinoinensis HOM05D004647 ORTHO05D005349 1.5e-109 399.8 240 81.7
Sabra12G0057400 Salix brachista HOM05D004647 ORTHO05D005349 1.9e-109 399.4 240 82.5
Ca_06453_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 8.0e-108 394.0 222 88.3
Gohir.A03G097600 Gossypium hirsutum HOM05D004647 ORTHO05D005349 3.0e-107 392.1 241 80.9
Gorai.005G137000 Gossypium raimondii HOM05D004647 ORTHO05D005349 5.2e-107 391.3 241 80.9
Gohir.D02G116700 Gossypium hirsutum HOM05D004647 ORTHO05D005349 1.3e-105 386.7 241 80.1
Ciclev10021986m.g Citrus clementina HOM05D004647 ORTHO05D005349 2.9e-105 385.6 241 78.0
GSVIVG01007738001 Vitis vinifera HOM05D004647 ORTHO05D005349 3.7e-105 385.2 231 83.1
Actinidia19099 Actinidia chinensis HOM05D004647 ORTHO05D005349 4.9e-105 384.8 241 77.6
Lj5A124T65 Lonicera japonica HOM05D004647 ORTHO05D005349 4.1e-104 381.7 236 80.1
QL10p011820 Quercus lobata HOM05D004647 ORTHO05D005349 5.4e-104 381.3 240 79.2
PGR083G2070 Punica granatum HOM05D004647 ORTHO05D005349 7.0e-104 380.9 241 76.8
Cc04_g13970 Coffea canephora HOM05D004647 ORTHO05D005349 9.2e-104 380.6 241 79.3
Rhsim12G0164400 Rhododendron simsii HOM05D004647 ORTHO05D005349 9.2e-104 380.6 241 76.8
RcHm_v2.0_Chr7g0193601 Rosa chinensis HOM05D004647 ORTHO05D005349 9.2e-104 380.6 229 82.1
ClCG06G016990 Citrullus lanatus HOM05D004647 ORTHO05D005349 1.2e-103 380.2 240 77.9
DCAR_016485 Daucus carota HOM05D004647 ORTHO05D005349 1.2e-103 380.2 238 76.9
Atru.chr9.2461 Acer truncatum HOM05D004647 ORTHO05D005349 2.7e-103 379.0 241 75.9
vmacro16607 Vaccinium macrocarpon HOM05D004647 ORTHO05D005349 2.7e-103 379.0 241 77.6
Prupe.5G174300 Prunus persica HOM05D004647 ORTHO05D005349 3.5e-103 378.6 240 76.7
ATR0680G372 Amborella trichopoda HOM05D004647 ORTHO05D005349 1.0e-102 377.1 241 76.3
Hma1.2p1_0701F.1_g205920 Hydrangea macrophylla HOM05D004647 ORTHO05D005349 3.0e-102 375.6 241 76.8
FAN04G0366 Fragaria x ananassa HOM05D004647 ORTHO05D005349 6.6e-102 374.4 228 81.6
FAN13G1078 Fragaria x ananassa HOM05D004647 ORTHO05D005349 6.6e-102 374.4 229 80.8
TWI15G0781 Tripterygium wilfordii HOM05D004647 ORTHO05D005349 8.6e-102 374.0 240 77.9
Eucgr.B00371 Eucalyptus grandis HOM05D004647 ORTHO05D005349 1.5e-101 373.2 241 76.8
FAN08G1047 Fragaria x ananassa HOM05D004647 ORTHO05D005349 1.9e-101 372.9 229 80.8
PSO478G0146 Papaver somniferum HOM05D004647 ORTHO05D005349 1.9e-101 372.9 240 75.8
PSO017G4490 Papaver somniferum HOM05D004647 ORTHO05D005349 2.5e-101 372.5 238 76.5
Carub.0004s0503 Capsella rubella HOM05D004647 ORTHO05D005349 9.5e-101 370.5 239 76.6
COL.COLO4_30028 Corchorus olitorius HOM05D004647 ORTHO05D005349 9.5e-101 370.5 274 70.4
FAN18G2734 Fragaria x ananassa HOM05D004647 ORTHO05D005349 9.5e-101 370.5 229 80.3
THA.LOC104807116 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 1.2e-100 370.2 239 76.2
THA.LOC104824976 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 1.2e-100 370.2 239 76.2
Aqoxy3G01032 Aquilegia oxysepala HOM05D004647 ORTHO05D005349 4.7e-100 368.2 236 76.7
HPP92_005895 Vanilla planifolia HOM05D004647 ORTHO05D005349 8.0e-100 367.5 235 74.0
Sed0013198 Sechium edule HOM05D004647 ORTHO05D005349 1.0e-99 367.1 240 75.8
CARHR059710 Cardamine hirsuta HOM05D004647 ORTHO05D005349 1.8e-99 366.3 239 74.9
Manes.14G066300 Manihot esculenta HOM05D004647 ORTHO05D005349 1.8e-99 366.3 212 84.9
MSTRG.11448 Avicennia marina HOM05D004647 ORTHO05D005349 3.1e-99 365.5 241 73.9
Migut.I00016 Erythranthe guttata HOM05D004647 ORTHO05D005349 8.9e-99 364.0 241 74.7
MBI16_g05634_MAGBIO Magnolia biondii HOM05D004647 ORTHO05D005349 1.2e-98 363.6 249 73.9
AL7G19680 Arabidopsis lyrata HOM05D004647 ORTHO05D005349 1.5e-98 363.2 239 74.5
CANSAT64G1060 Cannabis sativa HOM05D004647 ORTHO05D005349 1.5e-98 363.2 227 78.9
Oeu035987.1 Olea europaea HOM05D004647 ORTHO05D005349 1.5e-98 363.2 241 75.1
TWI53G1063 Tripterygium wilfordii HOM05D004647 ORTHO05D005349 2.0e-98 362.8 240 77.5
BcaC01g01036 Brassica carinata HOM05D004647 ORTHO05D005349 4.4e-98 361.7 239 74.9
QL02p100995 Quercus lobata HOM05D004647 ORTHO05D005349 4.4e-98 361.7 340 58.2
Nitab4.5_0000003g0580 Nicotiana tabacum HOM05D004647 ORTHO05D005349 7.5e-98 360.9 241 72.2
A08p18330 Brassica napus HOM05D004647 ORTHO05D005349 1.3e-97 360.1 239 74.5
BraA08t33790Z Brassica rapa HOM05D004647 ORTHO05D005349 1.3e-97 360.1 239 74.5
Lsat_1_v5_gn_4_75321 Lactuca sativa HOM05D004647 ORTHO05D005349 1.3e-97 360.1 242 74.4
Hund09433 Selenicereus undatus HOM05D004647 ORTHO05D005349 2.9e-97 359.0 241 74.7
Sp7g29960 Schrenkiella parvula HOM05D004647 ORTHO05D005349 4.9e-97 358.2 239 74.9
Sc10g0010060 Simmondsia chinensis HOM05D004647 ORTHO05D005349 4.9e-97 358.2 240 75.0
Thecc.03G011300 Theobroma cacao HOM05D004647 ORTHO05D005349 4.9e-97 358.2 213 82.6
BolC3t21057H Brassica oleracea HOM05D004647 ORTHO05D005349 1.4e-96 356.7 239 74.5
Nitab4.5_0000866g0170 Nicotiana tabacum HOM05D004647 ORTHO05D005349 2.4e-96 355.9 241 71.4
HanXRQChr16g0504011 Helianthus annuus HOM05D004647 ORTHO05D005349 5.4e-96 354.8 241 73.0
Sopen06g027740 Solanum pennellii HOM05D004647 ORTHO05D005349 5.4e-96 354.8 229 74.7
MD06G1174300 Malus domestica HOM05D004647 ORTHO05D005349 7.0e-96 354.4 240 73.3
Os01g0891400 Oryza sativa ssp. japonica HOM05D004647 ORTHO05D005349 1.2e-95 353.6 230 76.1
SGA_v2.0_scaffold90G27942 Striga asiatica HOM05D004647 ORTHO05D005349 1.6e-95 353.2 260 68.1
AT4G32175 Arabidopsis thaliana HOM05D004647 ORTHO05D005349 3.5e-95 352.1 236 73.7
Os01g0661400 Oryza sativa ssp. japonica HOM05D004647 ORTHO05D005349 6.0e-95 351.3 230 75.2
PGSC0003DMG400027091 Solanum tuberosum HOM05D004647 ORTHO05D005349 7.8e-95 350.9 229 73.4
AUR62030968 Chenopodium quinoa HOM05D004647 ORTHO05D005349 1.0e-94 350.5 241 72.6
Solyc06g071460.3 Solanum lycopersicum HOM05D004647 ORTHO05D005349 2.3e-94 349.4 232 73.7
BcaB03g12733 Brassica carinata HOM05D004647 ORTHO05D005349 3.9e-94 348.6 230 75.2
FvH4_5g05270 Fragaria vesca HOM05D004647 ORTHO05D005349 6.6e-94 347.8 211 81.5
CSS0008435 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 8.6e-94 347.4 241 72.2
AL4G16790 Arabidopsis lyrata HOM05D004647 ORTHO05D005349 1.1e-93 347.1 239 70.7
FAN18G2015 Fragaria x ananassa HOM05D004647 ORTHO05D005349 1.1e-93 347.1 284 64.8
TAR374G0909 Trochodendron aralioides HOM05D004647 ORTHO05D005349 1.1e-93 347.1 206 80.6
AT2G25355 Arabidopsis thaliana HOM05D004647 ORTHO05D005349 4.3e-93 345.1 239 70.7
HanXRQChr16g0526511 Helianthus annuus HOM05D004647 ORTHO05D005349 7.3e-93 344.4 240 71.7
Thhalv10026115m.g Eutrema salsugineum HOM05D004647 ORTHO05D005349 4.7e-92 341.7 239 70.7
EL10Ac5g10752 Beta vulgaris HOM05D004647 ORTHO05D005349 1.1e-91 340.5 228 74.6
CAN.G628.78 Capsicum annuum HOM05D004647 ORTHO05D005349 1.4e-91 340.1 241 68.5
CARHR240100 Cardamine hirsuta HOM05D004647 ORTHO05D005349 1.8e-91 339.7 239 69.0
unitig_52.g17486 Utricularia gibba HOM05D004647 ORTHO05D005349 1.8e-91 339.7 241 70.5
Zm00001eb157720 Zea mays HOM05D004647 ORTHO05D005349 1.8e-91 339.7 230 73.0
ECA232G2959 Erigeron canadensis HOM05D004647 ORTHO05D005349 1.5e-90 336.7 233 70.8
AUR62008215 Chenopodium quinoa HOM05D004647 ORTHO05D005349 9.8e-90 334.0 266 65.4
Cpa.g.sc124.56 Carica papaya HOM05D004647 ORTHO05D005349 2.9e-89 332.4 202 79.2
SalBow3G4197 Salvia bowleyana HOM05D004647 ORTHO05D005349 3.2e-88 328.9 283 61.5
DCAR_028017 Daucus carota HOM05D004647 ORTHO05D005349 7.1e-88 327.8 199 79.9
MD06G1174500 Malus domestica HOM05D004647 ORTHO05D005349 3.3e-85 318.9 242 68.2
CDE11G0116 Ceratophyllum demersum HOM05D004647 ORTHO05D005349 1.2e-84 317.0 213 73.2
Zm00001eb157740 Zea mays HOM05D004647 ORTHO05D005349 4.7e-84 315.1 204 74.5
Haze_07464 Corylus avellana HOM05D004647 ORTHO05D005349 2.6e-82 309.3 241 67.2
Peaxi162Scf00689g00228 Petunia axillaris HOM05D004647 ORTHO05D005349 1.4e-80 303.5 199 73.4
Carub.0007s0838 Capsella rubella HOM05D004647 ORTHO05D005349 2.7e-79 299.3 190 75.8
Aa31LG2G17760 Aethionema arabicum HOM05D004647 ORTHO05D005349 7.8e-79 297.7 239 64.9
CsaV3_1G001530 Cucumis sativus L. HOM05D004647 ORTHO05D005349 1.5e-74 283.5 170 80.6
Dinv02900 Davidia involucrata HOM05D004647 ORTHO05D005349 1.5e-74 283.5 176 77.3
Pp3c9_4960 Physcomitrium patens HOM05D004647 ORTHO05D005349 9.9e-74 280.8 230 61.3
Mapoly0033s0011 Marchantia polymorpha HOM05D004647 ORTHO05D005349 6.0e-71 271.6 230 57.0
SMO358G0755 Selaginella moellendorffii HOM05D004647 ORTHO05D005349 1.3e-68 263.8 224 56.2
THA.LOC104801749 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 1.3e-68 263.8 167 74.9
THA.LOC104815465 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 7.9e-63 244.6 149 79.2
Nn3g16872 Nelumbo nucifera HOM05D004647 ORTHO05D005349 8.7e-62 241.1 145 77.9
VMungo1215G1703 Vigna mungo HOM05D004647 ORTHO05D005349 2.8e-60 236.1 125 89.6
VMungo1215G3307 Vigna mungo HOM05D004647 ORTHO05D005349 2.6e-58 229.6 121 96.7
AagrBONN_evm.TU.Sc2ySwM_117.3294 Anthoceros agrestis HOM05D004647 ORTHO05D005349 4.6e-55 218.8 187 58.3
MELO3C026290.2 Cucumis melo HOM05D004647 ORTHO05D005349 7.9e-55 218.0 135 79.3
SEGI_17588 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 1.1e-53 214.2 141 73.8
SEGI_39775 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 1.1e-53 214.2 141 73.8
Sed0007118 Sechium edule HOM05D004647 ORTHO05D005349 4.8e-52 208.8 182 62.6
Cre07.g319900 Chlamydomonas reinhardtii HOM05D004647 ORTHO05D005349 3.4e-50 202.6 225 45.8
Zm00001eb359590 Zea mays HOM05D004647 ORTHO05D005349 1.0e-49 201.1 131 72.5
PSO384G3338 Papaver somniferum HOM05D004647 ORTHO05D005349 3.2e-48 196.1 169 60.9
QL02p101061 Quercus lobata HOM05D004647 ORTHO05D005349 1.2e-47 194.1 120 81.7
QL02p101105 Quercus lobata HOM05D004647 ORTHO05D005349 2.7e-47 193.0 120 80.8
CSS0025503 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 1.3e-46 190.7 127 73.2
Medtr5g009430 Medicago truncatula HOM05D004647 ORTHO05D005349 1.3e-46 190.7 120 76.7
CBR_g61059 Chara braunii HOM05D004647 ORTHO05D005349 1.8e-43 180.3 229 45.4
Ca_07701_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 3.2e-40 169.5 129 70.5
Glyma.19G045000 Glycine max HOM05D004647 ORTHO05D005349 6.1e-39 165.2 121 71.9
CAN.G110.1 Capsicum annuum HOM05D004647 ORTHO05D005349 1.3e-33 147.5 132 57.6
SEGI_00924 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 3.0e-30 136.3 101 67.3
CSS0039197 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 3.9e-30 136.0 111 64.0
PRCOL_00002933 Prasinoderma coloniale HOM05D004647 ORTHO05D005349 3.9e-30 136.0 178 44.4
Oeu005668.1 Olea europaea HOM05D004647 ORTHO05D005349 4.8e-28 129.0 85 69.4
Cfa024128 Carpinus fangiana HOM05D004647 ORTHO05D005349 8.2e-28 128.3 241 35.7
Ca_24957_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 8.2e-28 128.3 106 64.2
Cc00_g25260 Coffea canephora HOM05D004647 ORTHO05D005349 2.6e-26 123.2 81 75.3
Ca_22423_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 1.7e-25 120.6 100 69.0
SEGI_26695 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 5.0e-25 119.0 152 40.8
Cc00_g18100 Coffea canephora HOM05D004647 ORTHO05D005349 8.5e-25 118.2 89 66.3
PGSC0003DMG400042364 Solanum tuberosum HOM05D004647 ORTHO05D005349 3.6e-23 112.8 91 60.4
MCO01G631 Micromonas commoda HOM05D004647 ORTHO05D005349 2.2e-20 103.6 184 32.6
Potri.015G075400 Populus trichocarpa HOM05D004647 ORTHO05D005349 3.7e-20 102.8 70 75.7
CSS0048825 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 5.9e-18 95.5 70 68.6
Cc00_g33640 Coffea canephora HOM05D004647 ORTHO05D005349 1.9e-16 90.5 51 80.4
SEGI_09107 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 1.8e-14 84.0 71 60.6
MD14G1181100 Malus domestica HOM05D004647 ORTHO05D005349 1.7e-12 77.4 163 36.8
QL02p027014 Quercus lobata HOM05D004647 ORTHO05D005349 2.2e-09 67.0 36 83.3
QL02p024044 Quercus lobata HOM05D004647 ORTHO05D005349 2.7e-07 60.1 33 75.8


User provided reference genes

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