Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G076200 Phaseolus vulgaris HOM05D006009 ORTHO05D007389 0.0e+00 1251.1 678 100.0
Ca_13530_v3 Cicer arietinum L. HOM05D006009 ORTHO05D007389 4.2e-295 1017.7 691 81.6
Glyma.17G001700 Glycine max HOM05D006009 ORTHO05D007389 3.5e-294 1014.6 684 82.9
Glyma.07G272700 Glycine max HOM05D006009 ORTHO05D007389 2.5e-292 1008.4 682 82.6
TPR.G5949 Trifolium pratense HOM05D006009 ORTHO05D007389 3.3e-276 954.9 688 77.6
Psat4g001000 Pisum sativum HOM05D006009 ORTHO05D007389 4.5e-273 944.5 692 76.4
Lj4g0014586 Lotus japonicus HOM05D006009 ORTHO05D007389 5.5e-271 937.6 690 77.5
Medtr4g134640 Medicago truncatula HOM05D006009 ORTHO05D007389 1.0e-269 933.3 684 75.9
arahy.Tifrunner.gnm1.ann1.AUD1A6 Arachis hypogaea HOM05D006009 ORTHO05D007389 3.0e-269 931.8 694 74.2
arahy.Tifrunner.gnm1.ann1.WHZ4K1 Arachis hypogaea HOM05D006009 ORTHO05D007389 1.9e-268 929.1 694 74.2
Lalb_Chr12g0195841 Lupinus albus HOM05D006009 ORTHO05D007389 2.0e-260 902.5 686 74.1
Cfa004445 Carpinus fangiana HOM05D006009 ORTHO05D007389 7.0e-250 867.5 695 70.4
Thecc.06G017900 Theobroma cacao HOM05D006009 ORTHO05D007389 2.6e-249 865.5 700 69.4
QL02p103325 Quercus lobata HOM05D006009 ORTHO05D007389 3.5e-249 865.1 700 70.0
COL.COLO4_31132 Corchorus olitorius HOM05D006009 ORTHO05D007389 2.1e-246 855.9 697 69.2
Duzib160G0440 Durio zibethinus HOM05D006009 ORTHO05D007389 5.2e-245 851.3 700 68.4
Atru.chr6.240 Acer truncatum HOM05D006009 ORTHO05D007389 8.8e-245 850.5 704 69.7
Dinv29632 Davidia involucrata HOM05D006009 ORTHO05D007389 1.8e-242 842.8 690 69.4
CiPaw.05G001600 Carya illinoinensis HOM05D006009 ORTHO05D007389 9.1e-242 840.5 695 68.9
Manes.10G106700 Manihot esculenta HOM05D006009 ORTHO05D007389 1.1e-239 833.6 697 68.3
Haze_09985 Corylus avellana HOM05D006009 ORTHO05D007389 7.2e-239 830.9 782 62.3
CSS0016468 Camellia sinensis var. sinensis HOM05D006009 ORTHO05D007389 1.0e-237 827.0 690 68.1
RcHm_v2.0_Chr7g0219751 Rosa chinensis HOM05D006009 ORTHO05D007389 9.8e-236 820.5 696 67.5
Hma1.2p1_0052F.1_g030000 Hydrangea macrophylla HOM05D006009 ORTHO05D007389 4.1e-234 815.1 690 68.1
FvH4_5g27851 Fragaria vesca HOM05D006009 ORTHO05D007389 1.6e-233 813.1 692 66.9
MD15G1442900 Malus domestica HOM05D006009 ORTHO05D007389 7.7e-233 810.8 693 67.0
Actinidia00150 Actinidia chinensis HOM05D006009 ORTHO05D007389 1.7e-232 809.7 687 67.0
PGR142G3497 Punica granatum HOM05D006009 ORTHO05D007389 3.6e-230 802.0 695 65.5
TWI59G1011 Tripterygium wilfordii HOM05D006009 ORTHO05D007389 8.0e-230 800.8 667 67.0
Ciclev10000419m.g Citrus clementina HOM05D006009 ORTHO05D007389 3.0e-229 798.9 699 65.8
MD08G1248100 Malus domestica HOM05D006009 ORTHO05D007389 9.8e-228 793.9 698 66.0
Gohir.D06G150100 Gossypium hirsutum HOM05D006009 ORTHO05D007389 1.7e-227 793.1 700 65.0
CsaV3_5G037180 Cucumis sativus L. HOM05D006009 ORTHO05D007389 6.3e-227 791.2 703 64.3
Potri.003G000900 Populus trichocarpa HOM05D006009 ORTHO05D007389 6.3e-227 791.2 701 65.3
Sabra03G0000300 Salix brachista HOM05D006009 ORTHO05D007389 6.3e-227 791.2 701 65.6
ClCG11G000290 Citrullus lanatus HOM05D006009 ORTHO05D007389 3.5e-225 785.4 687 65.8
Gorai.010G175200 Gossypium raimondii HOM05D006009 ORTHO05D007389 1.0e-224 783.9 701 64.8
Rhsim11G0117900 Rhododendron simsii HOM05D006009 ORTHO05D007389 1.3e-224 783.5 722 63.3
Nitab4.5_0002261g0040 Nicotiana tabacum HOM05D006009 ORTHO05D007389 2.9e-224 782.3 700 65.0
MELO3C022930.2 Cucumis melo HOM05D006009 ORTHO05D007389 3.8e-224 781.9 701 64.3
Eucgr.I02796 Eucalyptus grandis HOM05D006009 ORTHO05D007389 2.5e-223 779.2 691 64.3
Solyc01g103040.4 Solanum lycopersicum HOM05D006009 ORTHO05D007389 2.5e-223 779.2 696 64.7
TAR628G0644 Trochodendron aralioides HOM05D006009 ORTHO05D007389 7.3e-223 777.7 691 65.4
Prupe.1G585300 Prunus persica HOM05D006009 ORTHO05D007389 6.1e-222 774.6 645 69.0
Lsat_1_v5_gn_5_104280 Lactuca sativa HOM05D006009 ORTHO05D007389 2.0e-220 769.6 690 63.8
ECA234G2369 Erigeron canadensis HOM05D006009 ORTHO05D007389 1.1e-218 763.8 695 62.6
Nitab4.5_0005110g0010 Nicotiana tabacum HOM05D006009 ORTHO05D007389 1.4e-218 763.5 718 62.5
Sopen01g045450 Solanum pennellii HOM05D006009 ORTHO05D007389 9.2e-218 760.8 696 63.6
HanXRQChr10g0301411 Helianthus annuus HOM05D006009 ORTHO05D007389 1.0e-216 757.3 690 62.5
CARHR258850 Cardamine hirsuta HOM05D006009 ORTHO05D007389 3.1e-213 745.7 694 61.0
Peaxi162Scf00011g01924 Petunia axillaris HOM05D006009 ORTHO05D007389 3.4e-212 742.3 699 62.5
AL8G23820 Arabidopsis lyrata HOM05D006009 ORTHO05D007389 2.9e-211 739.2 702 60.3
PSO017G1873 Papaver somniferum HOM05D006009 ORTHO05D007389 6.4e-211 738.0 694 61.8
Sp6g11340 Schrenkiella parvula HOM05D006009 ORTHO05D007389 6.4e-211 738.0 698 59.9
Thhalv10012797m.g Eutrema salsugineum HOM05D006009 ORTHO05D007389 1.9e-210 736.5 700 59.4
BcaB08g35360 Brassica carinata HOM05D006009 ORTHO05D007389 3.2e-210 735.7 696 60.5
Lj5C283T7 Lonicera japonica HOM05D006009 ORTHO05D007389 4.1e-210 735.3 707 62.2
Sc03g0005770 Simmondsia chinensis HOM05D006009 ORTHO05D007389 5.4e-210 734.9 696 61.9
THA.LOC104806651 Tarenaya hassleriana HOM05D006009 ORTHO05D007389 6.0e-209 731.5 700 60.0
AT5G49880 Arabidopsis thaliana HOM05D006009 ORTHO05D007389 2.3e-208 729.6 702 59.5
Cc02_g23590 Coffea canephora HOM05D006009 ORTHO05D007389 5.0e-208 728.4 702 60.5
BraSC37t46134Z Brassica rapa HOM05D006009 ORTHO05D007389 1.2e-206 723.8 695 60.4
Carub.0008s0974 Capsella rubella HOM05D006009 ORTHO05D007389 2.8e-206 722.6 700 58.9
SGA_v2.0_scaffold131G34411 Striga asiatica HOM05D006009 ORTHO05D007389 1.4e-205 720.3 705 59.1
FAN08G0569 Fragaria x ananassa HOM05D006009 ORTHO05D007389 1.8e-205 719.9 770 58.4
Aqoxy6G00035 Aquilegia oxysepala HOM05D006009 ORTHO05D007389 4.4e-204 715.3 674 60.5
vmacro01680 Vaccinium macrocarpon HOM05D006009 ORTHO05D007389 1.3e-203 713.8 776 55.8
MBI03_g05191_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 2.9e-203 712.6 698 60.2
A10p08680 Brassica napus HOM05D006009 ORTHO05D007389 4.9e-203 711.8 695 59.7
PSO170G2218 Papaver somniferum HOM05D006009 ORTHO05D007389 1.1e-202 710.7 693 60.0
FAN04G2183 Fragaria x ananassa HOM05D006009 ORTHO05D007389 2.7e-201 706.1 659 64.2
DCAR_001725 Daucus carota HOM05D006009 ORTHO05D007389 6.6e-200 701.4 690 59.1
BcaC04g20834 Brassica carinata HOM05D006009 ORTHO05D007389 2.8e-198 696.0 693 58.3
Migut.B00722 Erythranthe guttata HOM05D006009 ORTHO05D007389 8.1e-198 694.5 706 58.5
MSTRG.16468 Avicennia marina HOM05D006009 ORTHO05D007389 2.3e-197 693.0 672 60.7
C09p38660 Brassica napus HOM05D006009 ORTHO05D007389 3.4e-196 689.1 695 58.3
BolC9t56722H Brassica oleracea HOM05D006009 ORTHO05D007389 3.4e-196 689.1 695 58.3
Ah.03g136790 Amaranthus hybridus HOM05D006009 ORTHO05D007389 5.8e-196 688.3 680 59.1
Potri.004G228900 Populus trichocarpa HOM05D006009 ORTHO05D007389 2.2e-195 686.4 699 59.8
Nn5g27199 Nelumbo nucifera HOM05D006009 ORTHO05D007389 9.2e-194 681.0 694 60.4
Gohir.A06G144400 Gossypium hirsutum HOM05D006009 ORTHO05D007389 1.3e-187 660.6 641 61.9
Aa31sc62G20 Aethionema arabicum HOM05D006009 ORTHO05D007389 4.9e-187 658.7 692 55.9
AUR62042641 Chenopodium quinoa HOM05D006009 ORTHO05D007389 1.3e-182 644.0 714 55.2
unitig_8.g4550 Utricularia gibba HOM05D006009 ORTHO05D007389 2.7e-177 626.3 631 56.7
EL10Ac6g13997 Beta vulgaris HOM05D006009 ORTHO05D007389 2.1e-174 616.7 744 51.9
AUR62032470 Chenopodium quinoa HOM05D006009 ORTHO05D007389 1.2e-169 600.9 694 53.3
ATR1089G153 Amborella trichopoda HOM05D006009 ORTHO05D007389 1.0e-168 597.8 697 52.9
CANSAT01G0444 Cannabis sativa HOM05D006009 ORTHO05D007389 9.0e-165 584.7 595 59.3
Os01g0877300 Oryza sativa ssp. japonica HOM05D006009 ORTHO05D007389 3.2e-162 576.2 696 50.4
Oeu043610.2 Olea europaea HOM05D006009 ORTHO05D007389 2.5e-159 566.6 640 54.7
HPP92_003614 Vanilla planifolia HOM05D006009 ORTHO05D007389 2.3e-152 543.5 692 49.9
CDE05G2940 Ceratophyllum demersum HOM05D006009 ORTHO05D007389 9.7e-135 485.0 550 53.5
Manes.10G107000 Manihot esculenta HOM05D006009 ORTHO05D007389 6.3e-134 482.3 425 65.6
FAN18G4220 Fragaria x ananassa HOM05D006009 ORTHO05D007389 8.2e-134 481.9 543 55.4
Sed0013076 Sechium edule HOM05D006009 ORTHO05D007389 7.7e-132 475.3 562 52.8
GSVIVG01023148001 Vitis vinifera HOM05D006009 ORTHO05D007389 1.2e-121 441.4 421 62.9
Cpa.g.sc173.18 Carica papaya HOM05D006009 ORTHO05D007389 2.0e-119 434.1 332 73.5
CAN.G855.52 Capsicum annuum HOM05D006009 ORTHO05D007389 8.3e-110 402.1 336 68.2
CAN.G855.51 Capsicum annuum HOM05D006009 ORTHO05D007389 1.1e-101 375.2 370 57.8
GSVIVG01023147001 Vitis vinifera HOM05D006009 ORTHO05D007389 4.1e-101 373.2 277 72.9
Oeu028479.1 Olea europaea HOM05D006009 ORTHO05D007389 1.3e-91 341.7 252 73.8
Sabra01G0173900 Salix brachista HOM05D006009 ORTHO05D007389 4.1e-85 320.1 503 47.1
Zm00001eb145920 Zea mays HOM05D006009 ORTHO05D007389 7.8e-84 315.8 453 46.8
Mapoly0034s0031 Marchantia polymorpha HOM05D006009 ORTHO05D007389 4.6e-76 290.0 688 31.5
Pp3c17_20400 Physcomitrium patens HOM05D006009 ORTHO05D007389 5.1e-75 286.6 659 34.4
Cpa.g.sc173.20 Carica papaya HOM05D006009 ORTHO05D007389 3.3e-74 283.9 374 50.5
AagrBONN_evm.TU.Sc2ySwM_228.1218 Anthoceros agrestis HOM05D006009 ORTHO05D007389 6.2e-73 279.6 674 31.5
Oeu028480.1 Olea europaea HOM05D006009 ORTHO05D007389 2.2e-70 271.2 268 59.0
ECA234G2367 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.5e-66 258.5 288 56.9
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 1.5e-66 258.5 656 35.4
CBR_g38734 Chara braunii HOM05D006009 ORTHO05D007389 1.3e-54 218.8 683 29.4
SMO343G0014 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 6.4e-54 216.5 692 29.0
Eucgr.D02407 Eucalyptus grandis HOM05D006009 ORTHO05D007389 5.3e-32 143.7 131 63.4
Psat6g226760 Pisum sativum HOM05D003335 ORTHO05D003853 7.7e-31 139.8 113 69.0
Glyma.14G105500 Glycine max HOM05D006009 ORTHO05D007389 1.2e-23 115.9 70 85.7
Hund15371 Selenicereus undatus HOM05D006009 ORTHO05D007389 2.6e-23 114.8 173 49.1
SEGI_19376 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 5.9e-23 113.6 144 50.7
SEGI_26370 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 3.0e-19 101.3 124 45.2
SEGI_01187 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 3.1e-16 91.3 137 45.3
SEGI_34522 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 7.0e-16 90.1 57 71.9
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 5.9e-15 87.0 55 83.6
Oeu028483.1 Olea europaea HOM05D006009 ORTHO05D007389 2.9e-14 84.7 98 52.0
MBI06_g11892_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D004199 1.5e-13 82.4 100 52.0
QL08p014094 Quercus lobata HOM05D006009 ORTHO05D007389 1.2e-12 79.3 105 45.7
MBI18_g20174_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 2.1e-12 78.6 68 60.3
Zm00001eb351220 Zea mays HOM05D006009 ORTHO05D007389 3.3e-10 71.2 55 67.3
PRCOL_00003389 Prasinoderma coloniale HOM05D006009 ORTHO05D007389 2.8e-09 68.2 470 21.3
MD15G1442500 Malus domestica HOM05D006009 ORTHO05D007389 1.6e-07 62.4 43 62.8
GSVIVG01023072001 Vitis vinifera HOM05D001300 ORTHO05D014438 2.7e-07 61.6 72 54.2
RhsimUnG0219700 Rhododendron simsii HOM05D006009 ORTHO05D007389 1.0e-06 59.7 41 75.6
MCO13G251 Micromonas commoda HOM05D006009 ORTHO05D007389 6.5e-06 57.0 91 38.5


User provided reference genes

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