Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G325100 Phaseolus vulgaris HOM05D004432 ORTHO05D005427 1.8e-204 715.7 369 100.0
TPR.G12851 Trifolium pratense HOM05D004432 ORTHO05D005427 1.4e-156 556.6 376 79.3
Glyma.08G049300 Glycine max HOM05D004432 ORTHO05D005427 4.6e-155 551.6 358 82.1
VMungo0251G3730 Vigna mungo HOM05D004432 ORTHO05D005427 2.3e-154 549.3 373 81.2
Glyma.05G241800 Glycine max HOM05D004432 ORTHO05D005427 8.7e-154 547.4 372 80.4
Thecc.02G004200 Theobroma cacao HOM05D004432 ORTHO05D005427 4.8e-144 515.0 376 75.3
Lalb_Chr05g0222011 Lupinus albus HOM05D004432 ORTHO05D005427 6.4e-141 504.6 374 73.5
arahy.Tifrunner.gnm1.ann1.AGE02H Arachis hypogaea HOM05D004432 ORTHO05D005427 3.2e-140 502.3 371 73.0
COL.COLO4_18029 Corchorus olitorius HOM05D004432 ORTHO05D003521 7.1e-140 501.1 366 73.8
arahy.Tifrunner.gnm1.ann1.GLQ3B3 Arachis hypogaea HOM05D004432 ORTHO05D005427 1.6e-139 500.0 371 72.8
MD05G1247000 Malus domestica HOM05D004432 ORTHO05D005427 2.8e-136 489.2 374 72.2
MD10G1227600 Malus domestica HOM05D004432 ORTHO05D005427 6.2e-136 488.0 374 71.1
Medtr8g106220 Medicago truncatula HOM05D004432 ORTHO05D005427 1.0e-133 480.7 353 73.7
PGSC0003DMG401017733 Solanum tuberosum HOM05D004432 ORTHO05D005427 1.0e-133 480.7 374 69.8
Gohir.D12G047900 Gossypium hirsutum HOM05D004432 ORTHO05D005427 6.5e-133 478.0 374 69.8
Atru.chr10.352 Acer truncatum HOM05D004432 ORTHO05D005427 4.2e-132 475.3 375 70.1
RcHm_v2.0_Chr5g0021051 Rosa chinensis HOM05D004432 ORTHO05D005427 9.3e-132 474.2 376 70.5
Oeu056059.4 Olea europaea HOM05D004432 ORTHO05D005427 1.2e-131 473.8 413 64.9
Ca_17239_v3 Cicer arietinum L. HOM05D004432 ORTHO05D005427 2.7e-131 472.6 359 72.7
Psat7g005440 Pisum sativum HOM05D004432 ORTHO05D005427 2.7e-131 472.6 353 72.8
Gohir.A12G049500 Gossypium hirsutum HOM05D004432 ORTHO05D005427 6.0e-131 471.5 374 69.3
Sabra03G0044900 Salix brachista HOM05D004432 ORTHO05D005427 6.0e-131 471.5 379 69.7
FvH4_3g12940 Fragaria vesca HOM05D004432 ORTHO05D005427 7.9e-131 471.1 376 71.0
FAN25G3492 Fragaria x ananassa HOM05D004432 ORTHO05D005427 1.3e-130 470.3 376 70.7
Duzib248G0466 Durio zibethinus HOM05D004432 ORTHO05D005427 2.3e-130 469.5 398 66.3
FAN16G2829 Fragaria x ananassa HOM05D004432 ORTHO05D005427 2.3e-130 469.5 376 70.7
CiPaw.10G104800 Carya illinoinensis HOM05D004432 ORTHO05D005427 4.3e-129 465.3 352 70.5
Ciclev10015448m.g Citrus clementina HOM05D004432 ORTHO05D005427 4.3e-129 465.3 354 70.6
FAN21G3105 Fragaria x ananassa HOM05D004432 ORTHO05D005427 5.7e-129 464.9 376 70.7
Solyc02g081620.3 Solanum lycopersicum HOM05D004432 ORTHO05D005427 2.8e-128 462.6 373 68.1
Sed0004537 Sechium edule HOM05D004432 ORTHO05D005427 4.8e-128 461.8 375 68.8
CsaV3_6G052770 Cucumis sativus L. HOM05D004432 ORTHO05D005427 1.8e-127 459.9 376 68.9
Lj4g0008002 Lotus japonicus HOM05D004432 ORTHO05D005427 5.0e-125 451.8 357 71.4
Cc09_g05240 Coffea canephora HOM05D004432 ORTHO05D005427 1.1e-124 450.7 356 69.1
Peaxi162Scf00048g01413 Petunia axillaris HOM05D004432 ORTHO05D005427 1.9e-124 449.9 373 67.3
Duzib132G0752 Durio zibethinus HOM05D004432 ORTHO05D005427 9.4e-124 447.6 350 69.7
ClCG01G025530 Citrullus lanatus HOM05D004432 ORTHO05D005427 1.6e-123 446.8 424 62.3
CANSAT35G1493 Cannabis sativa HOM05D004432 ORTHO05D005427 7.9e-123 444.5 375 66.4
Lalb_Chr09g0330711 Lupinus albus HOM05D004432 ORTHO05D005427 1.0e-122 444.1 351 70.4
TAR624G0396 Trochodendron aralioides HOM05D004432 ORTHO05D005427 1.4e-122 443.7 378 64.8
Hma1.2p1_0088F.1_g045180 Hydrangea macrophylla HOM05D004432 ORTHO05D005427 2.3e-122 443.0 376 67.8
Peaxi162Scf00198g01525 Petunia axillaris HOM05D004432 ORTHO05D005427 3.9e-122 442.2 378 67.2
SalBow8G1652 Salvia bowleyana HOM05D004432 ORTHO05D005427 3.9e-122 442.2 377 65.3
Dinv31191 Davidia involucrata HOM05D004432 ORTHO05D005427 1.1e-121 440.7 380 65.8
Manes.03G075400 Manihot esculenta HOM05D004432 ORTHO05D005427 1.1e-121 440.7 373 66.8
Nitab4.5_0010401g0010 Nicotiana tabacum HOM05D004432 ORTHO05D005427 1.1e-121 440.7 348 70.1
Nitab4.5_0006794g0040 Nicotiana tabacum HOM05D004432 ORTHO05D005427 2.0e-121 439.9 348 70.1
PSO541G2602 Papaver somniferum HOM05D004432 ORTHO05D005427 1.3e-120 437.2 385 64.9
CAN.G809.71 Capsicum annuum HOM05D004432 ORTHO05D005427 1.7e-120 436.8 383 64.5
Atru.chr8.662 Acer truncatum HOM05D004432 ORTHO05D005427 2.2e-120 436.4 353 68.6
Prupe.4G117400 Prunus persica HOM05D004432 ORTHO05D005427 2.2e-120 436.4 372 67.7
Gorai.008G050900 Gossypium raimondii HOM05D004432 ORTHO05D005427 2.8e-120 436.0 350 67.7
GSVIVG01012145001 Vitis vinifera HOM05D004432 ORTHO05D005427 3.7e-120 435.6 376 65.4
Lj1A1149G74 Lonicera japonica HOM05D004432 ORTHO05D005427 8.2e-120 434.5 423 62.2
FAN11G2748 Fragaria x ananassa HOM05D004432 ORTHO05D005427 1.8e-119 433.3 354 69.2
Oeu018409.2 Olea europaea HOM05D004432 ORTHO05D005427 1.8e-119 433.3 426 60.8
TWI63G0296 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 5.3e-119 431.8 378 64.0
GSVIVG01015880001 Vitis vinifera HOM05D004432 ORTHO05D005427 5.3e-119 431.8 373 64.3
ECA232G3357 Erigeron canadensis HOM05D004432 ORTHO05D005427 1.2e-118 430.6 377 65.8
Sopen02g026240 Solanum pennellii HOM05D004432 ORTHO05D005427 1.2e-118 430.6 351 67.2
CSS0030674 Camellia sinensis var. sinensis HOM05D004432 ORTHO05D005427 3.4e-118 429.1 375 65.3
MELO3C007033.2 Cucumis melo HOM05D004432 ORTHO05D005427 3.4e-118 429.1 354 68.1
TWI15G0381 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 3.4e-118 429.1 373 63.3
Actinidia33704 Actinidia chinensis HOM05D004432 ORTHO05D005427 1.0e-117 427.6 352 67.0
unitig_748.g7489 Utricularia gibba HOM05D004432 ORTHO05D005427 3.8e-117 425.6 372 64.5
TWI34G0639 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 1.4e-116 423.7 386 62.4
CSS0046356 Camellia sinensis var. sinensis HOM05D004432 ORTHO05D005427 1.9e-116 423.3 396 61.6
Migut.M02008 Erythranthe guttata HOM05D004432 ORTHO05D005427 3.6e-115 419.1 380 62.6
MBI18_g00544_MAGBIO Magnolia biondii HOM05D004432 ORTHO05D005427 1.0e-114 417.5 377 63.1
Potri.001G160700 Populus trichocarpa HOM05D004432 ORTHO05D005427 1.8e-114 416.8 351 66.1
Cpa.g.sc30.114 Carica papaya HOM05D004432 ORTHO05D005427 2.3e-114 416.4 350 65.1
PGR042G3514 Punica granatum HOM05D004432 ORTHO05D005427 1.5e-113 413.7 387 62.8
Carub.0001s2938 Capsella rubella HOM05D004432 ORTHO05D005427 2.0e-113 413.3 379 62.3
TWI15G1036 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 2.6e-113 412.9 366 64.2
Nn7g38330 Nelumbo nucifera HOM05D004432 ORTHO05D005427 7.4e-113 411.4 354 64.4
Sopen02g010370 Solanum pennellii HOM05D004432 ORTHO05D005427 1.3e-112 410.6 375 64.5
Eucgr.E04313 Eucalyptus grandis HOM05D004432 ORTHO05D005427 2.2e-112 409.8 372 64.2
HanXRQChr09g0257831 Helianthus annuus HOM05D004432 ORTHO05D005427 2.2e-112 409.8 375 64.5
PSO675G3183 Papaver somniferum HOM05D004432 ORTHO05D005427 1.8e-111 406.8 358 64.2
Solyc02g032120.3 Solanum lycopersicum HOM05D004432 ORTHO05D005427 1.8e-111 406.8 375 64.3
AT1G30970 Arabidopsis thaliana HOM05D004432 ORTHO05D005427 5.3e-111 405.2 387 61.2
SGA_v2.0_scaffold298G47706 Striga asiatica HOM05D004432 ORTHO05D005427 7.0e-111 404.8 381 61.2
Sabra01G0131600 Salix brachista HOM05D004432 ORTHO05D005427 1.2e-110 404.1 378 62.4
SGA_v2.0_scaffold175G39329 Striga asiatica HOM05D004432 ORTHO05D005427 1.5e-110 403.7 441 56.9
Lalb_Chr10g0095541 Lupinus albus HOM05D004432 ORTHO05D005427 2.2e-109 399.8 374 63.6
DCAR_003760 Daucus carota HOM05D004432 ORTHO05D005427 1.9e-108 396.7 357 64.4
AL1G45380 Arabidopsis lyrata HOM05D004432 ORTHO05D005427 1.8e-106 390.2 358 61.5
Dinv05655 Davidia involucrata HOM05D004432 ORTHO05D005427 2.3e-106 389.8 378 61.6
Aqoxy1G01396 Aquilegia oxysepala HOM05D004432 ORTHO05D005427 8.8e-106 387.9 353 61.5
Lsat_1_v5_gn_8_106840 Lactuca sativa HOM05D004432 ORTHO05D005427 2.6e-105 386.3 370 62.2
BcaB07g32757 Brassica carinata HOM05D004432 ORTHO05D005427 5.0e-101 372.1 377 58.9
Actinidia22430 Actinidia chinensis HOM05D004432 ORTHO05D005427 8.5e-101 371.3 353 60.1
Aa31LG6G12370 Aethionema arabicum HOM05D004432 ORTHO05D005427 3.6e-99 365.9 357 59.7
AUR62017849 Chenopodium quinoa HOM05D004432 ORTHO05D005427 1.2e-97 360.9 413 54.5
BcaB04g18194 Brassica carinata HOM05D004432 ORTHO05D005427 1.5e-97 360.5 375 56.8
MSTRG.16369 Avicennia marina HOM05D004432 ORTHO05D005427 2.8e-96 356.3 357 58.5
THA.LOC104798567 Tarenaya hassleriana HOM05D004432 ORTHO05D005427 3.7e-96 355.9 355 59.7
BraA09t39051Z Brassica rapa HOM05D004432 ORTHO05D005427 2.4e-95 353.2 376 57.4
BcaC07g37789 Brassica carinata HOM05D004432 ORTHO05D005427 7.0e-95 351.7 374 57.5
Thhalv10008022m.g Eutrema salsugineum HOM05D004432 ORTHO05D005427 2.0e-94 350.1 375 56.0
EL10Ac6g15345 Beta vulgaris HOM05D004432 ORTHO05D005427 4.5e-94 349.0 384 56.2
Sp1g26830 Schrenkiella parvula HOM05D004432 ORTHO05D005427 5.9e-94 348.6 354 57.1
Sc16g0004480 Simmondsia chinensis HOM05D004432 ORTHO05D005427 1.5e-92 344.0 358 56.7
Cfa001128 Carpinus fangiana HOM05D004432 ORTHO05D005427 3.2e-92 342.8 326 61.0
AUR62003535 Chenopodium quinoa HOM05D004432 ORTHO05D005427 2.1e-91 340.1 352 57.7
Os09g0560900 Oryza sativa ssp. japonica HOM05D004432 ORTHO05D005427 6.1e-91 338.6 378 56.9
ATR0568G227 Amborella trichopoda HOM05D004432 ORTHO05D005427 1.4e-90 337.4 386 54.1
HPP92_006155 Vanilla planifolia HOM05D004432 ORTHO05D005427 1.4e-90 337.4 358 55.9
BcaC05g27130 Brassica carinata HOM05D004432 ORTHO05D005427 3.0e-90 336.3 372 55.1
C05p30150 Brassica napus HOM05D004432 ORTHO05D005427 3.0e-90 336.3 372 55.1
BolC5t31752H Brassica oleracea HOM05D004432 ORTHO05D005427 5.2e-90 335.5 373 55.8
HPP92_024334 Vanilla planifolia HOM05D004432 ORTHO05D005427 5.2e-90 335.5 350 58.3
A08p10850 Brassica napus HOM05D004432 ORTHO05D005427 4.4e-89 332.4 354 56.8
Hund04373 Selenicereus undatus HOM05D004432 ORTHO05D005427 4.4e-89 332.4 501 46.1
CDE01G0579 Ceratophyllum demersum HOM05D007061 ORTHO05D009017 1.8e-87 327.0 324 60.2
QL11p012272 Quercus lobata HOM05D004432 ORTHO05D005427 2.4e-87 326.6 282 62.4
Potri.003G074200 Populus trichocarpa HOM05D004432 ORTHO05D005427 9.1e-87 324.7 275 67.3
SEGI_00495 Sequoiadendron giganteum HOM05D004432 ORTHO05D005427 3.5e-86 322.8 395 52.9
BolC8t48181H Brassica oleracea HOM05D004432 ORTHO05D005427 7.7e-86 321.6 353 56.1
BraA08t33081Z Brassica rapa HOM05D004432 ORTHO05D005427 8.6e-85 318.2 354 55.9
Ah.03g147620 Amaranthus hybridus HOM05D004432 ORTHO05D005427 2.5e-84 316.6 344 57.6
A09p35240 Brassica napus HOM05D004432 ORTHO05D005427 9.5e-84 314.7 355 54.9
vmacro03556 Vaccinium macrocarpon HOM05D004432 ORTHO05D005427 2.0e-81 307.0 481 45.5
TWI32G0924 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 2.2e-80 303.5 309 57.3
Mapoly0070s0095 Marchantia polymorpha HOM05D004432 ORTHO05D005427 4.5e-78 295.8 398 49.0
TAR629G1033 Trochodendron aralioides HOM05D004432 ORTHO05D005427 2.1e-75 287.0 289 56.7
AagrBONN_evm.TU.Sc2ySwM_344.4234 Anthoceros agrestis HOM05D004432 ORTHO05D005427 1.0e-74 284.6 410 45.4
Pp3c22_1400 Physcomitrium patens HOM05D004432 ORTHO05D005427 1.0e-69 268.1 403 46.2
CiPaw.09G137500 Carya illinoinensis HOM05D004432 ORTHO05D005427 2.9e-64 250.0 164 76.8
Haze_05275 Corylus avellana HOM05D004432 ORTHO05D005427 1.4e-63 247.7 272 55.9
SMO239G0124 Selaginella moellendorffii HOM05D004432 ORTHO05D005427 3.2e-63 246.5 378 45.0
Dinv23013 Davidia involucrata HOM05D004432 ORTHO05D005427 7.3e-60 235.3 249 58.2
Rhsim13G0133800 Rhododendron simsii HOM05D004432 ORTHO05D005427 1.1e-55 221.5 305 51.1
RhsimUnG0176800 Rhododendron simsii HOM05D004432 ORTHO05D005427 1.1e-55 221.5 305 51.1
CiPaw.09G137600 Carya illinoinensis HOM05D004432 ORTHO05D005427 5.4e-55 219.2 185 68.6
Zm00001eb104750 Zea mays HOM05D004432 ORTHO05D005427 3.0e-53 213.4 318 47.5
SEGI_03989 Sequoiadendron giganteum HOM05D004432 ORTHO05D005427 5.6e-52 209.1 328 45.1
Haze_05262 Corylus avellana HOM05D004432 ORTHO05D005427 1.8e-50 204.1 98 95.9
Rhsim13G0133700 Rhododendron simsii HOM05D004432 ORTHO05D005427 2.4e-47 193.7 99 91.9
RhsimUnG0176700 Rhododendron simsii HOM05D004432 ORTHO05D005427 2.4e-47 193.7 99 91.9
CBR_g1074 Chara braunii HOM05D004432 ORTHO05D005427 4.3e-44 183.0 146 62.3
SHI20754 Sapria himalayana HOM05D000030 ORTHO05D000009 2.8e-43 180.3 684 29.1
Dinv23014 Davidia involucrata HOM05D004432 ORTHO05D005427 1.5e-41 174.5 93 90.3
CARHR030510 Cardamine hirsuta HOM05D004432 ORTHO05D005427 8.7e-37 158.7 213 51.2
Nitab4.5_0004903g0050 Nicotiana tabacum HOM05D004432 ORTHO05D005427 4.3e-36 156.4 226 47.3
Atru.chr10.360 Acer truncatum HOM05D004432 ORTHO05D005427 2.0e-33 147.5 220 46.8
SEGI_09071 Sequoiadendron giganteum HOM05D004432 ORTHO05D005427 5.8e-33 146.0 92 80.4
Sopen12g027920 Solanum pennellii HOM05D004432 ORTHO05D005427 8.1e-27 125.6 71 80.3
Pp3c19_17160 Physcomitrium patens HOM05D004432 ORTHO05D005427 2.9e-24 117.1 145 51.7
Cre06.g305200 Chlamydomonas reinhardtii HOM05D004432 ORTHO05D005427 1.4e-23 114.8 111 50.5
MCO08G042 Micromonas commoda HOM05D004432 ORTHO05D005427 2.1e-22 110.9 182 41.2
Cfa025961 Carpinus fangiana HOM05D004432 ORTHO05D005427 2.7e-22 110.5 83 56.6
GSVIVG01015874001 Vitis vinifera HOM05D004432 ORTHO05D005427 1.0e-21 108.6 65 78.5
Aqoxy1G01395 Aquilegia oxysepala HOM05D004432 ORTHO05D005427 2.3e-21 107.5 361 30.5
CAN.G958.2 Capsicum annuum HOM05D004432 ORTHO05D005427 2.1e-19 100.9 76 64.5
Psat6g089360 Pisum sativum HOM05D004432 ORTHO05D005427 1.4e-18 98.2 106 59.4
Dinv01000 Davidia involucrata HOM05D004432 ORTHO05D005427 1.5e-17 94.7 179 40.2
Lj1g0003853 Lotus japonicus HOM05D004432 ORTHO05D005427 8.4e-16 89.0 60 71.7
Psat7g229080 Pisum sativum HOM05D004432 ORTHO05D005427 6.5e-08 62.8 74 47.3


User provided reference genes

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