Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G289800 Phaseolus vulgaris HOM05D005411 ORTHO05D006463 2.1e-69 265.8 151 100.0
VMungo0251G3187 Vigna mungo HOM05D005411 ORTHO05D006463 3.1e-49 198.7 110 91.8
Ca_17530_v3 Cicer arietinum L. HOM05D005411 ORTHO05D006463 7.6e-48 194.1 132 81.1
Glyma.05G208200 Glycine max HOM05D005411 ORTHO05D006463 3.5e-45 185.3 107 90.7
Lalb_Chr09g0332851 Lupinus albus HOM05D005411 ORTHO05D006463 6.0e-45 184.5 122 81.1
Medtr8g098255 Medicago truncatula HOM05D005411 ORTHO05D006463 2.3e-44 182.6 109 85.3
Lj4g0004308 Lotus japonicus HOM05D005411 ORTHO05D006463 3.9e-44 181.8 133 74.4
CiPaw.11G134900 Carya illinoinensis HOM05D005411 ORTHO05D006463 4.3e-43 178.3 134 71.6
Psat7g033000 Pisum sativum HOM05D005411 ORTHO05D006463 7.4e-43 177.6 109 82.6
MD06G1084200 Malus domestica HOM05D005411 ORTHO05D006463 1.6e-42 176.4 112 82.1
Manes.02G019300 Manihot esculenta HOM05D005411 ORTHO05D006463 1.6e-42 176.4 131 71.8
TWI60G1258 Tripterygium wilfordii HOM05D005411 ORTHO05D006463 1.6e-42 176.4 130 72.3
TPR.G12871 Trifolium pratense HOM05D005411 ORTHO05D006463 2.1e-42 176.0 119 77.3
Potri.001G103800 Populus trichocarpa HOM05D005411 ORTHO05D006463 1.4e-41 173.3 112 78.6
RcHm_v2.0_Chr7g0197541 Rosa chinensis HOM05D005411 ORTHO05D006463 1.4e-41 173.3 152 63.8
FvH4_5g02510 Fragaria vesca HOM05D005411 ORTHO05D006463 2.4e-41 172.6 112 79.5
Eucgr.H02261 Eucalyptus grandis HOM05D005411 ORTHO05D006463 4.1e-41 171.8 112 78.6
MD14G1105400 Malus domestica HOM05D005411 ORTHO05D006463 6.9e-41 171.0 112 80.4
Eucgr.L02732 Eucalyptus grandis HOM05D005411 ORTHO05D006463 1.2e-40 170.2 112 77.7
ClCG07G008090 Citrullus lanatus HOM05D005411 ORTHO05D006463 1.5e-40 169.9 111 79.3
QL12p032900 Quercus lobata HOM05D005411 ORTHO05D006463 1.5e-40 169.9 111 77.5
GSVIVG01019751001 Vitis vinifera HOM05D005411 ORTHO05D006463 2.6e-40 169.1 133 68.4
Actinidia02004 Actinidia chinensis HOM05D005411 ORTHO05D006463 5.9e-40 167.9 119 73.1
CSS0034062 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 7.6e-40 167.5 119 72.3
Cc08_g14780 Coffea canephora HOM05D005411 ORTHO05D006463 7.6e-40 167.5 115 73.0
Prupe.5G100600 Prunus persica HOM05D005411 ORTHO05D006463 1.0e-39 167.2 138 65.9
PGR042G1580 Punica granatum HOM05D005411 ORTHO05D006463 1.0e-39 167.2 133 64.7
Gohir.A03G016600 Gossypium hirsutum HOM05D005411 ORTHO05D006463 2.9e-39 165.6 112 75.0
Ciclev10022634m.g Citrus clementina HOM05D005411 ORTHO05D006463 3.8e-39 165.2 129 65.9
Nitab4.5_0013184g0010 Nicotiana tabacum HOM05D005411 ORTHO05D006463 5.0e-39 164.9 112 74.1
Peaxi162Scf00119g00941 Petunia axillaris HOM05D005411 ORTHO05D006463 5.0e-39 164.9 112 74.1
Sed0017646 Sechium edule HOM05D005411 ORTHO05D006463 8.5e-39 164.1 112 75.0
Gorai.003G158500 Gossypium raimondii HOM05D005411 ORTHO05D006463 1.1e-38 163.7 112 74.1
Hma1.2p1_0377F.1_g139300 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 1.1e-38 163.7 112 75.0
Nitab4.5_0001615g0100 Nicotiana tabacum HOM05D005411 ORTHO05D006463 1.1e-38 163.7 112 72.3
Dinv38942 Davidia involucrata HOM05D005411 ORTHO05D006463 1.9e-38 162.9 162 57.4
CANSAT78G0141 Cannabis sativa HOM05D005411 ORTHO05D006463 2.5e-38 162.5 125 68.8
CAN.G774.50 Capsicum annuum HOM05D005411 ORTHO05D006463 2.5e-38 162.5 130 66.2
PSO782G3895 Papaver somniferum HOM05D005411 ORTHO05D006463 2.5e-38 162.5 112 71.4
Solyc08g081130.4 Solanum lycopersicum HOM05D005411 ORTHO05D006463 2.5e-38 162.5 130 67.7
Sopen08g029430 Solanum pennellii HOM05D005411 ORTHO05D006463 2.5e-38 162.5 130 67.7
PGSC0003DMG403012339 Solanum tuberosum HOM05D005411 ORTHO05D006463 2.5e-38 162.5 130 67.7
PSO478G4730 Papaver somniferum HOM05D005411 ORTHO05D006463 3.2e-38 162.2 112 71.4
Actinidia14564 Actinidia chinensis HOM05D005411 ORTHO05D006463 4.2e-38 161.8 119 71.4
CsaV3_4G005950 Cucumis sativus L. HOM05D005411 ORTHO05D006463 4.2e-38 161.8 112 74.1
Dinv38939 Davidia involucrata HOM05D005411 ORTHO05D006463 4.2e-38 161.8 112 73.2
Lsat_1_v5_gn_6_6580 Lactuca sativa HOM05D005411 ORTHO05D006463 7.2e-38 161.0 119 70.6
Migut.A00759 Erythranthe guttata HOM05D005411 ORTHO05D006463 2.1e-37 159.5 118 66.1
Oeu011043.2 Olea europaea HOM05D005411 ORTHO05D006463 2.7e-37 159.1 142 58.5
MBI18_g42863_MAGBIO Magnolia biondii HOM05D005411 ORTHO05D006463 6.1e-37 157.9 106 73.6
SalBow4G3209 Salvia bowleyana HOM05D005411 ORTHO05D006463 6.1e-37 157.9 117 65.8
CiPaw.12G092800 Carya illinoinensis HOM05D005411 ORTHO05D006463 1.0e-36 157.1 136 63.2
arahy.Tifrunner.gnm1.ann1.FJ1DNZ Arachis hypogaea HOM05D005411 ORTHO05D006463 1.3e-36 156.8 112 76.8
arahy.Tifrunner.gnm1.ann1.P2DUDW Arachis hypogaea HOM05D005411 ORTHO05D006463 1.3e-36 156.8 112 76.8
ECA233G5385 Erigeron canadensis HOM05D005411 ORTHO05D006463 2.3e-36 156.0 111 72.1
HanXRQChr13g0394241 Helianthus annuus HOM05D005411 ORTHO05D006463 2.3e-36 156.0 128 64.1
vmacro11335 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 3.3e-35 152.1 137 62.8
vmacro22820 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 3.3e-35 152.1 137 62.8
THA.LOC104814574 Tarenaya hassleriana HOM05D005411 ORTHO05D006463 4.3e-35 151.8 111 68.5
Nn1g01526 Nelumbo nucifera HOM05D005411 ORTHO05D006463 5.7e-35 151.4 123 63.4
unitig_46.g18551 Utricularia gibba HOM05D005411 ORTHO05D006463 5.7e-35 151.4 117 65.0
Thhalv10026496m.g Eutrema salsugineum HOM05D005411 ORTHO05D006463 9.7e-35 150.6 118 66.1
vmacro13959 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 9.7e-35 150.6 139 60.4
AL7G30140 Arabidopsis lyrata HOM05D005411 ORTHO05D006463 2.2e-34 149.4 112 68.8
ATR0680G335 Amborella trichopoda HOM05D005411 ORTHO05D006463 2.8e-34 149.1 123 62.6
BcaC09g51012 Brassica carinata HOM05D005411 ORTHO05D006463 8.2e-34 147.5 113 66.4
BolC1t01733H Brassica oleracea HOM05D005411 ORTHO05D006463 8.2e-34 147.5 113 66.4
BraA03t14482Z Brassica rapa HOM05D000022 ORTHO05D000071 8.2e-34 147.5 135 60.0
A01p14570 Brassica napus HOM05D005411 ORTHO05D006463 1.1e-33 147.1 113 66.4
BraA01t01399Z Brassica rapa HOM05D005411 ORTHO05D006463 1.1e-33 147.1 113 66.4
CARHR230670 Cardamine hirsuta HOM05D005411 ORTHO05D006463 1.1e-33 147.1 125 61.6
AT4G23330 Arabidopsis thaliana HOM05D005411 ORTHO05D006463 1.4e-33 146.7 112 67.0
MSTRG.25610 Avicennia marina HOM05D005411 ORTHO05D006463 1.8e-33 146.4 113 62.8
BcaNung03266 Brassica carinata HOM05D005411 ORTHO05D006463 1.8e-33 146.4 131 60.3
A03p54210 Brassica napus HOM05D005411 ORTHO05D006463 3.1e-33 145.6 113 66.4
FAN13G2772 Fragaria x ananassa HOM05D005411 ORTHO05D006463 4.1e-33 145.2 110 72.7
Carub.0007s1784 Capsella rubella HOM05D005411 ORTHO05D006463 5.3e-33 144.8 129 62.0
BcaC03g18356 Brassica carinata HOM05D005411 ORTHO05D006463 1.2e-32 143.7 113 65.5
BcaNung01456 Brassica carinata HOM05D005411 ORTHO05D006463 1.2e-32 143.7 132 58.3
C02p64340 Brassica napus HOM05D005411 ORTHO05D006463 1.2e-32 143.7 113 65.5
C07p52580 Brassica napus HOM05D000022 ORTHO05D000071 1.2e-32 143.7 132 58.3
BolC7t45755H Brassica oleracea HOM05D005411 ORTHO05D006463 1.2e-32 143.7 132 58.3
FAN04G3034 Fragaria x ananassa HOM05D005411 ORTHO05D006463 1.2e-32 143.7 110 71.8
Sabra01G0078400 Salix brachista HOM05D005411 ORTHO05D006463 2.0e-32 142.9 94 76.6
Lj8E221T1 Lonicera japonica HOM05D005411 ORTHO05D006463 1.0e-31 140.6 103 68.9
FAN08G0497 Fragaria x ananassa HOM05D005411 ORTHO05D006463 1.3e-31 140.2 110 70.9
Cfa012226 Carpinus fangiana HOM05D005411 ORTHO05D006463 1.7e-31 139.8 90 78.9
FAN18G0348 Fragaria x ananassa HOM05D005411 ORTHO05D006463 1.7e-31 139.8 90 78.9
Rhsim07G0090400 Rhododendron simsii HOM05D005411 ORTHO05D006463 5.0e-31 138.3 112 66.1
Thecc.03G279100 Theobroma cacao HOM05D005411 ORTHO05D006463 1.1e-30 137.1 90 77.8
Os07g0483400 Oryza sativa ssp. japonica HOM05D005411 ORTHO05D006463 5.5e-30 134.8 109 62.4
TAR374G0701 Trochodendron aralioides HOM05D005411 ORTHO05D006463 1.6e-29 133.3 90 74.4
AUR62022799 Chenopodium quinoa HOM05D005411 ORTHO05D006463 7.9e-29 131.0 90 68.9
Aqoxy7G00317 Aquilegia oxysepala HOM05D005411 ORTHO05D006463 1.0e-28 130.6 90 68.9
MELO3C016353.2 Cucumis melo HOM05D005411 ORTHO05D006463 1.0e-28 130.6 90 74.4
Hund16039 Selenicereus undatus HOM05D005411 ORTHO05D006463 1.4e-28 130.2 110 60.9
SGA_v2.0_scaffold173G39183 Striga asiatica HOM05D005411 ORTHO05D006463 1.5e-27 126.7 89 67.4
Aa31LG9G10800 Aethionema arabicum HOM05D005411 ORTHO05D006463 6.3e-26 121.3 90 66.7
CDE11G0686 Ceratophyllum demersum HOM05D003133 ORTHO05D006463 1.4e-25 120.2 89 65.2
SEGI_09083 Sequoiadendron giganteum HOM05D005411 ORTHO05D006463 3.1e-25 119.0 105 57.1
Duzib205G1808 Durio zibethinus HOM05D005411 ORTHO05D006463 5.3e-25 118.2 77 74.0
AUR62012163 Chenopodium quinoa HOM05D005411 ORTHO05D006463 8.5e-23 110.9 129 48.1
Gohir.D03G151300 Gossypium hirsutum HOM05D005411 ORTHO05D006463 1.9e-22 109.8 75 74.7
EL10Ac2g04672 Beta vulgaris HOM05D005411 ORTHO05D006463 2.5e-22 109.4 96 57.3
Zm00001eb104990 Zea mays HOM05D005411 ORTHO05D006463 9.4e-22 107.5 83 63.9
BolC5t34770H Brassica oleracea HOM05D005411 ORTHO05D006463 6.1e-21 104.8 94 61.7
Sc01g0009600 Simmondsia chinensis HOM05D005411 ORTHO05D006463 6.1e-21 104.8 76 65.8
C01p18020 Brassica napus HOM05D005411 ORTHO05D006463 1.4e-20 103.6 76 67.1
Pp3c11_2200 Physcomitrium patens HOM05D005411 ORTHO05D006463 3.9e-20 102.1 102 51.0
BcaNung00981 Brassica carinata HOM05D005411 ORTHO05D006463 5.2e-20 101.7 125 48.8
CDE09G0994 Ceratophyllum demersum HOM05D005411 ORTHO05D006463 8.8e-20 100.9 75 65.3
Potri.003G127900 Populus trichocarpa HOM05D005411 ORTHO05D006463 3.3e-19 99.0 122 50.0
BcaNung00977 Brassica carinata HOM05D005411 ORTHO05D006463 7.4e-19 97.8 68 69.1
Mapoly0008s0209 Marchantia polymorpha HOM05D005411 ORTHO05D006463 3.7e-18 95.5 99 45.5
CSS0044618 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 6.5e-15 84.7 59 74.6
Oeu047371.1 Olea europaea HOM05D005411 ORTHO05D006463 8.5e-15 84.3 69 59.4
AagrBONN_evm.TU.Sc2ySwM_369.479 Anthoceros agrestis HOM05D005411 ORTHO05D006463 1.1e-14 84.0 84 48.8
Atru.chr9.2185 Acer truncatum HOM05D005411 ORTHO05D006463 1.9e-14 83.2 86 54.7
Hma1.2p1_0377F.1_g139290 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 2.5e-14 82.8 57 75.4
Duzib084G0828 Durio zibethinus HOM05D005411 ORTHO05D006463 4.2e-14 82.0 71 57.7
SHI07138 Sapria himalayana HOM05D005411 ORTHO05D006463 9.4e-14 80.9 60 66.7
HPP92_001497 Vanilla planifolia HOM05D005411 ORTHO05D006463 2.6e-11 72.8 43 79.1
SMO329G0027 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 1.3e-10 70.5 80 45.0
SMO358G0504 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 1.3e-10 70.5 92 42.4
BcaC01g04135 Brassica carinata HOM05D005411 ORTHO05D006463 1.7e-10 70.1 56 62.5
BolC3t16740H Brassica oleracea HOM05D005411 ORTHO05D006463 3.7e-10 68.9 68 55.9
C03p44770 Brassica napus HOM05D005411 ORTHO05D006463 4.8e-10 68.6 68 55.9
Sabra17G0003100 Salix brachista HOM05D005411 ORTHO05D006463 5.3e-09 65.1 45 71.1
Sabra17G0003800 Salix brachista HOM05D005411 ORTHO05D006463 5.3e-09 65.1 45 71.1
Sabra18G0123000 Salix brachista HOM05D005411 ORTHO05D006463 2.0e-08 63.2 45 68.9
Sabra14G0123800 Salix brachista HOM05D005411 ORTHO05D006463 2.7e-08 62.8 45 68.9
Hund13808 Selenicereus undatus HOM05D005411 ORTHO05D006463 8.5e-07 57.8 56 60.7
Eucgr.H02258 Eucalyptus grandis HOM05D005411 ORTHO05D006463 1.5e-06 57.0 36 80.6
COL.COLO4_34468 Corchorus olitorius HOM05D005411 ORTHO05D006463 3.2e-06 55.8 47 66.0
Sabra17G0034500 Salix brachista HOM05D005411 ORTHO05D006463 3.2e-06 55.8 38 73.7
BcaB05g22557 Brassica carinata HOM05D002513 ORTHO05D002720 4.2e-06 55.5 50 58.0


User provided reference genes

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