Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G119100 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 8.5e-73 276.9 143 100.0
VMungo1215G0699 Vigna mungo HOM05D007735 ORTHO05D009638 2.8e-68 261.9 144 95.8
Glyma.01G156500 Glycine max HOM05D007735 ORTHO05D009638 9.1e-67 256.9 143 92.3
Glyma.11G088300 Glycine max HOM05D007735 ORTHO05D009638 1.6e-63 246.1 144 88.9
Lalb_Chr16g0380221 Lupinus albus HOM05D007735 ORTHO05D009638 1.7e-52 209.5 139 76.3
Ca_25020_v3 Cicer arietinum L. HOM05D007735 ORTHO05D009638 1.4e-51 206.5 145 75.9
TPR.G33757 Trifolium pratense HOM05D001957 ORTHO05D002015 1.8e-51 206.1 149 75.8
Medtr5g024910 Medicago truncatula HOM05D007735 ORTHO05D009638 9.1e-51 203.8 148 75.7
Lalb_Chr09g0324871 Lupinus albus HOM05D007735 ORTHO05D009638 1.9e-48 196.1 140 74.3
Psat2g147360 Pisum sativum HOM05D007735 ORTHO05D009638 4.2e-48 194.9 149 69.1
Glyma.09G195900 Glycine max HOM05D007735 ORTHO05D009638 8.3e-44 180.6 140 67.1
Lj2g0017807 Lotus japonicus HOM05D007735 ORTHO05D009638 1.8e-43 179.5 139 74.8
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 1.2e-42 176.8 146 65.8
Lalb_Chr05g0214991 Lupinus albus HOM05D007735 ORTHO05D009638 1.3e-41 173.3 140 70.0
TPR.G19311 Trifolium pratense HOM05D007735 ORTHO05D009638 8.9e-38 160.6 146 65.8
Phvul.003G272000 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 2.2e-36 156.0 141 61.7
LjContig00247g0020335 Lotus japonicus HOM05D007735 ORTHO05D009638 8.3e-36 154.1 148 64.2
arahy.Tifrunner.gnm1.ann1.Q37N58 Arachis hypogaea HOM05D007735 ORTHO05D009638 1.8e-35 152.9 150 62.7
arahy.Tifrunner.gnm1.ann1.S9U9HD Arachis hypogaea HOM05D007735 ORTHO05D009638 1.8e-35 152.9 150 62.7
Medtr8g072610 Medicago truncatula HOM05D007735 ORTHO05D009638 3.1e-35 152.1 134 67.2
VMungo0251G0553 Vigna mungo HOM05D007735 ORTHO05D009638 2.7e-34 149.1 141 62.4
Lalb_Chr05g0229481 Lupinus albus HOM05D007735 ORTHO05D009638 1.2e-31 140.2 129 62.8
Psat4g107200 Pisum sativum HOM05D007735 ORTHO05D009638 4.7e-31 138.3 143 58.7
Cc07_g12240 Coffea canephora HOM05D007735 ORTHO05D009638 5.8e-21 104.8 135 50.4
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 1.7e-20 103.2 137 54.0
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 1.4e-19 100.1 141 50.4
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 2.4e-19 99.4 134 50.0
Eucgr.J02566 Eucalyptus grandis HOM05D007735 ORTHO05D009638 4.1e-19 98.6 157 47.1
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 9.2e-19 97.4 137 50.4
Solyc02g082240.1 Solanum lycopersicum HOM05D007735 ORTHO05D009638 2.3e-17 92.8 136 47.8
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 2.3e-17 92.8 130 50.8
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 3.0e-17 92.4 135 47.4
Sopen02g026900 Solanum pennellii HOM05D007735 ORTHO05D009638 5.0e-17 91.7 135 48.1
CSS0025501 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 8.6e-17 90.9 125 48.0
Prupe.7G187700 Prunus persica HOM05D007735 ORTHO05D009638 1.9e-16 89.7 143 49.0
Potri.011G145200 Populus trichocarpa HOM05D007735 ORTHO05D009638 7.3e-16 87.8 133 47.4
Sc03g0004120 Simmondsia chinensis HOM05D007735 ORTHO05D009638 9.5e-16 87.4 123 46.3
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 1.6e-15 86.7 135 41.5
RcHm_v2.0_Chr2g0096741 Rosa chinensis HOM05D007735 ORTHO05D009638 1.6e-15 86.7 132 50.8
Peaxi162Scf00918g00052 Petunia axillaris HOM05D007735 ORTHO05D009638 2.1e-15 86.3 133 46.6
Nitab4.5_0000855g0160 Nicotiana tabacum HOM05D007735 ORTHO05D009638 3.6e-15 85.5 136 47.8
Thecc.01G001800 Theobroma cacao HOM05D007735 ORTHO05D009638 4.7e-15 85.1 143 46.2
Aqoxy6G03024 Aquilegia oxysepala HOM05D007735 ORTHO05D009638 6.2e-15 84.7 145 40.7
FAN23G3070 Fragaria x ananassa HOM05D007735 ORTHO05D009638 6.2e-15 84.7 132 45.5
FvH4_1g09950 Fragaria vesca HOM05D007735 ORTHO05D009638 1.8e-14 83.2 133 46.6
FAN19G1654 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.8e-14 83.2 133 46.6
Manes.02G117000 Manihot esculenta HOM05D007735 ORTHO05D009638 4.0e-14 82.0 114 46.5
Sabra11G0130300 Salix brachista HOM05D007735 ORTHO05D009638 5.2e-14 81.6 127 44.9
Potri.001G456700 Populus trichocarpa HOM05D007735 ORTHO05D009638 1.5e-13 80.1 109 50.5
FAN26G0974 Fragaria x ananassa HOM05D007735 ORTHO05D009638 2.0e-13 79.7 123 45.5
DCAR_014121 Daucus carota HOM05D007735 ORTHO05D009638 2.6e-13 79.3 125 44.8
DCAR_014122 Daucus carota HOM05D007735 ORTHO05D009638 2.6e-13 79.3 125 44.8
FAN23G2983 Fragaria x ananassa HOM05D007735 ORTHO05D009638 2.6e-13 79.3 123 45.5
Nitab4.5_0004448g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 3.4e-13 79.0 139 47.5
FAN28G1635 Fragaria x ananassa HOM05D007735 ORTHO05D009638 4.4e-13 78.6 135 45.9
Sabra16G0309000 Salix brachista HOM05D007735 ORTHO05D009638 5.8e-13 78.2 113 47.8
arahy.Tifrunner.gnm1.ann1.KD7YUX Arachis hypogaea HOM05D007735 ORTHO05D009638 3.7e-12 75.5 130 53.1
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 3.2e-11 72.4 130 43.8
Eucgr.I02199 Eucalyptus grandis HOM05D007735 ORTHO05D009638 5.4e-11 71.6 153 35.3
Gohir.A05G393900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 5.4e-11 71.6 129 44.2
Gorai.012G025100 Gossypium raimondii HOM05D007735 ORTHO05D009638 1.6e-10 70.1 128 43.0
ECA246G0225 Erigeron canadensis HOM05D007735 ORTHO05D009638 2.1e-10 69.7 134 39.6
SGA_v2.0_scaffold2G00933 Striga asiatica HOM05D007735 ORTHO05D009638 2.1e-10 69.7 126 36.5
COL.COLO4_22568 Corchorus olitorius HOM05D007735 ORTHO05D009638 2.7e-10 69.3 136 42.6
Nitab4.5_0006309g0010 Nicotiana tabacum HOM05D007735 ORTHO05D009638 2.7e-10 69.3 113 43.4
SGA_v2.0_scaffold108G30951 Striga asiatica HOM05D007735 ORTHO05D009638 4.6e-10 68.6 135 37.8
Gohir.D04G020900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 6.0e-10 68.2 128 43.8
Oeu045753.2 Olea europaea HOM05D007735 ORTHO05D009638 1.0e-09 67.4 125 40.0
Nn6g31607 Nelumbo nucifera HOM05D007735 ORTHO05D009638 1.3e-09 67.0 105 47.6
Haze_22869 Corylus avellana HOM05D007735 ORTHO05D009638 6.6e-09 64.7 127 40.2
CsaV3_3G000130 Cucumis sativus L. HOM05D007735 ORTHO05D009638 6.6e-09 64.7 123 37.4
CsaV3_UNG155170 Cucumis sativus L. HOM05D007735 ORTHO05D009638 6.6e-09 64.7 123 37.4
Lsat_1_v5_gn_8_114101 Lactuca sativa HOM05D007735 ORTHO05D009638 6.6e-09 64.7 112 46.4
Sed0019252 Sechium edule HOM05D007735 ORTHO05D009638 1.1e-08 63.9 126 38.9
CiPaw.07G000500 Carya illinoinensis HOM05D007735 ORTHO05D009638 1.5e-08 63.5 121 41.3
Oeu043409.2 Olea europaea HOM05D007735 ORTHO05D009638 2.5e-08 62.8 132 37.9
PGSC0003DMG400018690 Solanum tuberosum HOM05D007735 ORTHO05D009638 9.5e-08 60.8 126 40.5
CiPaw.07G132500 Carya illinoinensis HOM05D007735 ORTHO05D009638 1.6e-07 60.1 132 36.4
MELO3C013706.2 Cucumis melo HOM05D007735 ORTHO05D009638 1.6e-07 60.1 104 42.3
Lsat_1_v5_gn_8_114121 Lactuca sativa HOM05D007735 ORTHO05D009638 4.7e-07 58.5 108 45.4
PGSC0003DMG400015147 Solanum tuberosum HOM05D007735 ORTHO05D009638 4.7e-07 58.5 106 38.7
ATR0605G038 Amborella trichopoda HOM05D007735 ORTHO05D009638 6.2e-07 58.2 108 43.5
ClCG10G000110 Citrullus lanatus HOM05D007735 ORTHO05D009638 6.2e-07 58.2 121 35.5
Nitab4.5_0000235g0170 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.4e-06 57.0 79 43.0
Cpa.g.sc6.350 Carica papaya HOM05D007735 ORTHO05D009638 1.8e-06 56.6 103 42.7
Lsat_1_v5_gn_2_74220 Lactuca sativa HOM05D007735 ORTHO05D009638 1.8e-06 56.6 127 39.4


User provided reference genes

Program Settings