Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 1.1e-175 619.8 306 100.0
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 4.6e-169 597.8 306 96.7
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 6.3e-166 587.4 306 95.4
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 5.9e-164 580.9 306 93.8
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 1.9e-162 575.9 306 91.5
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 3.6e-161 571.6 306 91.5
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 1.5e-159 566.2 306 89.9
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 2.6e-159 565.5 306 90.5
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 4.4e-159 564.7 306 89.9
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 5.7e-159 564.3 306 89.9
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 2.2e-158 562.4 306 89.9
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 1.1e-154 550.1 306 86.6
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 2.7e-153 545.4 306 86.6
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 1.0e-152 543.5 306 85.3
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 1.8e-152 542.7 306 85.3
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 5.2e-152 541.2 306 84.6
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 4.8e-150 534.6 306 83.7
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 1.4e-149 533.1 306 83.3
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 9.1e-149 530.4 306 82.7
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 5.9e-148 527.7 307 83.4
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 7.7e-148 527.3 307 82.7
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 2.2e-147 525.8 307 83.1
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 6.5e-147 524.2 307 82.7
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 1.1e-146 523.5 307 82.7
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 1.9e-146 522.7 306 81.7
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 1.9e-146 522.7 307 83.1
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 3.2e-146 521.9 307 83.1
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 7.2e-146 520.8 307 83.1
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.2e-145 520.0 307 83.1
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 1.2e-145 520.0 307 82.7
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.6e-145 519.6 306 81.0
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 1.6e-145 519.6 307 81.4
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 3.6e-145 518.5 307 82.4
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 8.0e-145 517.3 306 83.0
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 8.0e-145 517.3 307 81.8
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 1.0e-144 516.9 307 83.1
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 1.8e-144 516.2 307 80.5
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 1.5e-143 513.1 307 80.8
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 2.0e-143 512.7 307 80.8
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 4.4e-143 511.5 307 81.8
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 7.5e-143 510.8 322 77.3
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 1.3e-142 510.0 307 79.5
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 1.3e-142 510.0 307 80.8
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 1.7e-142 509.6 390 67.4
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 1.1e-141 506.9 307 79.2
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 1.8e-141 506.1 307 80.5
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 1.8e-141 506.1 307 80.5
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 4.1e-141 505.0 307 77.5
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 3.5e-140 501.9 306 79.4
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 1.0e-139 500.4 307 78.5
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 2.2e-139 499.2 307 78.5
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 5.0e-139 498.0 304 78.9
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 8.5e-139 497.3 307 78.2
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 7.2e-138 494.2 370 68.1
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 4.7e-137 491.5 307 79.2
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 3.0e-136 488.8 307 76.9
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 6.8e-136 487.6 288 82.3
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 2.0e-135 486.1 307 76.2
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 2.6e-135 485.7 307 76.2
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 3.4e-135 485.3 358 69.0
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 1.7e-134 483.0 307 75.9
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 8.3e-134 480.7 307 74.9
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 8.3e-134 480.7 284 84.2
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 1.8e-133 479.6 307 75.2
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 2.4e-133 479.2 307 74.3
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 9.1e-133 477.2 306 73.5
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 2.9e-131 472.2 307 73.3
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 2.5e-130 469.2 292 81.2
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 1.2e-129 466.8 306 72.2
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 2.8e-129 465.7 307 72.6
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 2.8e-129 465.7 276 80.8
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 4.7e-129 464.9 307 73.6
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.4e-128 463.4 275 80.7
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 1.2e-127 460.3 371 63.6
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 1.8e-120 436.4 307 71.3
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 4.9e-118 428.3 277 74.0
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 3.2e-117 425.6 243 84.4
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 5.4e-117 424.9 293 72.7
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 3.5e-116 422.2 278 73.4
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 6.0e-116 421.4 307 68.1
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 1.1e-112 410.6 277 71.5
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 2.7e-108 396.0 310 61.9
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 6.0e-108 394.8 310 61.9
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 2.3e-107 392.9 235 81.7
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 1.9e-106 389.8 307 66.1
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 6.2e-105 384.8 306 59.5
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 6.4e-102 374.8 297 62.3
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 1.6e-100 370.2 236 75.0
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 5.8e-79 298.5 316 50.3
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 8.4e-78 294.7 250 63.2
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 8.1e-73 278.1 190 68.9
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 4.2e-61 239.2 130 86.9
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 6.7e-59 231.9 310 43.5
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 1.3e-54 217.6 148 71.6
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.7e-54 217.2 170 68.2
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 2.9e-54 216.5 565 29.6
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 5.0e-54 215.7 282 43.6
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 1.1e-32 144.8 88 85.2
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 1.5e-26 124.4 72 84.7
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 1.0e-22 111.7 70 68.6
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 2.9e-22 110.2 221 33.9
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 2.3e-19 100.5 96 50.0
Cre06.g298950 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D143024 1.8e-08 64.3 173 31.8
Rhsim08G0136300 Rhododendron simsii HOM05D007381 ORTHO05D006450 5.9e-07 59.3 53 62.3
COL.COLO4_34115 Corchorus olitorius HOM05D007381 ORTHO05D159467 1.7e-06 57.8 39 71.8


User provided reference genes

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