Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00596g00105 Petunia axillaris HOM05D007388 ORTHO05D009421 1.4e-122 443.0 223 100.0
Nitab4.5_0001705g0020 Nicotiana tabacum HOM05D007388 ORTHO05D009421 1.5e-92 343.2 222 81.1
CAN.G246.5 Capsicum annuum HOM05D007388 ORTHO05D009421 7.7e-73 277.7 211 71.6
Nitab4.5_0000268g0090 Nicotiana tabacum HOM05D007388 ORTHO05D009421 9.5e-71 270.8 221 67.0
Sopen06g034360 Solanum pennellii HOM05D007388 ORTHO05D009421 3.0e-69 265.8 209 70.8
Solyc06g082970.3 Solanum lycopersicum HOM05D007388 ORTHO05D009421 2.6e-68 262.7 209 69.9
PGSC0003DMG400027673 Solanum tuberosum HOM05D007388 ORTHO05D009421 3.4e-68 262.3 211 71.1
MSTRG.25983 Avicennia marina HOM05D007388 ORTHO05D009421 2.3e-61 239.6 198 64.1
PGR044G0912 Punica granatum HOM05D007388 ORTHO05D009421 7.5e-60 234.6 205 60.0
Eucgr.C03150 Eucalyptus grandis HOM05D007388 ORTHO05D009421 1.9e-58 229.9 214 59.8
COL.COLO4_21128 Corchorus olitorius HOM05D007388 ORTHO05D009421 2.4e-58 229.6 221 57.5
CSS0004113 Camellia sinensis var. sinensis HOM05D007388 ORTHO05D009421 9.2e-58 227.6 168 66.1
Dinv41838 Davidia involucrata HOM05D007388 ORTHO05D009421 9.2e-58 227.6 172 68.0
TWI63G1062 Tripterygium wilfordii HOM05D007388 ORTHO05D009421 1.6e-57 226.9 216 56.0
TAR383G1008 Trochodendron aralioides HOM05D007388 ORTHO05D009421 2.0e-57 226.5 223 57.4
Gohir.A05G039100 Gossypium hirsutum HOM05D007388 ORTHO05D009421 7.8e-57 224.6 190 62.1
Atru.chr7.1857 Acer truncatum HOM05D007388 ORTHO05D009421 1.7e-56 223.4 218 56.9
Migut.A00083 Erythranthe guttata HOM05D007388 ORTHO05D009421 1.7e-56 223.4 222 57.7
Gohir.D05G040600 Gossypium hirsutum HOM05D007388 ORTHO05D009421 6.6e-56 221.5 190 61.6
Manes.16G084900 Manihot esculenta HOM05D007388 ORTHO05D009421 1.9e-55 219.9 189 58.7
Sabra06G0171500 Salix brachista HOM05D007388 ORTHO05D009421 2.5e-55 219.5 220 54.5
Potri.006G221900 Populus trichocarpa HOM05D007388 ORTHO05D009421 7.3e-55 218.0 222 55.0
QL02p016663 Quercus lobata HOM05D007388 ORTHO05D009421 9.5e-55 217.6 219 54.3
ECA240G1505 Erigeron canadensis HOM05D007388 ORTHO05D009421 1.2e-54 217.2 194 59.3
CsaV3_4G036020 Cucumis sativus L. HOM05D007388 ORTHO05D009421 2.1e-54 216.5 219 55.7
GSVIVG01035454001 Vitis vinifera HOM05D007388 ORTHO05D009421 2.1e-54 216.5 163 66.9
ClCG05G015710 Citrullus lanatus HOM05D007388 ORTHO05D009421 3.6e-54 215.7 236 52.5
HanXRQChr04g0097861 Helianthus annuus HOM05D007388 ORTHO05D009421 3.6e-54 215.7 216 56.0
MD15G1051600 Malus domestica HOM05D007388 ORTHO05D009421 3.6e-54 215.7 184 60.9
Nn8g38703 Nelumbo nucifera HOM05D007388 ORTHO05D009421 3.6e-54 215.7 205 58.0
MELO3C016910.2 Cucumis melo HOM05D007388 ORTHO05D009421 8.1e-54 214.5 221 52.9
AUR62020582 Chenopodium quinoa HOM05D007388 ORTHO05D009421 1.8e-53 213.4 239 53.1
AUR62009088 Chenopodium quinoa HOM05D007388 ORTHO05D009421 6.8e-53 211.5 241 52.7
Sed0027665 Sechium edule HOM05D007388 ORTHO05D009421 6.8e-53 211.5 194 56.7
Actinidia25694 Actinidia chinensis HOM05D007388 ORTHO05D009421 1.2e-52 210.7 162 65.4
CiPaw.16G070200 Carya illinoinensis HOM05D007388 ORTHO05D009421 4.4e-52 208.8 207 55.1
Duzib168G1804 Durio zibethinus HOM05D007388 ORTHO05D009421 5.8e-52 208.4 190 60.0
Oeu000765.1 Olea europaea HOM05D007388 ORTHO05D009421 5.8e-52 208.4 268 47.4
Ciclev10009451m.g Citrus clementina HOM05D007388 ORTHO05D009421 7.5e-52 208.0 220 55.0
Medtr3g104980 Medicago truncatula HOM05D007388 ORTHO05D009421 7.5e-52 208.0 204 55.9
THA.LOC104799581 Tarenaya hassleriana HOM05D007388 ORTHO05D009421 9.8e-52 207.6 196 56.1
Psat5g102720 Pisum sativum HOM05D007388 ORTHO05D009421 2.2e-51 206.5 159 61.6
TPR.G3529 Trifolium pratense HOM05D007388 ORTHO05D009421 3.7e-51 205.7 217 50.7
Lalb_Chr11g0063321 Lupinus albus HOM05D007388 ORTHO05D009421 7.1e-50 201.4 169 59.2
PSO421G0687 Papaver somniferum HOM05D007388 ORTHO05D009421 1.6e-49 200.3 196 55.6
Cfa018015 Carpinus fangiana HOM05D007388 ORTHO05D009421 2.7e-49 199.5 225 52.9
RcHm_v2.0_Chr6g0311651 Rosa chinensis HOM05D007388 ORTHO05D009421 2.7e-49 199.5 221 50.7
CARHR191660 Cardamine hirsuta HOM05D007388 ORTHO05D009421 4.6e-49 198.7 203 51.7
FvH4_2g31130 Fragaria vesca HOM05D007388 ORTHO05D009421 6.0e-49 198.4 223 49.3
Aa31LG1G13520 Aethionema arabicum HOM05D007388 ORTHO05D009421 7.8e-49 198.0 206 52.9
FAN24G3326 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.0e-48 197.6 178 57.3
BcaB08g36472 Brassica carinata HOM05D007388 ORTHO05D009421 1.3e-48 197.2 219 49.3
AT5G21430 Arabidopsis thaliana HOM05D007388 ORTHO05D009421 2.3e-48 196.4 202 51.0
CDE06G1148 Ceratophyllum demersum HOM05D007388 ORTHO05D009421 3.9e-48 195.7 216 52.3
Cc08_g01260 Coffea canephora HOM05D007388 ORTHO05D009421 3.9e-48 195.7 157 63.7
FAN20G0472 Fragaria x ananassa HOM05D007388 ORTHO05D009421 3.9e-48 195.7 178 56.7
AL6G32850 Arabidopsis lyrata HOM05D007388 ORTHO05D009421 6.6e-48 194.9 202 51.0
A10p18840 Brassica napus HOM05D007388 ORTHO05D009421 1.9e-47 193.4 206 50.0
DCAR_003716 Daucus carota HOM05D007388 ORTHO05D009421 2.5e-47 193.0 216 49.5
Carub.0006s1952 Capsella rubella HOM05D007388 ORTHO05D009421 3.3e-47 192.6 202 50.0
Rhsim10G0152000 Rhododendron simsii HOM05D007388 ORTHO05D009421 5.6e-47 191.8 181 54.1
BraA10t43964Z Brassica rapa HOM05D007388 ORTHO05D009421 7.3e-47 191.4 206 50.0
Glyma.04G055400 Glycine max HOM05D007388 ORTHO05D009421 7.3e-47 191.4 210 51.4
Lj1g0010451 Lotus japonicus HOM05D007388 ORTHO05D009421 7.3e-47 191.4 208 51.0
Atru.BG.20.p Acer truncatum HOM05D007388 ORTHO05D009421 9.5e-47 191.0 128 70.3
Thhalv10014636m.g Eutrema salsugineum HOM05D007388 ORTHO05D009421 9.5e-47 191.0 214 50.0
Thecc.09G062100 Theobroma cacao HOM05D007388 ORTHO05D009421 1.2e-46 190.7 221 49.8
MBI19_g11844_MAGBIO Magnolia biondii HOM05D007388 ORTHO05D009421 2.1e-46 189.9 187 55.1
BcaC04g19512 Brassica carinata HOM05D007388 ORTHO05D009421 2.8e-46 189.5 206 49.5
C09p54850 Brassica napus HOM05D007388 ORTHO05D009421 2.8e-46 189.5 206 49.5
BolC9t58346H Brassica oleracea HOM05D007388 ORTHO05D009421 2.8e-46 189.5 206 49.5
Phvul.009G081500 Phaseolus vulgaris HOM05D007388 ORTHO05D009421 2.8e-46 189.5 207 50.2
ATR0598G070 Amborella trichopoda HOM05D007388 ORTHO05D009421 3.6e-46 189.1 221 48.4
Sp6g23310 Schrenkiella parvula HOM05D007388 ORTHO05D009421 3.6e-46 189.1 213 47.4
FAN27G0155 Fragaria x ananassa HOM05D007388 ORTHO05D009421 8.1e-46 188.0 242 45.0
Glyma.06G055600 Glycine max HOM05D007388 ORTHO05D009421 1.1e-45 187.6 219 48.9
EL10Ac2g03792 Beta vulgaris HOM05D007388 ORTHO05D009421 8.9e-45 184.5 145 63.4
Os12g0498500 Oryza sativa ssp. japonica HOM05D007388 ORTHO05D009421 2.0e-44 183.3 148 60.8
CANSAT25G2576 Cannabis sativa HOM05D007388 ORTHO05D009421 1.3e-43 180.6 154 60.4
VMungo1309G3057 Vigna mungo HOM05D007388 ORTHO05D009421 1.7e-43 180.3 217 49.8
Zm00001eb409580 Zea mays HOM05D007388 ORTHO05D009421 2.2e-43 179.9 148 62.2
Gorai.009G041100 Gossypium raimondii HOM05D007388 ORTHO05D009421 2.9e-43 179.5 160 60.0
CDE07G0202 Ceratophyllum demersum HOM05D007388 ORTHO05D001048 1.1e-42 177.6 168 56.0
Lsat_1_v5_gn_7_58400 Lactuca sativa HOM05D007388 ORTHO05D009421 2.4e-42 176.4 158 60.8
Lj7C227T7 Lonicera japonica HOM05D007388 ORTHO05D009421 2.4e-42 176.4 160 59.4
arahy.Tifrunner.gnm1.ann1.P6UV73 Arachis hypogaea HOM05D007388 ORTHO05D009421 4.1e-42 175.6 195 50.3
arahy.Tifrunner.gnm1.ann1.044LWD Arachis hypogaea HOM05D000560 ORTHO05D000417 5.4e-42 175.3 195 50.3
Prupe.1G405600 Prunus persica HOM05D007388 ORTHO05D009421 9.2e-42 174.5 151 60.9
vmacro12914 Vaccinium macrocarpon HOM05D007388 ORTHO05D009421 1.9e-39 166.8 155 54.8
Aqoxy7G01075 Aquilegia oxysepala HOM05D007388 ORTHO05D009421 1.8e-37 160.2 128 64.1
Lj7C225T7 Lonicera japonica HOM05D007388 ORTHO05D009421 2.4e-37 159.8 160 56.2
Ca_15836_v3 Cicer arietinum L. HOM05D007388 ORTHO05D009421 2.6e-36 156.4 133 56.4
unitig_4.g30329 Utricularia gibba HOM05D007388 ORTHO05D009421 3.5e-25 119.4 155 45.8
AagrBONN_evm.TU.Sc2ySwM_368.3296 Anthoceros agrestis HOM05D007388 ORTHO05D009421 3.0e-24 116.3 190 39.5
Pp3c4_14700 Physcomitrium patens HOM05D007388 ORTHO05D009421 2.8e-22 109.8 226 36.3
Pp3c12_9640 Physcomitrium patens HOM05D007388 ORTHO05D009421 1.5e-20 104.0 172 39.5
Hma1.2p1_0231F.1_g097390 Hydrangea macrophylla HOM05D007388 ORTHO05D009421 7.6e-20 101.7 98 56.1
Mapoly0129s0003 Marchantia polymorpha HOM05D007388 ORTHO05D009421 2.5e-15 86.7 188 33.0
SMO223G0044 Selaginella moellendorffii HOM05D007480 ORTHO05D009460 2.7e-09 66.6 104 32.7
BNapus_Darmor_BZH_scaffold_38p01020 Brassica napus HOM05D007388 ORTHO05D009421 1.8e-08 63.9 65 49.2


User provided reference genes

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