Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G1886 Papaver somniferum HOM05D007411 ORTHO05D009025 5.7e-123 444.5 266 100.0
PSO210G5563 Papaver somniferum HOM05D007411 ORTHO05D009025 2.8e-93 345.9 194 97.4
PSO724G0575 Papaver somniferum HOM05D007411 ORTHO05D009025 1.7e-21 107.5 123 49.6
Ciclev10006648m.g Citrus clementina HOM05D007411 ORTHO05D009025 3.1e-20 103.2 116 44.8
Prupe.1G017200 Prunus persica HOM05D007411 ORTHO05D009025 1.0e-18 98.2 125 44.8
Hma1.2p1_1572F.1_g291440 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 2.2e-18 97.1 153 37.9
Hma1.2p1_2201F.1_g317040 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 2.9e-18 96.7 153 37.9
TWI09G1055 Tripterygium wilfordii HOM05D007411 ORTHO05D009025 3.8e-18 96.3 141 38.3
Ca_24421_v3 Cicer arietinum L. HOM05D007411 ORTHO05D009025 3.2e-17 93.2 120 42.5
FAN07G0509 Fragaria x ananassa HOM05D007411 ORTHO05D009025 7.2e-17 92.0 142 38.7
Dinv14014 Davidia involucrata HOM05D007411 ORTHO05D009025 9.4e-17 91.7 129 42.6
FAN12G4330 Fragaria x ananassa HOM05D007411 ORTHO05D009025 9.4e-17 91.7 142 38.7
QL06p001698 Quercus lobata HOM05D007411 ORTHO05D009025 1.2e-16 91.3 109 45.0
arahy.Tifrunner.gnm1.ann1.SC2WWN Arachis hypogaea HOM05D007411 ORTHO05D009025 1.6e-16 90.9 136 39.0
arahy.Tifrunner.gnm1.ann1.UE7NK8 Arachis hypogaea HOM05D007411 ORTHO05D009025 1.6e-16 90.9 136 39.0
Cpa.g.sc58.79 Carica papaya HOM05D007411 ORTHO05D009025 2.1e-16 90.5 118 39.0
ClCG06G006330 Citrullus lanatus HOM05D007411 ORTHO05D009025 2.7e-16 90.1 139 40.3
FvH4_4g15980 Fragaria vesca HOM05D007411 ORTHO05D009025 2.7e-16 90.1 122 40.2
Migut.G00360 Erythranthe guttata HOM05D007411 ORTHO05D009025 6.1e-16 89.0 99 43.4
FAN17G1166 Fragaria x ananassa HOM05D007411 ORTHO05D009025 6.1e-16 89.0 142 38.0
Medtr5g006900 Medicago truncatula HOM05D007411 ORTHO05D009025 6.1e-16 89.0 133 42.1
MELO3C012663.2 Cucumis melo HOM05D007411 ORTHO05D009025 8.0e-16 88.6 127 41.7
CsaV3_7G022390 Cucumis sativus L. HOM05D007411 ORTHO05D009025 8.0e-16 88.6 131 42.0
Peaxi162Scf00092g00336 Petunia axillaris HOM05D007411 ORTHO05D009025 8.0e-16 88.6 98 41.8
Potri.010G085000 Populus trichocarpa HOM05D007411 ORTHO05D009025 1.0e-15 88.2 143 36.4
THA.LOC104808560 Tarenaya hassleriana HOM05D007411 ORTHO05D009025 1.0e-15 88.2 122 40.2
Nitab4.5_0002307g0080 Nicotiana tabacum HOM05D007411 ORTHO05D009025 1.4e-15 87.8 124 39.5
LjContig00222g0000468 Lotus japonicus HOM05D007411 ORTHO05D009025 1.8e-15 87.4 75 48.0
Aqoxy5G00439 Aquilegia oxysepala HOM05D007411 ORTHO05D009025 2.3e-15 87.0 123 42.3
Sopen09g031190 Solanum pennellii HOM05D007411 ORTHO05D009025 2.3e-15 87.0 128 37.5
CAN.G1094.25 Capsicum annuum HOM05D007411 ORTHO05D009025 3.0e-15 86.7 110 40.0
Nn6g34119 Nelumbo nucifera HOM05D007411 ORTHO05D009025 3.0e-15 86.7 148 41.2
SGA_v2.0_scaffold151G36714 Striga asiatica HOM05D007411 ORTHO05D009025 3.0e-15 86.7 148 35.8
MD16G1196900 Malus domestica HOM05D007411 ORTHO05D009025 3.9e-15 86.3 90 44.4
Medtr2g049980 Medicago truncatula HOM05D007411 ORTHO05D009025 3.9e-15 86.3 131 41.2
FAN22G0418 Fragaria x ananassa HOM05D007411 ORTHO05D009025 5.2e-15 85.9 142 37.3
Nitab4.5_0004062g0070 Nicotiana tabacum HOM05D007411 ORTHO05D009025 5.2e-15 85.9 125 38.4
Gohir.D09G219700 Gossypium hirsutum HOM05D007411 ORTHO05D009025 8.8e-15 85.1 137 35.8
Gorai.006G240700 Gossypium raimondii HOM05D007411 ORTHO05D009025 8.8e-15 85.1 137 35.8
MD13G1196400 Malus domestica HOM05D007411 ORTHO05D009025 8.8e-15 85.1 91 44.0
BcaB04g18262 Brassica carinata HOM05D007411 ORTHO05D009025 1.1e-14 84.7 157 36.9
A05p16750 Brassica napus HOM05D007411 ORTHO05D009025 1.1e-14 84.7 126 38.1
Solyc09g082310.2 Solanum lycopersicum HOM05D007411 ORTHO05D009025 1.1e-14 84.7 128 36.7
Gohir.A09G217300 Gossypium hirsutum HOM05D007411 ORTHO05D009025 1.5e-14 84.3 140 35.0
RcHm_v2.0_Chr4g0415591 Rosa chinensis HOM05D007411 ORTHO05D009025 1.5e-14 84.3 93 43.0
CSS0014995 Camellia sinensis var. sinensis HOM05D007411 ORTHO05D009025 2.0e-14 84.0 116 39.7
C06p16920 Brassica napus HOM05D007411 ORTHO05D009025 2.6e-14 83.6 106 41.5
BolC6t36888H Brassica oleracea HOM05D007411 ORTHO05D009025 2.6e-14 83.6 106 41.5
AT4G14805 Arabidopsis thaliana HOM05D007411 ORTHO05D009025 4.4e-14 82.8 140 36.4
ECA236G4939 Erigeron canadensis HOM05D007411 ORTHO05D009025 5.7e-14 82.4 133 38.3
Glyma.01G235100 Glycine max HOM05D007411 ORTHO05D009025 5.7e-14 82.4 116 37.9
RcHm_v2.0_Chr4g0391821 Rosa chinensis HOM05D007411 ORTHO05D009025 5.7e-14 82.4 86 40.7
A05p15610 Brassica napus HOM05D007411 ORTHO05D009025 7.4e-14 82.0 147 37.4
BraA05t20476Z Brassica rapa HOM05D007411 ORTHO05D009025 7.4e-14 82.0 143 37.1
Lsat_1_v5_gn_9_80381 Lactuca sativa HOM05D007411 ORTHO05D009025 1.3e-13 81.3 73 43.8
LjContig00222g0003473 Lotus japonicus HOM05D007411 ORTHO05D009025 1.3e-13 81.3 90 43.3
Phvul.002G042700 Phaseolus vulgaris HOM05D007411 ORTHO05D009025 1.7e-13 80.9 136 36.0
AL7G41060 Arabidopsis lyrata HOM05D007411 ORTHO05D009025 2.2e-13 80.5 117 36.8
A08p11480 Brassica napus HOM05D007411 ORTHO05D009025 2.2e-13 80.5 149 34.9
BraA08t33142Z Brassica rapa HOM05D007411 ORTHO05D009025 2.2e-13 80.5 149 34.9
BraA05t20579Z Brassica rapa HOM05D007411 ORTHO05D009025 2.8e-13 80.1 143 36.4
CANSAT78G1457 Cannabis sativa HOM05D007411 ORTHO05D009025 2.8e-13 80.1 148 33.8
DCAR_027228 Daucus carota HOM05D002080 ORTHO05D002062 2.8e-13 80.1 73 45.2
CARHR221360 Cardamine hirsuta HOM05D007411 ORTHO05D009025 3.7e-13 79.7 156 35.9
Psat2g190000 Pisum sativum HOM05D007411 ORTHO05D009025 3.7e-13 79.7 148 35.8
PGR004G0639 Punica granatum HOM05D007411 ORTHO05D009025 3.7e-13 79.7 122 44.3
Thecc.04G235100 Theobroma cacao HOM05D007411 ORTHO05D009025 3.7e-13 79.7 131 33.6
Cfa008473 Carpinus fangiana HOM05D007411 ORTHO05D009025 4.8e-13 79.3 116 43.1
CiPaw.01G198400 Carya illinoinensis HOM05D007411 ORTHO05D009025 4.8e-13 79.3 122 42.6
Sp7g12940 Schrenkiella parvula HOM05D007411 ORTHO05D009025 4.8e-13 79.3 106 37.7
TAR633G2267 Trochodendron aralioides HOM05D007411 ORTHO05D009025 4.8e-13 79.3 90 41.1
BcaC07g37855 Brassica carinata HOM05D007411 ORTHO05D009025 6.3e-13 79.0 127 37.0
BolC8t48245H Brassica oleracea HOM05D007411 ORTHO05D009025 6.3e-13 79.0 127 37.0
Eucgr.H03438 Eucalyptus grandis HOM05D007411 ORTHO05D009025 8.2e-13 78.6 95 38.9
HanXRQChr05g0131941 Helianthus annuus HOM05D007411 ORTHO05D009025 8.2e-13 78.6 109 36.7
Sed0024167 Sechium edule HOM05D007411 ORTHO05D009025 8.2e-13 78.6 88 43.2
BcaC02g11603 Brassica carinata HOM05D007411 ORTHO05D009025 1.1e-12 78.2 147 36.1
C04p13410 Brassica napus HOM05D007411 ORTHO05D009025 1.1e-12 78.2 147 36.1
Duzib151G0508 Durio zibethinus HOM05D007411 ORTHO05D009025 1.1e-12 78.2 92 38.0
Lalb_Chr05g0211151 Lupinus albus HOM05D007411 ORTHO05D009025 1.1e-12 78.2 122 38.5
Atru.chr4.2432 Acer truncatum HOM05D007411 ORTHO05D009025 1.4e-12 77.8 90 40.0
Actinidia23528 Actinidia chinensis HOM05D007411 ORTHO05D009025 1.4e-12 77.8 135 36.3
Thhalv10027383m.g Eutrema salsugineum HOM05D007411 ORTHO05D009025 1.4e-12 77.8 146 32.2
VMungo1215G0970 Vigna mungo HOM05D007411 ORTHO05D009025 1.4e-12 77.8 109 38.5
BcaC08g44271 Brassica carinata HOM05D007411 ORTHO05D009025 1.8e-12 77.4 117 37.6
SalBow2G3064 Salvia bowleyana HOM05D007411 ORTHO05D009025 1.8e-12 77.4 155 32.9
Sc13g0004560 Simmondsia chinensis HOM05D007411 ORTHO05D009025 2.4e-12 77.0 118 38.1
BcaB02g07857 Brassica carinata HOM05D007411 ORTHO05D009025 3.1e-12 76.6 106 39.6
COL.COLO4_21515 Corchorus olitorius HOM05D007411 ORTHO05D009025 1.2e-11 74.7 113 34.5
Manes.03G176101 Manihot esculenta HOM05D007411 ORTHO05D009025 2.0e-11 73.9 150 30.0
TPR.G3913 Trifolium pratense HOM05D007411 ORTHO05D009025 4.5e-11 72.8 88 44.3
Carub.0007s2732 Capsella rubella HOM05D007411 ORTHO05D009025 3.8e-10 69.7 157 30.6
CDE05G0749 Ceratophyllum demersum HOM05D007411 ORTHO05D009025 3.8e-10 69.7 128 33.6
Psat7g023320 Pisum sativum HOM05D007411 ORTHO05D009025 1.9e-09 67.4 99 40.4
Potri.008G155300 Populus trichocarpa HOM05D007411 ORTHO05D009025 1.6e-08 64.3 120 33.3
MBI11_g32995_MAGBIO Magnolia biondii HOM05D007411 ORTHO05D009025 4.7e-08 62.8 119 34.5
TAR633G1834 Trochodendron aralioides HOM05D007411 ORTHO05D009025 2.3e-07 60.5 88 39.8
TAR633G0575 Trochodendron aralioides HOM05D007411 ORTHO05D009025 4.4e-06 56.2 73 41.1


User provided reference genes

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