Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO801G0460 Papaver somniferum HOM05D000366 ORTHO05D000437 0.0e+00 1139.8 568 100.0
PSO339G5412 Papaver somniferum HOM05D000366 ORTHO05D000437 0.0e+00 1092.8 567 95.8
PSO384G1366 Papaver somniferum HOM05D000366 ORTHO05D000437 2.8e-188 662.5 575 62.4
PSO478G0388 Papaver somniferum HOM05D000366 ORTHO05D000437 1.4e-115 421.0 582 45.7
PSO017G6697 Papaver somniferum HOM05D000366 ORTHO05D000437 8.8e-113 411.8 596 44.5
PSO017G3777 Papaver somniferum HOM05D000366 ORTHO05D000437 1.0e-97 361.7 607 41.5
PSO063G6753 Papaver somniferum HOM05D000366 ORTHO05D000437 4.7e-90 336.3 626 38.3
PSO832G2218 Papaver somniferum HOM05D000366 ORTHO05D000437 2.6e-88 330.5 631 38.8
PSO478G1258 Papaver somniferum HOM05D000366 ORTHO05D000437 2.8e-74 283.9 496 39.1
PSO017G2435 Papaver somniferum HOM05D000366 ORTHO05D000437 4.7e-74 283.1 496 38.5
Lj2C1083G3 Lonicera japonica HOM05D000366 ORTHO05D000437 6.4e-63 246.1 511 33.5
QL01p038772 Quercus lobata HOM05D000366 ORTHO05D000437 1.6e-61 241.5 612 31.2
Manes.12G090700 Manihot esculenta HOM05D000366 ORTHO05D000437 6.0e-61 239.6 505 32.5
vmacro02952 Vaccinium macrocarpon HOM05D000366 ORTHO05D000437 1.7e-60 238.0 474 33.8
CSS0028830 Camellia sinensis var. sinensis HOM05D000366 ORTHO05D000437 6.8e-57 226.1 493 32.3
COL.COLO4_19189 Corchorus olitorius HOM05D000366 ORTHO05D000437 2.0e-56 224.6 569 30.6
Rhsim13G0068000 Rhododendron simsii HOM05D000366 ORTHO05D000437 3.4e-56 223.8 529 32.5
Peaxi162Scf00207g00633 Petunia axillaris HOM05D000366 ORTHO05D000437 7.5e-56 222.6 617 29.3
Lsat_1_v5_gn_5_173100 Lactuca sativa HOM05D000366 ORTHO05D000437 9.8e-56 222.2 480 33.1
TWI79G0902 Tripterygium wilfordii HOM05D000366 ORTHO05D000437 1.1e-54 218.8 583 31.4
FAN21G1554 Fragaria x ananassa HOM05D000366 ORTHO05D000437 7.1e-54 216.1 547 30.7
PGR102G2158 Punica granatum HOM05D000366 ORTHO05D000437 1.2e-53 215.3 502 33.5
Lj1C131G7 Lonicera japonica HOM05D000366 ORTHO05D000437 2.1e-53 214.5 516 31.2
Nitab4.5_0000719g0100 Nicotiana tabacum HOM05D000366 ORTHO05D000437 2.7e-53 214.2 547 30.0
FvH4_3g38930 Fragaria vesca HOM05D000366 ORTHO05D000437 3.5e-53 213.8 550 31.3
Ciclev10027689m.g Citrus clementina HOM05D000366 ORTHO05D000437 4.6e-53 213.4 609 29.1
FAN11G2311 Fragaria x ananassa HOM05D000366 ORTHO05D000437 6.0e-53 213.0 550 30.9
FAN25G2814 Fragaria x ananassa HOM05D000366 ORTHO05D000437 1.7e-52 211.5 543 31.5
Gorai.001G116700 Gossypium raimondii HOM05D000366 ORTHO05D000437 5.1e-52 209.9 616 29.5
CAN.G1023.1 Capsicum annuum HOM05D000366 ORTHO05D000437 6.6e-52 209.5 558 28.9
Gohir.D07G108600 Gossypium hirsutum HOM05D000366 ORTHO05D000437 6.6e-52 209.5 552 30.6
Sed0009073 Sechium edule HOM05D000366 ORTHO05D000437 1.1e-51 208.8 565 31.2
Cc01_g14390 Coffea canephora HOM05D000366 ORTHO05D000437 1.5e-51 208.4 522 30.5
RcHm_v2.0_Chr5g0070181 Rosa chinensis HOM05D000366 ORTHO05D000437 1.5e-51 208.4 511 31.3
Thecc.09G299000 Theobroma cacao HOM05D000366 ORTHO05D000437 1.5e-51 208.4 616 29.9
Nitab4.5_0000684g0160 Nicotiana tabacum HOM05D000366 ORTHO05D000437 3.3e-51 207.2 551 29.8
Gohir.A07G104600 Gossypium hirsutum HOM05D000366 ORTHO05D000437 3.6e-50 203.8 550 29.3
CiPaw.14G057900 Carya illinoinensis HOM05D000366 ORTHO05D000437 4.0e-49 200.3 385 33.8
HanXRQChr09g0261771 Helianthus annuus HOM05D000366 ORTHO05D000437 5.2e-49 199.9 483 30.2
Duzib168G1898 Durio zibethinus HOM05D000366 ORTHO05D000437 6.8e-49 199.5 605 28.3
Lsat_1_v5_gn_8_70821 Lactuca sativa HOM05D000366 ORTHO05D000437 1.5e-48 198.4 491 29.5
Cfa011718 Carpinus fangiana HOM05D000366 ORTHO05D000437 3.4e-48 197.2 709 28.6
Nitab4.5_0000839g0030 Nicotiana tabacum HOM05D000366 ORTHO05D000437 3.4e-48 197.2 599 28.0
Ca_26261_v3 Cicer arietinum L. HOM05D000366 ORTHO05D000437 4.4e-48 196.8 569 29.5
Migut.N00775 Erythranthe guttata HOM05D000366 ORTHO05D000437 5.8e-48 196.4 583 28.0
Aqoxy2G00854 Aquilegia oxysepala HOM05D000366 ORTHO05D000437 7.6e-48 196.1 566 29.2
Actinidia23227 Actinidia chinensis HOM05D000366 ORTHO05D000437 9.9e-48 195.7 514 31.7
Nitab4.5_0001371g0040 Nicotiana tabacum HOM05D000366 ORTHO05D000437 9.9e-48 195.7 567 29.3
TPR.G29027 Trifolium pratense HOM05D000366 ORTHO05D000437 9.9e-48 195.7 483 30.8
Haze_24352 Corylus avellana HOM05D000366 ORTHO05D000437 1.7e-47 194.9 696 28.0
DCAR_028604 Daucus carota HOM05D000366 ORTHO05D000437 1.7e-47 194.9 588 29.4
GSVIVG01024715001 Vitis vinifera HOM05D000366 ORTHO05D000437 2.2e-47 194.5 362 34.8
PGR119G0306 Punica granatum HOM05D000366 ORTHO05D000437 4.9e-47 193.4 376 35.1
Psat2g057000 Pisum sativum HOM05D000366 ORTHO05D000437 6.4e-47 193.0 484 31.0
arahy.Tifrunner.gnm1.ann1.C2LCIC Arachis hypogaea HOM05D000366 ORTHO05D000437 8.3e-47 192.6 601 28.0
Hund18838 Selenicereus undatus HOM05D000366 ORTHO05D000437 1.4e-46 191.8 581 28.9
arahy.Tifrunner.gnm1.ann1.E0FZPT Arachis hypogaea HOM05D000366 ORTHO05D000437 2.4e-46 191.0 606 28.2
BraA10t43668Z Brassica rapa HOM05D000366 ORTHO05D000223 3.2e-46 190.7 338 36.1
Glyma.02G227900 Glycine max HOM05D000366 ORTHO05D000437 3.2e-46 190.7 499 29.7
Glyma.14G194800 Glycine max HOM05D000366 ORTHO05D000437 3.2e-46 190.7 496 30.2
MD11G1071500 Malus domestica HOM05D000366 ORTHO05D000437 4.1e-46 190.3 631 26.8
PGSC0003DMG400022079 Solanum tuberosum HOM05D000366 ORTHO05D000437 4.1e-46 190.3 550 28.0
Sabra09G0054900 Salix brachista HOM05D000366 ORTHO05D000437 7.1e-46 189.5 490 29.4
Lalb_Chr17g0345161 Lupinus albus HOM05D000366 ORTHO05D000437 1.2e-45 188.7 493 30.4
SGA_v2.0_scaffold120G32900 Striga asiatica HOM05D000366 ORTHO05D000437 2.7e-45 187.6 678 27.3
Ca_14957_v3 Cicer arietinum L. HOM05D000366 ORTHO05D000437 3.5e-45 187.2 497 30.0
Thhalv10012519m.g Eutrema salsugineum HOM05D000366 ORTHO05D000437 3.5e-45 187.2 352 34.7
TPR.G27813 Trifolium pratense HOM05D000366 ORTHO05D000437 3.5e-45 187.2 505 30.9
Hund20988 Selenicereus undatus HOM05D000366 ORTHO05D000437 4.6e-45 186.8 529 29.1
CiPaw.13G075600 Carya illinoinensis HOM05D000366 ORTHO05D000437 6.0e-45 186.4 388 33.8
Prupe.6G055100 Prunus persica HOM05D000366 ORTHO05D000437 6.0e-45 186.4 620 28.1
Nn2g13155 Nelumbo nucifera HOM05D000366 ORTHO05D000437 7.8e-45 186.0 735 25.4
A10p15650 Brassica napus HOM05D000366 ORTHO05D000223 1.0e-44 185.7 333 35.7
BolC9t57918H Brassica oleracea HOM05D000366 ORTHO05D000437 1.0e-44 185.7 327 36.7
MBI03_g07315_MAGBIO Magnolia biondii HOM05D000366 ORTHO05D000437 1.0e-44 185.7 542 30.1
Dinv28657 Davidia involucrata HOM05D000366 ORTHO05D000437 1.7e-44 184.9 458 30.8
CsaV3_6G016100 Cucumis sativus L. HOM05D000366 ORTHO05D000437 3.9e-44 183.7 533 30.0
Aa31LG11G390 Aethionema arabicum HOM05D000366 ORTHO05D000437 6.6e-44 183.0 358 36.0
Solyc09g031580.3 Solanum lycopersicum HOM05D000366 ORTHO05D000437 1.1e-43 182.2 542 26.8
Actinidia32638 Actinidia chinensis HOM05D000366 ORTHO05D000437 5.6e-43 179.9 187 47.6
CANSAT54G2633 Cannabis sativa HOM05D000366 ORTHO05D000437 9.6e-43 179.1 702 26.6
ECA236G5035 Erigeron canadensis HOM05D000366 ORTHO05D000437 1.6e-42 178.3 491 27.7
Lalb_Chr15g0082981 Lupinus albus HOM05D000366 ORTHO05D000437 1.6e-42 178.3 535 29.3
Potri.009G072600 Populus trichocarpa HOM05D000366 ORTHO05D000437 1.6e-42 178.3 613 27.2
unitig_60.g25553 Utricularia gibba HOM05D000366 ORTHO05D000437 1.6e-42 178.3 621 27.7
VMungo0540G1355 Vigna mungo HOM05D000366 ORTHO05D000437 1.6e-42 178.3 524 30.9
DCAR_007366 Daucus carota HOM05D000366 ORTHO05D000437 2.8e-42 177.6 514 29.0
AT5G58610 Arabidopsis thaliana HOM05D000366 ORTHO05D000437 4.7e-42 176.8 356 31.7
Glyma.11G171200 Glycine max HOM05D000366 ORTHO05D000437 6.2e-42 176.4 476 30.5
AL8G34880 Arabidopsis lyrata HOM05D000366 ORTHO05D000437 8.1e-42 176.0 351 33.0
Ah.01g021980 Amaranthus hybridus HOM05D000366 ORTHO05D000437 1.1e-41 175.6 522 29.5
arahy.Tifrunner.gnm1.ann1.J886VA Arachis hypogaea HOM05D000366 ORTHO05D000437 1.4e-41 175.3 539 28.4
Medtr5g071340 Medicago truncatula HOM05D000366 ORTHO05D000437 1.8e-41 174.9 514 28.4
Cpa.g.sc2.437 Carica papaya HOM05D000366 ORTHO05D000437 4.0e-41 173.7 223 39.9
AUR62001624 Chenopodium quinoa HOM05D000366 ORTHO05D000437 4.0e-41 173.7 508 30.1
RcHm_v2.0_Chr7g0224411 Rosa chinensis HOM05D000366 ORTHO05D000437 4.0e-41 173.7 158 51.9
Sc21g0006460 Simmondsia chinensis HOM05D000366 ORTHO05D000437 4.0e-41 173.7 432 30.6
Dinv03096 Davidia involucrata HOM05D000366 ORTHO05D000437 8.9e-41 172.6 393 34.4
HanXRQChr08g0214041 Helianthus annuus HOM05D000366 ORTHO05D000437 8.9e-41 172.6 168 45.8
EL10Ac7g16192 Beta vulgaris HOM05D000366 ORTHO05D000437 1.2e-40 172.2 584 27.6
C09p50690 Brassica napus HOM05D000366 ORTHO05D000437 1.2e-40 172.2 315 35.2
ECA248G0431 Erigeron canadensis HOM05D000366 ORTHO05D000437 1.2e-40 172.2 356 31.5
Sopen09g013940 Solanum pennellii HOM05D000366 ORTHO05D000437 4.4e-40 170.2 534 26.8
Atru.chr3.4188 Acer truncatum HOM05D000366 ORTHO05D000437 7.6e-40 169.5 370 33.8
Atru.chr3.4178 Acer truncatum HOM05D000043 ORTHO05D000437 9.9e-40 169.1 370 33.8
Carub.0008s1923 Capsella rubella HOM05D000366 ORTHO05D000437 1.7e-39 168.3 345 32.5
Phvul.006G069100 Phaseolus vulgaris HOM05D000366 ORTHO05D000437 1.7e-39 168.3 188 43.6
Medtr3g464550 Medicago truncatula HOM05D000366 ORTHO05D000437 2.2e-39 167.9 566 28.1
Nn2g10878 Nelumbo nucifera HOM05D000366 ORTHO05D000437 6.4e-39 166.4 172 44.2
HPP92_023745 Vanilla planifolia HOM05D000366 ORTHO05D000437 1.1e-38 165.6 152 45.4
THA.LOC104810704 Tarenaya hassleriana HOM05D000366 ORTHO05D000437 1.9e-38 164.9 354 31.4
AUR62020153 Chenopodium quinoa HOM05D000366 ORTHO05D000437 2.4e-38 164.5 615 28.5
Psat5g152800 Pisum sativum HOM05D000366 ORTHO05D000437 2.4e-38 164.5 634 26.3
DCAR_004481 Daucus carota HOM05D000366 ORTHO05D000437 1.2e-37 162.2 149 49.7
THA.LOC104815060 Tarenaya hassleriana HOM05D000366 ORTHO05D000437 1.2e-37 162.2 155 47.7
Aqoxy4G02520 Aquilegia oxysepala HOM05D000366 ORTHO05D000437 3.5e-37 160.6 158 45.6
ClCG02G019470 Citrullus lanatus HOM05D000366 ORTHO05D000437 1.0e-36 159.1 706 25.1
MELO3C035107.2 Cucumis melo HOM05D000366 ORTHO05D000437 1.0e-36 159.1 158 47.5
ECA247G0378 Erigeron canadensis HOM05D000366 ORTHO05D000437 1.3e-36 158.7 342 29.8
arahy.Tifrunner.gnm1.ann1.297ZDF Arachis hypogaea HOM05D000366 ORTHO05D000437 3.9e-36 157.1 146 48.6
arahy.Tifrunner.gnm1.ann1.BVBE6Z Arachis hypogaea HOM05D000366 ORTHO05D000437 3.9e-36 157.1 146 48.6
Lalb_Chr22g0361321 Lupinus albus HOM05D000366 ORTHO05D000437 3.9e-36 157.1 220 37.3
arahy.Tifrunner.gnm1.ann1.S706JK Arachis hypogaea HOM05D000366 ORTHO05D000437 6.6e-36 156.4 398 29.4
VMungo0647G2119 Vigna mungo HOM05D000366 ORTHO05D000437 1.5e-35 155.2 337 30.3
Eucgr.J01892 Eucalyptus grandis HOM05D000366 ORTHO05D000437 1.9e-35 154.8 526 27.4
Solyc06g082040.2 Solanum lycopersicum HOM05D000366 ORTHO05D000437 1.9e-35 154.8 153 43.8
Sopen06g033450 Solanum pennellii HOM05D000366 ORTHO05D000437 3.3e-35 154.1 153 43.8
CAN.G394.137 Capsicum annuum HOM05D000366 ORTHO05D000437 4.3e-35 153.7 145 43.4
Glyma.11G170900 Glycine max HOM05D000366 ORTHO05D000437 5.6e-35 153.3 217 42.4
Nn5g28474 Nelumbo nucifera HOM05D000366 ORTHO05D000437 7.3e-35 152.9 181 39.8
LjContig00141g0006273 Lotus japonicus HOM05D000366 ORTHO05D000437 2.8e-34 151.0 159 45.9
AUR62006847 Chenopodium quinoa HOM05D000366 ORTHO05D000437 3.1e-33 147.5 145 44.8
Medtr4g027030 Medicago truncatula HOM05D000366 ORTHO05D000437 4.0e-33 147.1 144 47.2
Zm00001eb013420 Zea mays HOM05D000366 ORTHO05D000437 6.9e-33 146.4 577 26.0
ATR0594G012 Amborella trichopoda HOM05D000366 ORTHO05D000437 1.2e-32 145.6 390 29.2
Peaxi162Scf00540g00214 Petunia axillaris HOM05D000366 ORTHO05D000437 1.2e-32 145.6 113 54.0
AUR62000501 Chenopodium quinoa HOM05D000366 ORTHO05D000437 1.5e-32 145.2 145 44.1
Eucgr.I00172 Eucalyptus grandis HOM05D000366 ORTHO05D000437 1.5e-32 145.2 143 45.5
BcaC04g19822 Brassica carinata HOM05D000366 ORTHO05D000437 2.0e-32 144.8 111 57.7
Ah.10g029430 Amaranthus hybridus HOM05D000366 ORTHO05D000437 3.8e-31 140.6 159 42.8
EL10Ac4g09606 Beta vulgaris HOM05D000366 ORTHO05D000437 4.9e-31 140.2 144 43.8
Sc09g0002310 Simmondsia chinensis HOM05D000366 ORTHO05D000437 4.9e-31 140.2 145 44.1
Thecc.01G136100 Theobroma cacao HOM05D000366 ORTHO05D000437 3.2e-30 137.5 141 44.7
VMungo0251G0507 Vigna mungo HOM05D000366 ORTHO05D000437 4.2e-30 137.1 241 36.1
Gohir.A10G157200 Gossypium hirsutum HOM05D000366 ORTHO05D000437 5.4e-30 136.7 141 44.7
Ah.06g190920 Amaranthus hybridus HOM05D000366 ORTHO05D000437 7.1e-30 136.3 144 43.8
Gohir.D10G108300 Gossypium hirsutum HOM05D000366 ORTHO05D000437 7.1e-30 136.3 133 46.6
Gorai.011G118800 Gossypium raimondii HOM05D000366 ORTHO05D000437 7.1e-30 136.3 133 46.6
Manes.13G084500 Manihot esculenta HOM05D000366 ORTHO05D000437 9.3e-30 136.0 232 34.5
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 1.2e-29 135.6 141 44.0
Duzib264G1239 Durio zibethinus HOM05D000366 ORTHO05D000437 1.6e-29 135.2 253 32.8
Hund07250 Selenicereus undatus HOM05D000366 ORTHO05D000437 2.7e-29 134.4 143 43.4
TAR628G0036 Trochodendron aralioides HOM05D000366 ORTHO05D000437 1.0e-28 132.5 143 43.4
SEGI_22566 Sequoiadendron giganteum HOM05D000366 ORTHO05D000437 3.0e-28 131.0 208 36.1
CARHR272470 Cardamine hirsuta HOM05D000366 ORTHO05D000437 1.9e-27 128.3 104 51.9
ATR0051G058 Amborella trichopoda HOM05D000366 ORTHO05D000437 3.3e-27 127.5 526 25.3
Lj6g0002719 Lotus japonicus HOM05D000366 ORTHO05D000437 1.6e-26 125.2 478 28.2
Potri.002G118600 Populus trichocarpa HOM05D000366 ORTHO05D000437 8.1e-26 122.9 338 28.7
Sabra02G0093100 Salix brachista HOM05D000366 ORTHO05D000437 4.0e-25 120.6 355 29.0
PGR119G1519 Punica granatum HOM05D000366 ORTHO05D000437 4.5e-24 117.1 298 26.8
CSS0023782 Camellia sinensis var. sinensis HOM05D000366 ORTHO05D000437 5.8e-24 116.7 251 29.9
CSS0024592 Camellia sinensis var. sinensis HOM05D000366 ORTHO05D000437 5.8e-24 116.7 251 29.9
ATR1131G024 Amborella trichopoda HOM05D000366 ORTHO05D000437 4.9e-23 113.6 160 36.9
FvH4_6g26070 Fragaria vesca HOM05D000366 ORTHO05D000437 4.9e-23 113.6 107 49.5
RcHm_v2.0_Chr7g0222811 Rosa chinensis HOM05D000366 ORTHO05D000437 6.4e-23 113.2 112 49.1
SEGI_26709 Sequoiadendron giganteum HOM05D000366 ORTHO05D000437 1.8e-20 105.1 145 38.6
ATR0661G075 Amborella trichopoda HOM05D050051 ORTHO05D038298 3.7e-18 97.4 156 32.1
TAR623G0601 Trochodendron aralioides HOM05D000366 ORTHO05D000437 2.1e-13 81.6 355 26.8
Solyc03g071550.3 Solanum lycopersicum HOM05D000366 ORTHO05D000437 1.3e-10 72.4 319 24.5
Sopen03g019830 Solanum pennellii HOM05D000366 ORTHO05D000437 2.1e-10 71.6 318 23.3
Lj1C134T19 Lonicera japonica HOM05D000366 ORTHO05D000437 2.8e-10 71.2 334 22.8
MBI15_g11762_MAGBIO Magnolia biondii HOM05D000366 ORTHO05D000437 4.1e-09 67.4 240 27.9
SEGI_29318 Sequoiadendron giganteum HOM05D000366 ORTHO05D000437 2.9e-07 61.2 68 42.6
Atru.chr13.829 Acer truncatum HOM05D000366 ORTHO05D000437 8.4e-07 59.7 237 29.5
PGSC0003DMG400016917 Solanum tuberosum HOM05D000366 ORTHO05D000437 8.4e-07 59.7 432 25.0
CBR_g48679 Chara braunii HOM05D000366 ORTHO05D000437 1.4e-06 58.9 81 37.0
Mapoly0091s0046 Marchantia polymorpha HOM05D000366 ORTHO05D000437 3.2e-06 57.8 86 37.2
MBI16_g21727_MAGBIO Magnolia biondii HOM05D000366 ORTHO05D000437 5.5e-06 57.0 271 24.0
Mapoly0091s0090 Marchantia polymorpha HOM05D003141 ORTHO05D000437 7.1e-06 56.6 70 41.4


User provided reference genes

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