Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G4293 Papaver somniferum HOM05D003921 ORTHO05D004394 1.5e-146 523.1 312 100.0
PSO478G1412 Papaver somniferum HOM05D003921 ORTHO05D004394 7.9e-140 500.7 312 97.4
Cpa.g.sc3.273 Carica papaya HOM05D003921 ORTHO05D004394 9.2e-80 301.2 294 58.8
Hma1.2p1_0654F.1_g196410 Hydrangea macrophylla HOM05D003921 ORTHO05D004394 8.6e-78 294.7 301 56.5
Haze_17961 Corylus avellana HOM05D003921 ORTHO05D004394 2.1e-76 290.0 294 57.1
Cfa018157 Carpinus fangiana HOM05D003921 ORTHO05D004394 8.0e-76 288.1 294 56.8
Glyma.20G233800 Glycine max HOM05D003921 ORTHO05D004394 1.0e-75 287.7 287 64.5
TPR.G27266 Trifolium pratense HOM05D003921 ORTHO05D004394 1.8e-75 287.0 290 66.6
TPR.G19495 Trifolium pratense HOM05D002828 ORTHO05D003457 5.2e-75 285.4 288 68.4
Dinv22928 Davidia involucrata HOM05D003921 ORTHO05D004394 4.4e-74 282.3 262 59.2
MBI05_g15474_MAGBIO Magnolia biondii HOM05D003921 ORTHO05D004394 4.4e-74 282.3 275 58.5
vmacro18851 Vaccinium macrocarpon HOM05D003921 ORTHO05D004394 2.2e-73 280.0 294 55.8
Phvul.007G180200 Phaseolus vulgaris HOM05D003921 ORTHO05D004394 2.9e-73 279.6 289 67.5
arahy.Tifrunner.gnm1.ann1.HSUB65 Arachis hypogaea HOM05D003921 ORTHO05D004394 3.7e-73 279.3 296 58.1
Rhsim11G0028600 Rhododendron simsii HOM05D003921 ORTHO05D004394 3.7e-73 279.3 289 57.1
TAR626G1747 Trochodendron aralioides HOM05D003921 ORTHO05D004394 1.1e-72 277.7 288 66.0
CiPaw.15G078700 Carya illinoinensis HOM05D003921 ORTHO05D004394 2.4e-72 276.6 310 62.6
Ca_20760_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 2.4e-72 276.6 289 66.4
Phvul.007G264700 Phaseolus vulgaris HOM05D003921 ORTHO05D004394 4.1e-72 275.8 289 66.8
Aqoxy1G01610 Aquilegia oxysepala HOM05D003921 ORTHO05D004394 7.0e-72 275.0 288 60.1
Ca_31306_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 2.7e-71 273.1 288 66.3
CDE07G0272 Ceratophyllum demersum HOM05D003921 ORTHO05D004394 3.5e-71 272.7 293 55.6
COL.COLO4_14179 Corchorus olitorius HOM05D003921 ORTHO05D004394 3.5e-71 272.7 309 57.0
Gohir.A07G039500 Gossypium hirsutum HOM05D003921 ORTHO05D004394 5.9e-71 271.9 293 53.6
Potri.015G131200 Populus trichocarpa HOM05D003921 ORTHO05D004394 7.8e-71 271.6 302 53.6
Thecc.03G161300 Theobroma cacao HOM05D003921 ORTHO05D004394 1.3e-70 270.8 310 52.6
Migut.J00413 Erythranthe guttata HOM05D003921 ORTHO05D004394 3.0e-70 269.6 283 54.8
VMungo0720G1998 Vigna mungo HOM05D003921 ORTHO05D004394 3.0e-70 269.6 262 67.2
Lalb_Chr10g0096111 Lupinus albus HOM05D003921 ORTHO05D004394 5.0e-70 268.9 301 54.2
Gorai.001G046600 Gossypium raimondii HOM05D003921 ORTHO05D004394 1.1e-69 267.7 297 54.5
Gohir.D07G043600 Gossypium hirsutum HOM05D003921 ORTHO05D004394 1.5e-69 267.3 297 54.5
Cc02_g03920 Coffea canephora HOM05D003921 ORTHO05D004394 1.9e-69 266.9 282 63.1
Nitab4.5_0005477g0070 Nicotiana tabacum HOM05D003921 ORTHO05D004394 4.3e-69 265.8 296 59.8
Solyc01g006090.3 Solanum lycopersicum HOM05D003921 ORTHO05D004394 5.6e-69 265.4 281 54.8
Lj3g0006890 Lotus japonicus HOM05D003921 ORTHO05D004394 1.6e-68 263.8 290 57.6
Rhsim07G0193400 Rhododendron simsii HOM05D003921 ORTHO05D004394 1.6e-68 263.8 248 58.5
CSS0011813 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 2.1e-68 263.5 313 58.5
Solyc01g006170.4 Solanum lycopersicum HOM05D003921 ORTHO05D004394 4.7e-68 262.3 286 53.5
PGSC0003DMG400032192 Solanum tuberosum HOM05D003921 ORTHO05D004394 6.2e-68 261.9 286 53.8
PGR042G0045 Punica granatum HOM05D003921 ORTHO05D004394 8.0e-68 261.5 310 56.5
Glyma.10G154500 Glycine max HOM05D003921 ORTHO05D004394 1.4e-67 260.8 287 57.5
Medtr5g028350 Medicago truncatula HOM05D003921 ORTHO05D004394 1.4e-67 260.8 287 65.9
Nitab4.5_0001620g0040 Nicotiana tabacum HOM05D003921 ORTHO05D004394 1.4e-67 260.8 267 61.8
MD01G1185600 Malus domestica HOM05D003921 ORTHO05D004394 4.0e-67 259.2 289 64.4
Sopen01g002180 Solanum pennellii HOM05D003921 ORTHO05D004394 4.0e-67 259.2 295 52.2
Manes.06G137800 Manihot esculenta HOM05D003921 ORTHO05D004394 8.9e-67 258.1 294 50.7
PGSC0003DMG400032141 Solanum tuberosum HOM05D003921 ORTHO05D004394 1.2e-66 257.7 286 53.1
SGA_v2.0_scaffold126G33894 Striga asiatica HOM05D003921 ORTHO05D004394 1.2e-66 257.7 281 60.5
BraA01t03380Z Brassica rapa HOM05D003921 ORTHO05D004394 1.5e-66 257.3 300 53.0
MD07G1257700 Malus domestica HOM05D003921 ORTHO05D004394 2.0e-66 256.9 286 65.0
A01p32500 Brassica napus HOM05D003921 ORTHO05D004394 2.6e-66 256.5 300 52.7
QL02p008779 Quercus lobata HOM05D003921 ORTHO05D004394 2.6e-66 256.5 291 56.0
TAR636G2246 Trochodendron aralioides HOM05D003921 ORTHO05D004394 2.6e-66 256.5 310 51.3
ATR0626G386 Amborella trichopoda HOM05D003921 ORTHO05D004394 4.4e-66 255.8 281 55.2
Sed0026547 Sechium edule HOM05D003921 ORTHO05D004394 5.8e-66 255.4 265 62.6
ECA234G0656 Erigeron canadensis HOM05D003921 ORTHO05D004394 7.5e-66 255.0 288 54.5
RcHm_v2.0_Chr1g0375101 Rosa chinensis HOM05D003921 ORTHO05D004394 7.5e-66 255.0 266 56.8
ClCG01G005120 Citrullus lanatus HOM05D003921 ORTHO05D004394 9.8e-66 254.6 263 60.1
Ciclev10005521m.g Citrus clementina HOM05D003921 ORTHO05D004394 1.3e-65 254.2 262 53.8
Prupe.2G282000 Prunus persica HOM05D003921 ORTHO05D004394 2.2e-65 253.4 294 61.6
HanXRQChr08g0224051 Helianthus annuus HOM05D003921 ORTHO05D004394 3.7e-65 252.7 287 55.4
Atru.chr1.637 Acer truncatum HOM05D003921 ORTHO05D004394 6.4e-65 251.9 294 55.4
Aa31LG5G22190 Aethionema arabicum HOM05D003921 ORTHO05D004394 6.4e-65 251.9 302 50.7
AT3G22660 Arabidopsis thaliana HOM05D003921 ORTHO05D004394 6.4e-65 251.9 264 56.1
Carub.0003s2281 Capsella rubella HOM05D003921 ORTHO05D004394 6.4e-65 251.9 301 53.5
CSS0049059 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 1.1e-64 251.1 266 56.8
Lsat_1_v5_gn_6_96180 Lactuca sativa HOM05D003921 ORTHO05D004394 1.1e-64 251.1 260 56.9
TWI14G0513 Tripterygium wilfordii HOM05D003921 ORTHO05D004394 1.4e-64 250.8 293 53.2
Lalb_Chr06g0167921 Lupinus albus HOM05D003921 ORTHO05D004394 2.4e-64 250.0 289 56.1
Sed0011284 Sechium edule HOM05D003921 ORTHO05D004394 3.2e-64 249.6 311 54.0
unitig_744.g24672 Utricularia gibba HOM05D003921 ORTHO05D004394 5.4e-64 248.8 286 57.7
A05p26040 Brassica napus HOM05D003921 ORTHO05D004394 7.0e-64 248.4 301 54.2
BraA03t13433Z Brassica rapa HOM05D003921 ORTHO05D004394 7.0e-64 248.4 295 54.6
FvH4_7g28160 Fragaria vesca HOM05D003921 ORTHO05D004394 9.2e-64 248.1 266 57.9
BcaC05g28029 Brassica carinata HOM05D003921 ORTHO05D004394 1.2e-63 247.7 300 62.7
FAN06G4038 Fragaria x ananassa HOM05D003921 ORTHO05D004394 1.2e-63 247.7 264 57.6
BcaB04g20506 Brassica carinata HOM05D003921 ORTHO05D004394 1.6e-63 247.3 271 55.0
BraA05t21488Z Brassica rapa HOM05D003921 ORTHO05D004394 1.6e-63 247.3 294 54.8
BcaC09g49188 Brassica carinata HOM05D003921 ORTHO05D004394 2.7e-63 246.5 301 52.2
C01p41660 Brassica napus HOM05D003921 ORTHO05D004394 2.7e-63 246.5 301 52.2
BolC1t04121H Brassica oleracea HOM05D003921 ORTHO05D004394 2.7e-63 246.5 301 52.2
BcaC01g03432 Brassica carinata HOM05D003921 ORTHO05D004394 3.5e-63 246.1 273 55.3
BcaB06g26378 Brassica carinata HOM05D003921 ORTHO05D004394 4.6e-63 245.7 300 54.3
BolC5t32786H Brassica oleracea HOM05D003921 ORTHO05D004394 4.6e-63 245.7 300 62.3
Thhalv10021245m.g Eutrema salsugineum HOM05D003921 ORTHO05D004394 6.0e-63 245.4 304 53.3
DCAR_020219 Daucus carota HOM05D003921 ORTHO05D004394 1.0e-62 244.6 317 52.1
BolC3t17533H Brassica oleracea HOM05D003921 ORTHO05D004394 1.7e-62 243.8 267 56.9
Aa31LG5G22200 Aethionema arabicum HOM05D003921 ORTHO05D004394 2.3e-62 243.4 302 49.7
TWI23G0331 Tripterygium wilfordii HOM05D003921 ORTHO05D004394 3.0e-62 243.0 310 51.3
C03p52650 Brassica napus HOM05D003921 ORTHO05D004394 3.9e-62 242.7 267 55.4
FAN03G1144 Fragaria x ananassa HOM05D003921 ORTHO05D004394 3.9e-62 242.7 255 58.8
A03p42870 Brassica napus HOM05D003921 ORTHO05D004394 5.0e-62 242.3 294 53.1
HanXRQChr05g0141401 Helianthus annuus HOM05D003921 ORTHO05D004394 8.6e-62 241.5 286 53.8
CARHR098540 Cardamine hirsuta HOM05D003921 ORTHO05D004394 1.9e-61 240.4 301 62.1
FAN01G0440 Fragaria x ananassa HOM05D003921 ORTHO05D004394 3.3e-61 239.6 247 59.5
FAN10G0634 Fragaria x ananassa HOM05D003921 ORTHO05D004394 4.3e-61 239.2 247 59.5
Duzib084G0641 Durio zibethinus HOM05D003921 ORTHO05D004394 5.6e-61 238.8 307 49.5
AL3G36960 Arabidopsis lyrata HOM05D003921 ORTHO05D004394 9.5e-61 238.0 304 51.6
FAN06G2146 Fragaria x ananassa HOM05D003921 ORTHO05D004394 9.5e-61 238.0 247 59.1
BcaB04g19210 Brassica carinata HOM05D003921 ORTHO05D004394 1.6e-60 237.3 264 55.3
FAN03G3435 Fragaria x ananassa HOM05D003921 ORTHO05D004394 1.6e-60 237.3 247 59.1
CsaV3_5G005400 Cucumis sativus L. HOM05D003921 ORTHO05D004394 2.1e-60 236.9 316 50.6
MELO3C005417.2 Cucumis melo HOM05D003921 ORTHO05D004394 2.8e-60 236.5 304 50.7
Eucgr.E01709 Eucalyptus grandis HOM05D003921 ORTHO05D004394 8.1e-60 235.0 264 50.4
Medtr8g075400 Medicago truncatula HOM05D003921 ORTHO05D004394 2.3e-59 233.4 292 61.6
Sc03g0002240 Simmondsia chinensis HOM05D003921 ORTHO05D004394 4.0e-59 232.6 309 47.9
Psat2g139240 Pisum sativum HOM05D003921 ORTHO05D004394 8.9e-59 231.5 289 63.0
Lj1P984T37 Lonicera japonica HOM05D003921 ORTHO05D004394 1.2e-58 231.1 262 50.8
Sp3g20420 Schrenkiella parvula HOM05D003921 ORTHO05D004394 1.5e-58 230.7 299 49.5
Zm00001eb235000 Zea mays HOM05D003921 ORTHO05D004394 4.4e-58 229.2 297 54.9
Peaxi162Scf00441g00013 Petunia axillaris HOM05D003921 ORTHO05D004394 9.8e-58 228.0 287 49.8
CANSAT11G2317 Cannabis sativa HOM05D003921 ORTHO05D004394 1.7e-57 227.3 255 52.2
CAN.G140.50 Capsicum annuum HOM05D003921 ORTHO05D004394 1.7e-57 227.3 292 56.5
CSS0023430 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 3.7e-57 226.1 260 53.1
AUR62000393 Chenopodium quinoa HOM05D003921 ORTHO05D004394 4.9e-57 225.7 306 48.0
ECA233G5254 Erigeron canadensis HOM05D003921 ORTHO05D004394 5.4e-56 222.2 239 56.9
Rhsim11G0028700 Rhododendron simsii HOM05D003921 ORTHO05D004394 7.1e-56 221.9 282 50.7
Zm00001eb104900 Zea mays HOM05D003921 ORTHO05D004394 9.2e-56 221.5 259 55.6
EL10Ac4g09457 Beta vulgaris HOM05D003921 ORTHO05D004394 2.1e-55 220.3 303 46.2
Lalb_Chr17g0338581 Lupinus albus HOM05D003921 ORTHO05D004394 2.7e-55 219.9 291 48.5
THA.LOC104808294 Tarenaya hassleriana HOM05D003921 ORTHO05D004394 7.8e-55 218.4 298 46.6
Ah.06g188120 Amaranthus hybridus HOM05D003921 ORTHO05D004394 1.0e-54 218.0 297 52.5
AUR62006749 Chenopodium quinoa HOM05D003921 ORTHO05D004394 1.0e-54 218.0 306 51.6
Ciclev10006627m.g Citrus clementina HOM05D003921 ORTHO05D004394 1.0e-54 218.0 277 55.2
Dinv22984 Davidia involucrata HOM05D003921 ORTHO05D004394 1.3e-54 217.6 287 47.0
Ah.06g188100 Amaranthus hybridus HOM05D003921 ORTHO05D004394 6.6e-54 215.3 291 51.9
Ca_25165_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 5.6e-53 212.2 289 58.5
Ah.06g188150 Amaranthus hybridus HOM05D003921 ORTHO05D004394 1.8e-51 207.2 288 50.7
Os07g0475800 Oryza sativa ssp. japonica HOM05D003921 ORTHO05D004394 1.8e-51 207.2 266 53.4
Nitab4.5_0000249g0460 Nicotiana tabacum HOM05D003921 ORTHO05D004394 1.3e-49 201.1 281 47.7
FAN10G0556 Fragaria x ananassa HOM05D003921 ORTHO05D004394 2.1e-47 193.7 190 60.5
Oeu019922.1 Olea europaea HOM05D003921 ORTHO05D004394 3.0e-46 189.9 247 57.9
CDE04G0151 Ceratophyllum demersum HOM05D003921 ORTHO05D004394 2.8e-44 183.3 202 57.9
SHI13875 Sapria himalayana HOM05D003921 ORTHO05D004394 2.0e-42 177.2 274 48.9
SMO174G0035 Selaginella moellendorffii HOM05D003921 ORTHO05D004394 3.4e-42 176.4 259 44.0
Sopen01g002090 Solanum pennellii HOM05D003921 ORTHO05D004394 5.8e-42 175.6 212 50.9
Ca_27419_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 2.4e-40 170.2 186 71.0
Pp3c6_25210 Physcomitrium patens HOM05D003921 ORTHO05D004394 4.2e-40 169.5 274 43.1
Nitab4.5_0004389g0020 Nicotiana tabacum HOM05D003921 ORTHO05D004394 3.0e-38 163.3 299 41.8
BcaC09g49189 Brassica carinata HOM05D003921 ORTHO05D004394 3.6e-36 156.4 189 61.9
Oeu019920.1 Olea europaea HOM05D003921 ORTHO05D004394 8.1e-36 155.2 309 48.9
MSTRG.14093 Avicennia marina HOM05D003921 ORTHO05D004394 6.9e-35 152.1 166 65.7
HPP92_008700 Vanilla planifolia HOM05D003921 ORTHO05D004394 4.5e-34 149.4 131 59.5
Nn1g08099 Nelumbo nucifera HOM05D003921 ORTHO05D004394 1.3e-33 147.9 123 61.8
Mapoly0140s0011 Marchantia polymorpha HOM05D003921 ORTHO05D004394 5.4e-32 142.5 276 38.4
Ah.06g188070 Amaranthus hybridus HOM05D003921 ORTHO05D004394 1.8e-30 137.5 187 52.9
MSTRG.5717 Avicennia marina HOM05D003921 ORTHO05D004394 2.5e-29 133.7 188 56.4
AagrBONN_evm.TU.Sc2ySwM_228.1082 Anthoceros agrestis HOM05D003921 ORTHO05D004394 9.6e-29 131.7 287 35.2
Nn1g01220 Nelumbo nucifera HOM05D003921 ORTHO05D004394 9.6e-29 131.7 123 56.9
Oeu023230.1 Olea europaea HOM05D003921 ORTHO05D004394 6.2e-28 129.0 284 36.3
CBR_g18581 Chara braunii HOM05D001161 ORTHO05D000497 8.1e-28 128.6 262 40.1
DCAR_018123 Daucus carota HOM05D003921 ORTHO05D004394 1.4e-27 127.9 292 41.8
Hund09280 Selenicereus undatus HOM05D003921 ORTHO05D004394 6.9e-27 125.6 172 48.3
Hund09282 Selenicereus undatus HOM05D003921 ORTHO05D004394 6.9e-27 125.6 172 48.3
Oeu021724.1 Olea europaea HOM05D003921 ORTHO05D004394 2.0e-26 124.0 284 36.3
Eucgr.K01460 Eucalyptus grandis HOM05D003921 ORTHO05D004394 5.8e-26 122.5 132 50.8
MSTRG.14095 Avicennia marina HOM05D003921 ORTHO05D004394 1.3e-25 121.3 133 54.1
PRCOL_00003036 Prasinoderma coloniale HOM05D003921 ORTHO05D004394 1.7e-25 120.9 256 33.2
RcHm_v2.0_Chr5g0027461 Rosa chinensis HOM05D003921 ORTHO05D017011 1.7e-25 120.9 112 55.4
GSVIVG01018514001 Vitis vinifera HOM05D003921 ORTHO05D004394 2.1e-23 114.0 298 31.5
Actinidia31394 Actinidia chinensis HOM05D003921 ORTHO05D004394 1.3e-22 111.3 83 72.3
MCO16G303 Micromonas commoda HOM05D003921 ORTHO05D004394 5.3e-19 99.4 212 34.4
Nn4g26407 Nelumbo nucifera HOM05D003921 ORTHO05D004394 3.4e-18 96.7 109 51.4
Cre07.g351750 Chlamydomonas reinhardtii HOM05D003921 ORTHO05D004394 4.5e-18 96.3 243 32.1
Actinidia25037 Actinidia chinensis HOM05D003921 ORTHO05D004394 1.7e-17 94.4 83 57.8
Ca_29708_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 1.4e-16 91.3 88 61.4
ATR0564G120 Amborella trichopoda HOM05D003921 ORTHO05D004394 4.2e-16 89.7 198 36.4
Actinidia39598 Actinidia chinensis HOM05D003921 ORTHO05D004394 2.1e-15 87.4 82 53.7
Nn4g26401 Nelumbo nucifera HOM05D003921 ORTHO05D004394 1.3e-14 84.7 66 63.6
Ah.06g188080 Amaranthus hybridus HOM05D003921 ORTHO05D004394 6.7e-14 82.4 92 54.3
Prupe.2G115300 Prunus persica HOM05D003921 ORTHO05D004394 4.3e-13 79.7 127 43.3
Ah.06g188140 Amaranthus hybridus HOM05D003921 ORTHO05D004394 3.7e-12 76.6 127 45.7
Gohir.D12G264333 Gossypium hirsutum HOM05D003921 ORTHO05D004394 8.2e-12 75.5 248 29.8
Actinidia13554 Actinidia chinensis HOM05D003921 ORTHO05D004394 1.8e-11 74.3 56 60.7
Gorai.008G283700 Gossypium raimondii HOM05D003921 ORTHO05D004394 5.0e-09 66.2 276 28.6
Oeu039213.1 Olea europaea HOM05D003921 ORTHO05D004394 6.5e-09 65.9 75 54.7
FvH4_1g22470 Fragaria vesca HOM05D003475 ORTHO05D035452 2.7e-07 60.5 54 57.4
DCAR_013591 Daucus carota HOM05D003921 ORTHO05D004394 2.3e-06 57.4 105 41.9
Dinv10307 Davidia involucrata HOM05D003921 ORTHO05D004394 3.0e-06 57.0 36 72.2
Prupe.2G115400 Prunus persica HOM05D003921 ORTHO05D004394 3.9e-06 56.6 57 54.4


User provided reference genes

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