Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 5.2e-273 943.7 463 100.0
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 1.0e-268 929.5 463 98.5
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 3.7e-186 655.2 428 72.9
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 1.8e-185 652.9 417 73.4
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 2.0e-184 649.4 428 70.8
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 4.5e-184 648.3 440 69.8
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 1.7e-183 646.4 435 69.0
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 1.5e-182 643.3 430 68.8
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 1.9e-182 642.9 445 67.6
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 1.0e-180 637.1 425 71.5
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 4.0e-180 635.2 434 68.9
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 5.7e-179 631.3 447 68.0
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 7.5e-179 630.9 435 68.5
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 2.8e-178 629.0 434 67.5
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 4.9e-178 628.2 444 67.8
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 6.3e-178 627.9 424 70.0
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 8.3e-178 627.5 428 68.5
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 7.0e-177 624.4 434 67.1
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 2.0e-176 622.9 442 67.4
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 4.5e-176 621.7 425 68.7
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 1.7e-175 619.8 447 66.0
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 2.9e-175 619.0 425 68.5
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 3.8e-175 618.6 433 66.3
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 1.9e-174 616.3 448 65.8
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 8.0e-173 610.9 460 63.7
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 8.0e-173 610.9 451 63.4
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 1.4e-172 610.1 398 70.9
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 3.0e-172 609.0 455 64.4
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 3.0e-172 609.0 408 68.9
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 4.0e-172 608.6 422 68.0
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 1.5e-171 606.7 448 64.1
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 2.0e-171 606.3 448 64.1
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 2.0e-171 606.3 453 63.8
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 2.6e-171 605.9 433 66.7
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.3e-170 603.6 410 68.5
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.7e-170 603.2 410 68.3
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 1.7e-170 603.2 425 65.9
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 2.2e-170 602.8 450 64.0
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 3.7e-170 602.1 455 63.5
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 8.3e-170 600.9 455 62.9
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 1.1e-169 600.5 454 62.8
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 1.1e-169 600.5 432 65.5
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 1.4e-169 600.1 463 62.9
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 3.2e-169 599.0 425 66.4
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 3.2e-169 599.0 448 62.7
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 1.2e-168 597.0 433 63.5
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 1.6e-168 596.7 419 65.4
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 2.0e-168 596.3 426 67.1
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 2.7e-168 595.9 423 65.5
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 5.9e-168 594.7 422 65.6
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 5.0e-167 591.7 430 64.2
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 8.6e-167 590.9 423 65.0
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 4.3e-166 588.6 422 64.5
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 5.6e-166 588.2 484 59.5
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 7.3e-166 587.8 429 66.2
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 9.5e-166 587.4 431 64.0
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 3.6e-165 585.5 398 67.8
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 4.7e-165 585.1 436 62.6
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 6.2e-165 584.7 423 64.3
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 8.9e-164 580.9 408 67.2
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 4.6e-160 568.5 429 64.1
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 6.6e-159 564.7 443 59.8
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 6.6e-159 564.7 353 72.8
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 4.3e-158 562.0 424 61.6
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 7.3e-158 561.2 429 61.8
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 9.5e-158 560.8 460 60.0
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 9.5e-158 560.8 414 65.2
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 1.2e-157 560.5 460 59.3
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 1.7e-151 540.0 398 62.3
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 1.7e-151 540.0 400 63.0
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 2.3e-151 539.7 398 62.1
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 3.0e-151 539.3 452 59.7
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 3.3e-150 535.8 455 59.3
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 3.6e-149 532.3 425 60.9
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.8e-148 530.0 435 59.8
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 4.6e-144 515.4 341 69.2
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 1.5e-142 510.4 356 69.4
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 1.9e-142 510.0 436 60.6
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 4.7e-141 505.4 444 53.6
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 3.1e-140 502.7 423 56.0
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 5.4e-137 491.9 435 57.5
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 7.1e-137 491.5 414 57.7
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 7.1e-137 491.5 241 98.3
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.6e-136 488.8 397 61.2
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.0e-135 487.6 415 59.0
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 1.7e-135 486.9 332 69.9
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 1.7e-135 486.9 447 52.1
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 2.3e-135 486.5 445 54.6
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 3.4e-131 472.6 334 67.7
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 8.4e-130 468.0 416 57.7
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 6.2e-125 451.8 343 63.3
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 5.3e-124 448.7 338 63.6
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 4.5e-123 445.7 338 63.0
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 1.3e-114 417.5 422 48.8
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 5.9e-107 392.1 226 77.4
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 6.5e-82 308.9 240 63.8
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 1.0e-74 285.0 198 67.2
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 3.1e-68 263.5 239 56.1
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 1.5e-57 228.0 382 33.0
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.1e-52 211.8 130 78.5
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.1e-52 211.8 130 78.5
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 1.9e-49 201.1 164 57.9
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 3.2e-44 183.7 386 33.2
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 4.4e-38 163.3 161 50.3
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 1.3e-34 151.8 134 53.0
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.0e-30 137.9 140 52.9
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.0e-30 137.9 140 52.9
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 2.4e-28 131.0 70 85.7
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 3.9e-26 123.6 120 53.3
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 1.7e-21 108.2 63 76.2
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 5.4e-20 103.2 76 63.2
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 1.8e-15 88.2 207 29.0
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 2.4e-15 87.8 204 29.4
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 5.3e-15 86.7 207 28.5
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 6.0e-11 73.2 75 45.3
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 2.3e-10 71.2 378 19.6
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 9.0e-07 59.3 77 39.0


User provided reference genes

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