Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G3147 Papaver somniferum HOM05D003500 ORTHO05D003919 3.6e-162 575.1 345 100.0
PSO063G0209 Papaver somniferum HOM05D003500 ORTHO05D003919 3.1e-153 545.4 345 95.9
TAR624G1157 Trochodendron aralioides HOM05D003500 ORTHO05D003919 6.2e-45 185.7 350 41.7
Dinv14210 Davidia involucrata HOM05D003500 ORTHO05D003919 8.4e-34 148.7 352 37.2
TAR636G0685 Trochodendron aralioides HOM05D003500 ORTHO05D003919 3.2e-33 146.7 326 35.9
Cfa013328 Carpinus fangiana HOM05D003500 ORTHO05D003919 4.6e-32 142.9 353 36.0
Haze_21819 Corylus avellana HOM05D003500 ORTHO05D003919 2.3e-31 140.6 353 36.0
CiPaw.07G208500 Carya illinoinensis HOM05D003500 ORTHO05D003919 2.5e-30 137.1 351 35.6
Hma1.2p1_0140F.1_g063720 Hydrangea macrophylla HOM05D003500 ORTHO05D003919 8.1e-29 132.1 350 34.9
GSVIVG01035753001 Vitis vinifera HOM05D003500 ORTHO05D003919 2.6e-27 127.1 339 40.1
QL12p026085 Quercus lobata HOM05D003500 ORTHO05D003919 3.4e-27 126.7 352 33.2
Lj8A606T22 Lonicera japonica HOM05D003500 ORTHO05D003919 1.7e-26 124.4 354 34.7
Rhsim07G0154900 Rhododendron simsii HOM05D003500 ORTHO05D003919 3.8e-26 123.2 351 32.8
Actinidia15719 Actinidia chinensis HOM05D003500 ORTHO05D003919 1.9e-25 120.9 350 33.1
Thecc.09G037900 Theobroma cacao HOM05D003500 ORTHO05D003919 3.2e-25 120.2 354 32.5
Actinidia14650 Actinidia chinensis HOM05D003500 ORTHO05D003919 9.3e-25 118.6 345 33.6
Duzib168G0612 Durio zibethinus HOM05D003500 ORTHO05D003919 9.3e-25 118.6 354 32.2
Nitab4.5_0002393g0050 Nicotiana tabacum HOM05D003500 ORTHO05D003919 9.3e-25 118.6 354 31.6
Eucgr.C02880 Eucalyptus grandis HOM05D003500 ORTHO05D003919 3.5e-24 116.7 354 30.8
Potri.018G035800 Populus trichocarpa HOM05D003500 ORTHO05D003919 4.6e-24 116.3 347 31.7
RcHm_v2.0_Chr6g0305551 Rosa chinensis HOM05D003500 ORTHO05D003919 4.6e-24 116.3 341 31.7
Dinv30507 Davidia involucrata HOM05D003500 ORTHO05D003919 1.0e-23 115.2 328 36.3
CsaV3_2G031120 Cucumis sativus L. HOM05D003500 ORTHO05D003919 2.3e-23 114.0 360 32.8
CSS0048332 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 3.9e-23 113.2 353 32.0
Gohir.A07G024400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 5.1e-23 112.8 350 30.6
SGA_v2.0_scaffold169G38640 Striga asiatica HOM05D003500 ORTHO05D003919 1.9e-22 110.9 342 31.9
Sopen08g021950 Solanum pennellii HOM05D003500 ORTHO05D003919 2.5e-22 110.5 354 30.5
vmacro05351 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 2.5e-22 110.5 327 33.3
Sabra18G0036300 Salix brachista HOM05D003500 ORTHO05D003919 3.3e-22 110.2 350 32.0
PGSC0003DMG400014491 Solanum tuberosum HOM05D003500 ORTHO05D003919 3.3e-22 110.2 354 29.4
Aqoxy7G01735 Aquilegia oxysepala HOM05D003500 ORTHO05D003919 4.3e-22 109.8 360 37.2
Gohir.D07G028000 Gossypium hirsutum HOM05D003500 ORTHO05D003919 5.6e-22 109.4 350 29.7
Duzib187G1538 Durio zibethinus HOM05D003500 ORTHO05D003919 7.4e-22 109.0 345 32.2
Manes.16G069800 Manihot esculenta HOM05D003500 ORTHO05D003919 1.6e-21 107.8 352 33.0
FAN20G2191 Fragaria x ananassa HOM05D003500 ORTHO05D003919 2.8e-21 107.1 341 29.9
Ciclev10009124m.g Citrus clementina HOM05D003500 ORTHO05D003919 3.7e-21 106.7 342 30.1
Solyc08g068060.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 4.8e-21 106.3 351 29.3
Haze_16428 Corylus avellana HOM05D003500 ORTHO05D003919 6.2e-21 105.9 351 33.3
CAN.G886.10 Capsicum annuum HOM05D003500 ORTHO05D003919 1.1e-20 105.1 356 29.5
Atru.chr7.2303 Acer truncatum HOM05D003500 ORTHO05D003919 1.4e-20 104.8 347 30.0
MELO3C011162.2 Cucumis melo HOM05D003500 ORTHO05D003919 1.4e-20 104.8 360 31.9
DCAR_003060 Daucus carota HOM05D003500 ORTHO05D003919 3.1e-20 103.6 345 29.9
Cfa002069 Carpinus fangiana HOM05D003500 ORTHO05D003919 5.3e-20 102.8 347 32.3
Dinv30238 Davidia involucrata HOM05D003500 ORTHO05D003919 5.3e-20 102.8 163 45.4
ClCG08G012430 Citrullus lanatus HOM05D003500 ORTHO05D003919 9.0e-20 102.1 348 31.9
vmacro18911 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 9.0e-20 102.1 344 31.7
CsaV3_3G025090 Cucumis sativus L. HOM05D003500 ORTHO05D003919 1.5e-19 101.3 351 30.8
CiPaw.01G239100 Carya illinoinensis HOM05D003500 ORTHO05D003919 2.0e-19 100.9 162 45.1
FvH4_2g36330 Fragaria vesca HOM05D003500 ORTHO05D003919 2.0e-19 100.9 341 29.6
HanXRQChr01g0029371 Helianthus annuus HOM05D003500 ORTHO05D003919 3.4e-19 100.1 341 30.8
Lalb_Chr03g0029341 Lupinus albus HOM05D003500 ORTHO05D003919 5.8e-19 99.4 348 30.2
FAN27G2449 Fragaria x ananassa HOM05D003500 ORTHO05D003919 2.2e-18 97.4 341 28.2
MSTRG.14007 Avicennia marina HOM05D003500 ORTHO05D003919 2.9e-18 97.1 351 37.0
CANSAT35G1218 Cannabis sativa HOM05D003500 ORTHO05D003919 3.8e-18 96.7 348 31.3
PGR044G1892 Punica granatum HOM05D003500 ORTHO05D003919 3.8e-18 96.7 369 31.2
MD15G1099900 Malus domestica HOM05D003500 ORTHO05D003919 4.9e-18 96.3 350 37.1
ClCG07G013080 Citrullus lanatus HOM05D003500 ORTHO05D003919 6.5e-18 95.9 353 30.0
QL05p023510 Quercus lobata HOM05D003500 ORTHO05D003919 4.2e-17 93.2 155 41.9
Nitab4.5_0000250g0140 Nicotiana tabacum HOM05D003500 ORTHO05D003919 5.5e-17 92.8 354 28.5
arahy.Tifrunner.gnm1.ann1.V41S3G Arachis hypogaea HOM05D003500 ORTHO05D003919 7.1e-17 92.4 353 29.5
Gorai.001G029300 Gossypium raimondii HOM05D003500 ORTHO05D003919 1.2e-16 91.7 345 27.5
Sed0015651 Sechium edule HOM05D003500 ORTHO05D003919 2.1e-16 90.9 345 30.4
AUR62032393 Chenopodium quinoa HOM05D003500 ORTHO05D003919 2.7e-16 90.5 346 27.5
COL.COLO4_30382 Corchorus olitorius HOM05D003500 ORTHO05D003919 3.5e-16 90.1 144 38.9
Prupe.1G454700 Prunus persica HOM05D003500 ORTHO05D003919 4.6e-16 89.7 349 29.2
Sc12g0009290 Simmondsia chinensis HOM05D003500 ORTHO05D003919 7.9e-16 89.0 140 42.9
TWI18G0570 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 7.9e-16 89.0 340 29.4
Prupe.3G070800 Prunus persica HOM05D003500 ORTHO05D003919 1.0e-15 88.6 346 30.1
Migut.E01507 Erythranthe guttata HOM05D003500 ORTHO05D003919 1.3e-15 88.2 350 26.3
AUR62024822 Chenopodium quinoa HOM05D003500 ORTHO05D003919 1.8e-15 87.8 348 27.0
TWI32G0121 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 2.3e-15 87.4 345 30.1
A01p05660 Brassica napus HOM05D003500 ORTHO05D003919 3.0e-15 87.0 351 31.1
Oeu014656.1 Olea europaea HOM05D003500 ORTHO05D003919 3.9e-15 86.7 158 41.8
Sed0003187 Sechium edule HOM05D003500 ORTHO05D003919 3.9e-15 86.7 355 30.1
CARHR240660 Cardamine hirsuta HOM05D003500 ORTHO05D003919 6.7e-15 85.9 345 29.0
ECA248G2427 Erigeron canadensis HOM05D002222 ORTHO05D002354 6.7e-15 85.9 158 41.1
Oeu000451.1 Olea europaea HOM05D003500 ORTHO05D003919 6.7e-15 85.9 358 30.7
Sc09g0008940 Simmondsia chinensis HOM05D003500 ORTHO05D003919 6.7e-15 85.9 348 27.9
Thecc.06G088400 Theobroma cacao HOM05D003500 ORTHO05D003919 8.7e-15 85.5 371 28.3
arahy.Tifrunner.gnm1.ann1.HR3BJH Arachis hypogaea HOM05D003500 ORTHO05D003919 1.1e-14 85.1 352 28.7
CANSAT56G2888 Cannabis sativa HOM05D003500 ORTHO05D003919 1.1e-14 85.1 139 41.7
MD17G1194800 Malus domestica HOM05D003500 ORTHO05D003919 1.1e-14 85.1 357 29.4
Migut.D01030 Erythranthe guttata HOM05D003500 ORTHO05D003919 1.5e-14 84.7 337 26.4
Thhalv10025931m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 1.5e-14 84.7 350 29.1
THA.LOC104818564 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 1.5e-14 84.7 355 30.4
Peaxi162Scf00105g00615 Petunia axillaris HOM05D003500 ORTHO05D003919 1.9e-14 84.3 347 28.5
C01p06230 Brassica napus HOM05D003500 ORTHO05D003919 2.5e-14 84.0 167 40.7
PGR102G2146 Punica granatum HOM05D003500 ORTHO05D003919 2.5e-14 84.0 347 30.3
AT4G32680 Arabidopsis thaliana HOM05D003500 ORTHO05D003919 3.3e-14 83.6 349 28.4
Potri.003G055200 Populus trichocarpa HOM05D003500 ORTHO05D003919 4.3e-14 83.2 342 30.4
EL10Ac2g02525 Beta vulgaris HOM05D003500 ORTHO05D003919 5.7e-14 82.8 348 26.1
BcaB03g12755 Brassica carinata HOM05D003500 ORTHO05D003919 5.7e-14 82.8 352 27.6
Peaxi162Scf00015g10038 Petunia axillaris HOM05D003500 ORTHO05D003919 5.7e-14 82.8 133 42.1
Ciclev10027012m.g Citrus clementina HOM05D003500 ORTHO05D003919 7.4e-14 82.4 348 28.7
Gohir.A02G121400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 7.4e-14 82.4 141 39.0
Sed0000644 Sechium edule HOM05D003500 ORTHO05D003919 7.4e-14 82.4 156 38.5
C03p87180 Brassica napus HOM05D003500 ORTHO05D003919 9.7e-14 82.0 350 28.6
BolC3t21020H Brassica oleracea HOM05D003500 ORTHO05D003919 9.7e-14 82.0 350 28.6
Gorai.002G059400 Gossypium raimondii HOM05D003500 ORTHO05D003919 9.7e-14 82.0 155 39.4
Solyc03g120180.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 9.7e-14 82.0 156 36.5
MBI11_g07535_MAGBIO Magnolia biondii HOM05D003500 ORTHO05D003919 1.3e-13 81.6 347 34.9
BraA01t00536Z Brassica rapa HOM05D003500 ORTHO05D003919 1.6e-13 81.3 351 29.9
Rhsim08G0221500 Rhododendron simsii HOM05D003500 ORTHO05D003919 1.6e-13 81.3 131 45.8
BcaC09g52062 Brassica carinata HOM05D003500 ORTHO05D003919 2.8e-13 80.5 345 29.6
BraA08t33760Z Brassica rapa HOM05D003500 ORTHO05D003919 2.8e-13 80.5 353 28.9
Nitab4.5_0000671g0100 Nicotiana tabacum HOM05D003500 ORTHO05D003919 2.8e-13 80.5 164 39.0
BolC1t00621H Brassica oleracea HOM05D003500 ORTHO05D003919 3.7e-13 80.1 348 28.2
Lsat_1_v5_gn_1_49081 Lactuca sativa HOM05D003500 ORTHO05D003919 3.7e-13 80.1 328 29.0
SGA_v2.0_scaffold37G14827 Striga asiatica HOM05D003500 ORTHO05D003919 3.7e-13 80.1 152 37.5
Aa31LG2G16940 Aethionema arabicum HOM05D003500 ORTHO05D003919 4.8e-13 79.7 351 29.1
BcaC01g01007 Brassica carinata HOM05D003500 ORTHO05D003919 4.8e-13 79.7 347 28.5
Gohir.D03G063800 Gossypium hirsutum HOM05D003500 ORTHO05D003919 4.8e-13 79.7 166 36.1
RcHm_v2.0_Chr2g0137891 Rosa chinensis HOM05D003500 ORTHO05D003919 6.3e-13 79.3 346 28.0
TPR.G31013 Trifolium pratense HOM05D003500 ORTHO05D003919 1.1e-12 78.6 155 38.1
Thhalv10012010m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 1.4e-12 78.2 340 29.7
Sp7g30440 Schrenkiella parvula HOM05D003500 ORTHO05D003919 1.8e-12 77.8 357 28.0
AL7G19060 Arabidopsis lyrata HOM05D003500 ORTHO05D003919 2.4e-12 77.4 349 27.5
FvH4_6g31220 Fragaria vesca HOM05D003500 ORTHO05D003919 2.4e-12 77.4 349 26.4
Lj3g0003659 Lotus japonicus HOM05D003500 ORTHO05D003919 2.4e-12 77.4 166 36.1
Nitab4.5_0005851g0060 Nicotiana tabacum HOM05D003500 ORTHO05D003919 2.4e-12 77.4 133 41.4
SalBow2G3431 Salvia bowleyana HOM05D003500 ORTHO05D003919 2.4e-12 77.4 169 37.9
AL7G19270 Arabidopsis lyrata HOM05D002156 ORTHO05D003919 3.1e-12 77.0 164 37.2
Duzib235G1266 Durio zibethinus HOM05D003500 ORTHO05D003919 3.1e-12 77.0 160 34.4
Manes.11G047100 Manihot esculenta HOM05D003500 ORTHO05D003919 4.1e-12 76.6 348 27.9
FAN14G5419 Fragaria x ananassa HOM05D003500 ORTHO05D003919 6.9e-12 75.9 348 26.1
SHI10927 Sapria himalayana HOM05D003500 ORTHO05D003919 9.0e-12 75.5 161 37.3
Carub.0007s0785 Capsella rubella HOM05D003500 ORTHO05D003919 1.5e-11 74.7 348 27.9
Glyma.08G206700 Glycine max HOM05D003500 ORTHO05D003919 1.5e-11 74.7 353 27.8
ATR0051G010 Amborella trichopoda HOM05D003500 ORTHO05D003919 2.0e-11 74.3 155 34.8
unitig_899.g14777 Utricularia gibba HOM05D003500 ORTHO05D003919 2.0e-11 74.3 135 40.7
TPR.G21779 Trifolium pratense HOM05D003500 ORTHO05D003919 3.4e-11 73.6 159 36.5
C06p07810 Brassica napus HOM05D003500 ORTHO05D003919 4.5e-11 73.2 344 27.6
Lalb_Chr04g0262681 Lupinus albus HOM05D003500 ORTHO05D003919 5.9e-11 72.8 350 26.9
Ah.10g025530 Amaranthus hybridus HOM05D003500 ORTHO05D003919 7.6e-11 72.4 350 26.6
BolC6t35867H Brassica oleracea HOM05D003500 ORTHO05D003919 7.6e-11 72.4 345 27.5
A08p18080 Brassica napus HOM05D003500 ORTHO05D003919 1.0e-10 72.0 170 38.8
Medtr6g007370 Medicago truncatula HOM05D003500 ORTHO05D003919 1.0e-10 72.0 162 35.2
Medtr7g446310 Medicago truncatula HOM05D003500 ORTHO05D003919 1.0e-10 72.0 162 35.2
Ca_26668_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 1.3e-10 71.6 142 39.4
VMungo0331G1412 Vigna mungo HOM05D003500 ORTHO05D003919 1.3e-10 71.6 348 27.9
Medtr4g012520 Medicago truncatula HOM05D003500 ORTHO05D003919 1.7e-10 71.2 341 27.3
Ca_20390_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 2.9e-10 70.5 141 37.6
Lalb_Chr01g0012691 Lupinus albus HOM05D003500 ORTHO05D003919 5.0e-10 69.7 133 34.6
BraA06t23403Z Brassica rapa HOM05D003500 ORTHO05D003919 6.5e-10 69.3 345 27.8
A06p01860 Brassica napus HOM05D003500 ORTHO05D003919 8.5e-10 68.9 345 27.0
Cc08_g08590 Coffea canephora HOM05D003500 ORTHO05D003919 8.5e-10 68.9 337 26.4
Glyma.07G006100 Glycine max HOM05D003500 ORTHO05D003919 8.5e-10 68.9 335 26.6
BcaB02g11002 Brassica carinata HOM05D003500 ORTHO05D003919 1.1e-09 68.6 167 32.3
BcaC08g43415 Brassica carinata HOM05D003500 ORTHO05D003919 1.4e-09 68.2 137 39.4
Migut.I00867 Erythranthe guttata HOM05D003500 ORTHO05D003919 1.4e-09 68.2 139 41.0
MSTRG.4733 Avicennia marina HOM05D003500 ORTHO05D003919 1.9e-09 67.8 343 28.6
Zm00001eb366780 Zea mays HOM05D039918 ORTHO05D003919 1.9e-09 67.8 120 37.5
VMungo1127G1234 Vigna mungo HOM05D003500 ORTHO05D003919 4.2e-09 66.6 348 26.7
Psat7g063400 Pisum sativum HOM05D003500 ORTHO05D003919 7.2e-09 65.9 351 29.1
ECA233G0641 Erigeron canadensis HOM05D003500 ORTHO05D003919 9.3e-09 65.5 171 33.9
Sp1g38960 Schrenkiella parvula HOM05D003500 ORTHO05D003919 1.6e-08 64.7 165 33.9
Psat7g252240 Pisum sativum HOM05D003500 ORTHO05D003919 2.1e-08 64.3 134 35.1
SalBow2G0526 Salvia bowleyana HOM05D003500 ORTHO05D003919 2.1e-08 64.3 337 27.3
CSS0016282 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 4.6e-08 63.2 87 52.9
CSS0048346 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 4.6e-08 63.2 87 52.9
Eucgr.F03015 Eucalyptus grandis HOM05D003500 ORTHO05D003919 4.6e-08 63.2 130 35.4
THA.LOC104810618 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 4.6e-08 63.2 134 38.8
Peaxi162Scf01026g00254 Petunia axillaris HOM05D003500 ORTHO05D003919 6.1e-08 62.8 329 26.4
Phvul.011G117800 Phaseolus vulgaris HOM05D003500 ORTHO05D003919 6.1e-08 62.8 130 35.4
Manes.04G123600 Manihot esculenta HOM05D003500 ORTHO05D003919 7.9e-08 62.4 300 26.3
Hund25650 Selenicereus undatus HOM05D003500 ORTHO05D003919 7.9e-08 62.4 123 31.7
CARHR042490 Cardamine hirsuta HOM05D003500 ORTHO05D003919 1.4e-07 61.6 348 26.7
HPP92_005532 Vanilla planifolia HOM05D003500 ORTHO05D003919 1.4e-07 61.6 340 24.7
Actinidia32755 Actinidia chinensis HOM05D003500 ORTHO05D003919 2.3e-07 60.8 162 38.3
Os01g0863400 Oryza sativa ssp. japonica HOM05D003500 ORTHO05D003919 2.3e-07 60.8 345 26.1
unitig_32.g11118 Utricularia gibba HOM05D003500 ORTHO05D003919 2.3e-07 60.8 341 26.1
Glyma.12G113900 Glycine max HOM05D003500 ORTHO05D003919 3.0e-07 60.5 344 25.3
HanXRQChr02g0053631 Helianthus annuus HOM05D003500 ORTHO05D003919 3.9e-07 60.1 167 30.5
SGA_v2.0_scaffold68G23002 Striga asiatica HOM05D003500 ORTHO05D003919 3.9e-07 60.1 334 26.0
HanXRQChr17g0541731 Helianthus annuus HOM05D003500 ORTHO05D003919 5.1e-07 59.7 163 32.5
Lj3g0021763 Lotus japonicus HOM05D003500 ORTHO05D003919 8.8e-07 58.9 344 25.9
MELO3C012963.2 Cucumis melo HOM05D003500 ORTHO05D003919 1.5e-06 58.2 290 28.6
Phvul.010G150500 Phaseolus vulgaris HOM05D003500 ORTHO05D003919 1.5e-06 58.2 350 27.1
Carub.0001s4135 Capsella rubella HOM05D003500 ORTHO05D003919 2.5e-06 57.4 345 26.7
arahy.Tifrunner.gnm1.ann1.Y86J0E Arachis hypogaea HOM05D003500 ORTHO05D003919 4.3e-06 56.6 134 30.6
Sabra06G0191500 Salix brachista HOM05D003500 ORTHO05D003919 4.3e-06 56.6 114 42.1
Nn2g11771 Nelumbo nucifera HOM05D003500 ORTHO05D003919 5.7e-06 56.2 230 31.7
Potri.006G244600 Populus trichocarpa HOM05D003500 ORTHO05D003919 7.4e-06 55.8 97 42.3
AT1G52343 Arabidopsis thaliana HOM05D003500 ORTHO05D003919 9.7e-06 55.5 345 25.8


User provided reference genes

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