Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G0014 Papaver somniferum HOM05D000068 ORTHO05D008004 1.9e-105 386.0 215 100.0
PSO478G3760 Papaver somniferum HOM05D000068 ORTHO05D008004 2.0e-97 359.4 214 86.9
Nn1g01334 Nelumbo nucifera HOM05D000068 ORTHO05D008004 5.6e-52 208.4 211 55.5
Dinv35171 Davidia involucrata HOM05D000068 ORTHO05D008004 1.2e-49 200.7 208 51.0
Haze_13771 Corylus avellana HOM05D000068 ORTHO05D008004 1.4e-47 193.7 211 49.3
Ciclev10004389m.g Citrus clementina HOM05D000068 ORTHO05D008004 5.4e-47 191.8 218 51.4
Manes.06G142900 Manihot esculenta HOM05D000068 ORTHO05D008004 1.7e-45 186.8 215 47.4
QL09p015467 Quercus lobata HOM05D000068 ORTHO05D008004 3.0e-45 186.0 155 58.1
Hma1.2p1_0270F.1_g108530 Hydrangea macrophylla HOM05D000068 ORTHO05D008004 5.6e-44 181.8 145 59.3
Actinidia34073 Actinidia chinensis HOM05D000068 ORTHO05D008004 1.2e-43 180.6 216 46.8
AL7G27640 Arabidopsis lyrata HOM05D000068 ORTHO05D008004 3.6e-43 179.1 114 71.1
arahy.Tifrunner.gnm1.ann1.9PJ8QM Arachis hypogaea HOM05D000068 ORTHO05D008004 4.7e-43 178.7 199 49.7
AT4G25450 Arabidopsis thaliana HOM05D000068 ORTHO05D008004 6.2e-43 178.3 114 71.1
arahy.Tifrunner.gnm1.ann1.4DG32P Arachis hypogaea HOM05D000068 ORTHO05D008004 6.2e-43 178.3 116 69.8
Potri.015G136700 Populus trichocarpa HOM05D000068 ORTHO05D008004 6.2e-43 178.3 149 56.4
Thecc.03G169600 Theobroma cacao HOM05D000068 ORTHO05D008004 6.2e-43 178.3 113 71.7
PGR042G3668 Punica granatum HOM05D000068 ORTHO05D008004 8.1e-43 177.9 118 66.1
Atru.chr1.535 Acer truncatum HOM05D000068 ORTHO05D008004 1.8e-42 176.8 213 49.8
Aqoxy7G00466 Aquilegia oxysepala HOM05D000068 ORTHO05D008004 1.8e-42 176.8 163 55.8
Glyma.09G147400 Glycine max HOM05D000068 ORTHO05D008004 2.3e-42 176.4 162 56.8
RcHm_v2.0_Chr1g0376591 Rosa chinensis HOM05D000068 ORTHO05D008004 2.3e-42 176.4 196 50.5
Thhalv10024541m.g Eutrema salsugineum HOM05D000068 ORTHO05D008004 3.1e-42 176.0 118 66.1
MD07G1262600 Malus domestica HOM05D000068 ORTHO05D008004 5.2e-42 175.3 113 71.7
Sabra15G0148400 Salix brachista HOM05D000068 ORTHO05D008004 5.2e-42 175.3 205 47.8
Sp7g23500 Schrenkiella parvula HOM05D000068 ORTHO05D008004 5.2e-42 175.3 118 66.9
BcaB03g12468 Brassica carinata HOM05D000068 ORTHO05D008004 6.8e-42 174.9 118 66.9
BraA08t34066Z Brassica rapa HOM05D000068 ORTHO05D008004 6.8e-42 174.9 118 66.9
TWI23G1186 Tripterygium wilfordii HOM05D000068 ORTHO05D008004 6.8e-42 174.9 219 47.5
Actinidia32904 Actinidia chinensis HOM05D000068 ORTHO05D008004 8.9e-42 174.5 173 50.9
Aa31sc521G30 Aethionema arabicum HOM05D000068 ORTHO05D008004 8.9e-42 174.5 112 72.3
THA.LOC104798735 Tarenaya hassleriana HOM05D000068 ORTHO05D008004 8.9e-42 174.5 118 66.9
DCAR_018154 Daucus carota HOM05D000068 ORTHO05D008004 1.5e-41 173.7 145 58.6
Duzib084G1174 Durio zibethinus HOM05D000068 ORTHO05D008004 1.5e-41 173.7 113 69.9
Eucgr.A02836 Eucalyptus grandis HOM05D000068 ORTHO05D008004 1.5e-41 173.7 111 69.4
Prupe.2G289200 Prunus persica HOM05D000068 ORTHO05D008004 1.5e-41 173.7 200 49.5
BcaC07g38190 Brassica carinata HOM05D000068 ORTHO05D008004 2.0e-41 173.3 118 66.1
A08p21170 Brassica napus HOM05D000068 ORTHO05D008004 2.0e-41 173.3 118 66.1
BolC8t48610H Brassica oleracea HOM05D000068 ORTHO05D008004 2.0e-41 173.3 118 66.1
CARHR232880 Cardamine hirsuta HOM05D000068 ORTHO05D008004 2.6e-41 172.9 118 66.9
COL.COLO4_14251 Corchorus olitorius HOM05D000068 ORTHO05D008004 3.4e-41 172.6 120 68.3
FAN06G0981 Fragaria x ananassa HOM05D000068 ORTHO05D008004 3.4e-41 172.6 186 51.1
MSTRG.27140 Avicennia marina HOM05D000068 ORTHO05D008004 5.8e-41 171.8 206 46.1
CiPaw.04G068300 Carya illinoinensis HOM05D000068 ORTHO05D008004 5.8e-41 171.8 178 50.6
FvH4_7g28920 Fragaria vesca HOM05D000068 ORTHO05D008004 9.8e-41 171.0 186 50.5
FAN06G1335 Fragaria x ananassa HOM05D000068 ORTHO05D008004 9.8e-41 171.0 186 50.5
Rhsim03G0176200 Rhododendron simsii HOM05D000068 ORTHO05D008004 9.8e-41 171.0 203 45.8
GSVIVG01010634001 Vitis vinifera HOM05D000068 ORTHO05D008004 9.8e-41 171.0 145 57.2
CANSAT21G0450 Cannabis sativa HOM05D000068 ORTHO05D008004 2.9e-40 169.5 114 66.7
Phvul.004G122300 Phaseolus vulgaris HOM05D000068 ORTHO05D008004 2.9e-40 169.5 144 57.6
SGA_v2.0_scaffold2G01086 Striga asiatica HOM05D000068 ORTHO05D008004 3.7e-40 169.1 112 67.0
CSS0031874 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D008004 6.4e-40 168.3 145 55.2
CSS0037171 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D008004 6.4e-40 168.3 145 55.2
Carub.0007s1553 Capsella rubella HOM05D000068 ORTHO05D008004 6.4e-40 168.3 114 68.4
Gohir.A08G094300 Gossypium hirsutum HOM05D000068 ORTHO05D008004 8.3e-40 167.9 113 68.1
Gorai.004G111900 Gossypium raimondii HOM05D000068 ORTHO05D008004 1.1e-39 167.5 113 67.3
Nitab4.5_0000832g0200 Nicotiana tabacum HOM05D000068 ORTHO05D008004 1.1e-39 167.5 176 50.0
Gohir.D08G104800 Gossypium hirsutum HOM05D000068 ORTHO05D008004 1.4e-39 167.2 113 67.3
vmacro06750 Vaccinium macrocarpon HOM05D000068 ORTHO05D008004 1.4e-39 167.2 186 48.9
Migut.F00384 Erythranthe guttata HOM05D000068 ORTHO05D008004 1.9e-39 166.8 204 46.6
VMungo0464G1471 Vigna mungo HOM05D000068 ORTHO05D008004 2.4e-39 166.4 144 56.9
FAN03G2985 Fragaria x ananassa HOM05D000068 ORTHO05D008004 3.2e-39 166.0 186 48.4
Psat1g105160 Pisum sativum HOM05D000068 ORTHO05D008004 1.2e-38 164.1 195 48.7
Cpa.g.sc107.1 Carica papaya HOM05D000068 ORTHO05D008004 1.6e-38 163.7 144 50.7
Lj1A990G57 Lonicera japonica HOM05D000068 ORTHO05D008004 1.6e-38 163.7 117 65.0
Cc02_g03450 Coffea canephora HOM05D000068 ORTHO05D008004 3.5e-38 162.5 182 45.6
FAN01G0643 Fragaria x ananassa HOM05D000068 ORTHO05D008004 3.5e-38 162.5 193 48.2
Lj2g0015007 Lotus japonicus HOM05D000068 ORTHO05D008004 3.5e-38 162.5 216 45.8
HanXRQChr15g0486321 Helianthus annuus HOM05D000068 ORTHO05D008004 1.0e-37 161.0 182 48.4
Ca_26265_v3 Cicer arietinum L. HOM05D000068 ORTHO05D008004 3.0e-37 159.5 113 64.6
ATR0757G104 Amborella trichopoda HOM05D000068 ORTHO05D008004 3.9e-37 159.1 110 65.5
Dinv28495 Davidia involucrata HOM05D000068 ORTHO05D008004 5.1e-37 158.7 105 65.7
CSS0023345 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D008004 6.6e-37 158.3 112 63.4
CSS0038988 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D008004 6.6e-37 158.3 112 63.4
Medtr6g465300 Medicago truncatula HOM05D000068 ORTHO05D008004 6.6e-37 158.3 113 62.8
Os07g0464600 Oryza sativa ssp. japonica HOM05D000068 ORTHO05D008004 6.6e-37 158.3 183 50.3
Peaxi162Scf00648g00223 Petunia axillaris HOM05D000068 ORTHO05D008004 6.6e-37 158.3 174 47.7
EL10Ac3g05681 Beta vulgaris HOM05D000068 ORTHO05D008004 1.5e-36 157.1 173 49.1
MBI04_g45297_MAGBIO Magnolia biondii HOM05D000068 ORTHO05D008004 1.5e-36 157.1 135 57.0
Sc13g0008410 Simmondsia chinensis HOM05D000068 ORTHO05D008004 1.5e-36 157.1 164 48.2
Lsat_1_v5_gn_9_53861 Lactuca sativa HOM05D000068 ORTHO05D008004 1.9e-36 156.8 176 48.9
CDE11G1240 Ceratophyllum demersum HOM05D000068 ORTHO05D008004 2.5e-36 156.4 143 53.1
Zm00001eb306760 Zea mays HOM05D000068 ORTHO05D008004 2.5e-36 156.4 184 47.8
Lalb_Chr03g0034221 Lupinus albus HOM05D000068 ORTHO05D008004 7.3e-36 154.8 111 64.0
Sopen03g005200 Solanum pennellii HOM05D000068 ORTHO05D008004 7.3e-36 154.8 175 46.3
ClCG01G005380 Citrullus lanatus HOM05D000068 ORTHO05D008004 9.5e-36 154.5 210 43.8
PGSC0003DMG400014306 Solanum tuberosum HOM05D000068 ORTHO05D008004 9.5e-36 154.5 174 46.6
HPP92_026378 Vanilla planifolia HOM05D000068 ORTHO05D008004 2.8e-35 152.9 110 60.9
Sed0012146 Sechium edule HOM05D000068 ORTHO05D008004 3.6e-35 152.5 191 46.1
Solyc03g026310.4 Solanum lycopersicum HOM05D000068 ORTHO05D008004 4.7e-35 152.1 175 45.7
SalBow4G2416 Salvia bowleyana HOM05D000068 ORTHO05D008004 5.2e-34 148.7 103 63.1
Sed0022360 Sechium edule HOM05D000068 ORTHO05D008004 5.2e-34 148.7 146 49.3
ECA232G0015 Erigeron canadensis HOM05D000068 ORTHO05D008004 2.0e-33 146.7 148 51.4
Oeu047984.1 Olea europaea HOM05D000068 ORTHO05D008004 2.0e-33 146.7 115 60.9
CsaV3_5G005630 Cucumis sativus L. HOM05D000068 ORTHO05D008004 4.4e-33 145.6 183 47.5
Nitab4.5_0008764g0030 Nicotiana tabacum HOM05D000068 ORTHO05D008004 1.9e-31 140.2 175 45.1
Pp3c16_7170 Physcomitrium patens HOM05D000068 ORTHO05D008004 1.6e-30 137.1 111 56.8
AUR62021245 Chenopodium quinoa HOM05D000068 ORTHO05D008004 1.0e-29 134.4 203 40.4
SEGI_37609 Sequoiadendron giganteum HOM05D000068 ORTHO05D008004 2.5e-28 129.8 110 55.5
SMO137G0363 Selaginella moellendorffii HOM05D000068 ORTHO05D008004 1.6e-27 127.1 107 52.3
TAR375G1046 Trochodendron aralioides HOM05D000068 ORTHO05D008004 4.0e-26 122.5 84 69.0
Mapoly0091s0010 Marchantia polymorpha HOM05D000068 ORTHO05D008004 1.2e-25 120.9 118 52.5
TPR.G9189 Trifolium pratense HOM05D000068 ORTHO05D008004 3.2e-23 112.8 79 63.3
Ah.13g067960 Amaranthus hybridus HOM05D001521 ORTHO05D001342 2.1e-22 110.2 146 43.8
FAN03G0508 Fragaria x ananassa HOM05D000068 ORTHO05D008004 1.7e-21 107.1 73 65.8
CDE02G3487 Ceratophyllum demersum HOM05D000068 ORTHO05D008004 1.1e-20 104.4 69 69.6
AagrBONN_evm.TU.Sc2ySwM_369.367 Anthoceros agrestis HOM05D000068 ORTHO05D008004 1.9e-20 103.6 74 62.2
SalBow8G3732 Salvia bowleyana HOM05D000068 ORTHO05D008004 4.8e-19 99.0 64 67.2
Hund04697 Selenicereus undatus HOM05D000068 ORTHO05D008004 1.8e-18 97.1 131 43.5
CBR_g55235 Chara braunii HOM05D000068 ORTHO05D008004 5.3e-18 95.5 114 44.7
MCO12G148 Micromonas commoda HOM05D000068 ORTHO05D008004 6.2e-11 72.0 103 37.9
CAN.G548.19 Capsicum annuum HOM05D000068 ORTHO05D008004 1.3e-08 64.3 107 39.3
TPR.G20926 Trifolium pratense HOM05D000068 ORTHO05D008004 3.5e-06 56.2 41 61.0


User provided reference genes

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