Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO781G0052 Papaver somniferum HOM05D004981 ORTHO05D005635 9.3e-191 670.2 386 100.0
PSO541G0435 Papaver somniferum HOM05D004981 ORTHO05D005635 5.5e-167 591.3 387 91.2
Nn5g30124 Nelumbo nucifera HOM05D004981 ORTHO05D005635 6.6e-80 302.0 422 51.4
MBI02_g08724_MAGBIO Magnolia biondii HOM05D004981 ORTHO05D005635 1.9e-79 300.4 383 54.3
Sed0011642 Sechium edule HOM05D004981 ORTHO05D005635 3.4e-76 289.7 416 49.0
CANSAT11G0061 Cannabis sativa HOM05D004981 ORTHO05D005635 6.4e-75 285.4 395 52.7
CSS0034779 Camellia sinensis var. sinensis HOM05D004981 ORTHO05D005635 4.2e-74 282.7 401 49.4
MELO3C018646.2 Cucumis melo HOM05D004981 ORTHO05D005635 2.1e-73 280.4 418 49.8
CDE10G0645 Ceratophyllum demersum HOM05D004981 ORTHO05D005635 6.0e-73 278.9 417 46.8
Medtr2g008810 Medicago truncatula HOM05D004981 ORTHO05D005635 7.9e-73 278.5 377 52.8
GSVIVG01029180001 Vitis vinifera HOM05D004981 ORTHO05D005635 3.0e-72 276.6 411 49.4
MD05G1045100 Malus domestica HOM05D004981 ORTHO05D005635 8.7e-72 275.0 427 48.7
PGR142G3166 Punica granatum HOM05D004981 ORTHO05D005635 1.5e-71 274.2 413 47.9
Cc02_g21590 Coffea canephora HOM05D004981 ORTHO05D005635 3.3e-71 273.1 404 48.3
CsaV3_7G006460 Cucumis sativus L. HOM05D004981 ORTHO05D005635 4.3e-71 272.7 416 48.3
Dinv24195 Davidia involucrata HOM05D004981 ORTHO05D005635 9.6e-71 271.6 407 49.6
Lj6g0025255 Lotus japonicus HOM05D004981 ORTHO05D005635 1.3e-70 271.2 427 46.1
TWI59G1067 Tripterygium wilfordii HOM05D004981 ORTHO05D005635 1.3e-70 271.2 399 49.4
Manes.06G012400 Manihot esculenta HOM05D004981 ORTHO05D005635 2.1e-70 270.4 419 48.9
TAR114G0002 Trochodendron aralioides HOM05D004981 ORTHO05D005635 2.1e-70 270.4 331 52.3
Ca_00133_v3 Cicer arietinum L. HOM05D004981 ORTHO05D005635 2.4e-69 266.9 405 49.6
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 4.0e-69 266.2 400 48.0
Duzib132G0770 Durio zibethinus HOM05D004981 ORTHO05D005635 6.9e-69 265.4 420 47.4
Aqoxy6G00803 Aquilegia oxysepala HOM05D004981 ORTHO05D005635 2.9e-67 260.0 388 49.5
Gohir.A03G173700 Gossypium hirsutum HOM05D004981 ORTHO05D005635 2.9e-67 260.0 405 46.2
ClCG09G015370 Citrullus lanatus HOM05D004981 ORTHO05D005635 3.8e-67 259.6 418 47.4
Phvul.006G206700 Phaseolus vulgaris HOM05D004981 ORTHO05D005635 3.8e-67 259.6 379 52.2
QL11p020696 Quercus lobata HOM05D004981 ORTHO05D005635 3.8e-67 259.6 395 45.1
TPR.G9514 Trifolium pratense HOM05D004981 ORTHO05D005635 4.9e-67 259.2 341 54.8
Rhsim05G0107500 Rhododendron simsii HOM05D004981 ORTHO05D005635 8.4e-67 258.5 440 43.6
Rhsim05G0107600 Rhododendron simsii HOM05D004981 ORTHO05D005635 8.4e-67 258.5 369 46.6
arahy.Tifrunner.gnm1.ann1.NXB9BB Arachis hypogaea HOM05D004981 ORTHO05D005635 1.1e-66 258.1 417 47.2
Gohir.D13G054600 Gossypium hirsutum HOM05D004981 ORTHO05D005635 1.4e-66 257.7 419 47.3
Gorai.013G061400 Gossypium raimondii HOM05D004981 ORTHO05D005635 1.9e-66 257.3 419 47.3
Cfa005605 Carpinus fangiana HOM05D004981 ORTHO05D005635 2.4e-66 256.9 387 43.7
Gohir.A13G067000 Gossypium hirsutum HOM05D004981 ORTHO05D005635 5.5e-66 255.8 418 47.1
CiPaw.06G153000 Carya illinoinensis HOM05D004981 ORTHO05D005635 9.3e-66 255.0 351 46.7
CAN.G274.6 Capsicum annuum HOM05D004981 ORTHO05D005635 1.2e-65 254.6 393 49.1
Thecc.02G139100 Theobroma cacao HOM05D004981 ORTHO05D005635 2.1e-65 253.8 426 46.7
arahy.Tifrunner.gnm1.ann1.NS4PA6 Arachis hypogaea HOM05D004981 ORTHO05D005635 2.7e-65 253.4 417 46.5
AUR62010122 Chenopodium quinoa HOM05D004981 ORTHO05D005635 2.7e-65 253.4 399 49.1
Prupe.8G061500 Prunus persica HOM05D004981 ORTHO05D005635 2.7e-65 253.4 386 45.6
Sopen04g004240 Solanum pennellii HOM05D004981 ORTHO05D005635 2.7e-65 253.4 403 46.9
Gorai.005G219800 Gossypium raimondii HOM05D004981 ORTHO05D005635 7.9e-65 251.9 407 47.7
Solyc04g009060.4 Solanum lycopersicum HOM05D004981 ORTHO05D005635 7.9e-65 251.9 403 46.7
PGSC0003DMG400011507 Solanum tuberosum HOM05D004981 ORTHO05D005635 1.3e-64 251.1 403 47.4
Atru.chr5.2124 Acer truncatum HOM05D004981 ORTHO05D005635 1.8e-64 250.8 426 45.3
VMungo0540G0644 Vigna mungo HOM05D004981 ORTHO05D005635 1.8e-64 250.8 395 47.1
Migut.B00612 Erythranthe guttata HOM05D004981 ORTHO05D005635 3.9e-64 249.6 384 48.4
Gohir.D02G196800 Gossypium hirsutum HOM05D004981 ORTHO05D005635 5.1e-64 249.2 407 47.2
Hma1.2p1_0704F.1_g206680 Hydrangea macrophylla HOM05D004981 ORTHO05D005635 5.1e-64 249.2 348 50.6
Lalb_Chr20g0123041 Lupinus albus HOM05D004981 ORTHO05D005635 1.1e-63 248.1 413 47.0
HanXRQChr16g0514321 Helianthus annuus HOM05D004981 ORTHO05D005635 3.3e-63 246.5 390 48.2
Oeu047361.1 Olea europaea HOM05D004981 ORTHO05D005635 1.6e-62 244.2 381 43.0
Lsat_1_v5_gn_5_107300 Lactuca sativa HOM05D004981 ORTHO05D005635 3.7e-62 243.0 381 48.3
EL10Ac9g21471 Beta vulgaris HOM05D004981 ORTHO05D005635 1.1e-61 241.5 399 49.1
ECA234G4021 Erigeron canadensis HOM05D004981 ORTHO05D005635 9.0e-61 238.4 388 48.5
Potri.001G205700 Populus trichocarpa HOM05D004981 ORTHO05D005635 1.5e-60 237.7 419 43.9
Psat1g216680 Pisum sativum HOM05D004981 ORTHO05D005635 2.0e-60 237.3 340 45.6
Potri.003G023700 Populus trichocarpa HOM05D004981 ORTHO05D005635 3.4e-60 236.5 397 46.1
Cpa.g.sc49.24 Carica papaya HOM05D004981 ORTHO05D005635 4.5e-60 236.1 338 44.1
Glyma.08G179200 Glycine max HOM05D004981 ORTHO05D005635 7.6e-60 235.3 423 44.0
Glyma.15G053300 Glycine max HOM05D004981 ORTHO05D005635 1.3e-59 234.6 423 42.8
ATR0753G166 Amborella trichopoda HOM05D004981 ORTHO05D005635 1.7e-59 234.2 449 40.3
COL.COLO4_24958 Corchorus olitorius HOM05D004981 ORTHO05D005635 4.9e-59 232.6 349 43.3
Zm00001eb311320 Zea mays HOM05D004981 ORTHO05D005635 4.9e-59 232.6 411 44.5
DCAR_021855 Daucus carota HOM05D004981 ORTHO05D005635 6.5e-59 232.3 360 44.2
Sc20g0002060 Simmondsia chinensis HOM05D004981 ORTHO05D005635 2.5e-58 230.3 380 42.9
FAN18G1425 Fragaria x ananassa HOM05D004981 ORTHO05D005635 5.5e-58 229.2 414 47.1
RcHm_v2.0_Chr7g0191681 Rosa chinensis HOM05D004981 ORTHO05D005635 7.1e-58 228.8 400 45.5
Duzib248G0633 Durio zibethinus HOM05D004981 ORTHO05D005635 9.3e-58 228.4 377 41.6
Lj5A239G83 Lonicera japonica HOM05D004981 ORTHO05D005635 9.3e-58 228.4 278 50.4
FAN04G0403 Fragaria x ananassa HOM05D004981 ORTHO05D005635 2.1e-57 227.3 417 46.5
Peaxi162Scf00152g01024 Petunia axillaris HOM05D004981 ORTHO05D005635 2.7e-57 226.9 342 44.4
SGA_v2.0_scaffold83G26298 Striga asiatica HOM05D004981 ORTHO05D005635 2.7e-57 226.9 423 42.6
Prupe.5G160300 Prunus persica HOM05D004981 ORTHO05D005635 3.5e-57 226.5 399 48.1
Ciclev10025761m.g Citrus clementina HOM05D004981 ORTHO05D005635 6.0e-57 225.7 414 43.2
vmacro19928 Vaccinium macrocarpon HOM05D004981 ORTHO05D005635 7.9e-57 225.3 505 39.8
Nitab4.5_0008051g0010 Nicotiana tabacum HOM05D004981 ORTHO05D005635 1.0e-56 224.9 341 44.9
MD14G1166200 Malus domestica HOM05D004981 ORTHO05D005635 1.8e-56 224.2 387 49.1
FvH4_5g07000 Fragaria vesca HOM05D004981 ORTHO05D005635 5.7e-55 219.2 414 47.6
SalBow5G0436 Salvia bowleyana HOM05D004981 ORTHO05D005635 1.3e-54 218.0 374 44.4
Os09g0372400 Oryza sativa ssp. japonica HOM05D004981 ORTHO05D005635 1.6e-54 217.6 329 49.2
SEGI_39436 Sequoiadendron giganteum HOM05D004981 ORTHO05D005635 2.8e-54 216.9 367 40.1
Nitab4.5_0000480g0020 Nicotiana tabacum HOM05D004981 ORTHO05D005635 1.1e-53 214.9 325 40.3
Aa31LG3G17630 Aethionema arabicum HOM05D004981 ORTHO05D005635 1.8e-53 214.2 380 42.9
AUR62013118 Chenopodium quinoa HOM05D004981 ORTHO05D005635 2.4e-53 213.8 430 40.5
Sp6g33940 Schrenkiella parvula HOM05D004981 ORTHO05D005635 2.6e-52 210.3 385 43.9
MSTRG.20297 Avicennia marina HOM05D004981 ORTHO05D005635 5.9e-52 209.1 265 48.7
Eucgr.I02666 Eucalyptus grandis HOM05D004981 ORTHO05D005635 7.7e-52 208.8 260 51.2
FAN08G0200 Fragaria x ananassa HOM05D004981 ORTHO05D005635 7.7e-52 208.8 418 43.5
A10p27880 Brassica napus HOM05D004981 ORTHO05D005635 1.3e-51 208.0 372 43.0
BraA10t44837Z Brassica rapa HOM05D004981 ORTHO05D005635 1.3e-51 208.0 372 43.3
THA.LOC104818438 Tarenaya hassleriana HOM05D004981 ORTHO05D005635 3.8e-51 206.5 408 42.2
Oeu011769.5 Olea europaea HOM05D004981 ORTHO05D005635 5.0e-51 206.1 408 37.5
Sabra01G0158000 Salix brachista HOM05D004981 ORTHO05D005635 2.5e-50 203.8 403 38.0
BolC9t59557H Brassica oleracea HOM05D004981 ORTHO05D005635 5.5e-50 202.6 331 41.1
Pp3c22_4170 Physcomitrium patens HOM05D004981 ORTHO05D005635 4.6e-49 199.5 393 41.5
C09p67980 Brassica napus HOM05D004981 ORTHO05D005635 6.1e-49 199.1 331 40.8
Dinv09034 Davidia involucrata HOM05D004981 ORTHO05D005635 6.1e-49 199.1 246 48.4
Hund00058 Selenicereus undatus HOM05D004981 ORTHO05D005635 6.7e-48 195.7 344 44.5
BcaB08g37209 Brassica carinata HOM05D004981 ORTHO05D005635 1.9e-47 194.1 350 43.1
TPR.G21754 Trifolium pratense HOM05D004981 ORTHO05D005635 2.2e-46 190.7 237 49.8
AL6G19780 Arabidopsis lyrata HOM05D004981 ORTHO05D005635 4.1e-45 186.4 378 43.9
HPP92_013108 Vanilla planifolia HOM05D004981 ORTHO05D005635 2.6e-44 183.7 235 47.2
AT5G09390 Arabidopsis thaliana HOM05D004981 ORTHO05D005635 7.7e-44 182.2 380 40.8
Carub.0006s0794 Capsella rubella HOM05D004981 ORTHO05D005635 2.2e-43 180.6 382 44.2
Mapoly0041s0053 Marchantia polymorpha HOM05D004981 ORTHO05D005635 2.2e-43 180.6 418 41.9
Thhalv10013574m.g Eutrema salsugineum HOM05D004981 ORTHO05D005635 6.5e-43 179.1 385 43.6
Sabra03G0014800 Salix brachista HOM05D004981 ORTHO05D005635 1.1e-42 178.3 235 48.1
CARHR204020 Cardamine hirsuta HOM05D004981 ORTHO05D005635 1.5e-39 167.9 356 39.6
COL.COLO4_15286 Corchorus olitorius HOM05D004981 ORTHO05D005635 4.4e-39 166.4 253 45.8
Lj1g0016172 Lotus japonicus HOM05D004981 ORTHO05D005635 7.4e-39 165.6 336 35.4
Medtr5g017190 Medicago truncatula HOM05D004981 ORTHO05D005635 4.8e-38 162.9 243 46.1
CBR_g31506 Chara braunii HOM05D004981 ORTHO05D005635 1.3e-35 154.8 291 36.8
FAN08G2142 Fragaria x ananassa HOM05D004981 ORTHO05D005635 5.0e-35 152.9 391 38.9
HPP92_013085 Vanilla planifolia HOM05D004981 ORTHO05D005635 1.6e-33 147.9 309 38.5
SMO356G0631 Selaginella moellendorffii HOM05D004981 ORTHO05D005635 1.4e-32 144.8 265 39.2
AagrBONN_evm.TU.Sc2ySwM_117.1804 Anthoceros agrestis HOM05D004981 ORTHO05D005635 6.7e-32 142.5 218 40.4
FAN21G1455 Fragaria x ananassa HOM05D004981 ORTHO05D005635 3.8e-27 126.7 247 45.3
Ah.01g009580 Amaranthus hybridus HOM05D004981 ORTHO05D005635 1.8e-24 117.9 268 36.6
Ah.01g009610 Amaranthus hybridus HOM05D004981 ORTHO05D005635 2.6e-23 114.0 148 50.7
VMungo1383G1991 Vigna mungo HOM05D004981 ORTHO05D005635 2.3e-16 90.9 147 40.1
FvH4_4g13240 Fragaria vesca HOM05D004981 ORTHO05D005635 5.7e-15 86.3 159 38.4
FAN12G0625 Fragaria x ananassa HOM05D004981 ORTHO05D005635 4.8e-14 83.2 104 46.2
RcHm_v2.0_Chr7g0224681 Rosa chinensis HOM05D004981 ORTHO05D005635 4.8e-14 83.2 205 35.6
PRCOL_00000241 Prasinoderma coloniale HOM05D004981 ORTHO05D005635 3.1e-13 80.5 220 31.8
Lsat_1_v5_gn_5_82561 Lactuca sativa HOM05D004981 ORTHO05D005635 7.7e-12 75.9 83 54.2
VMungo1383G0650 Vigna mungo HOM05D004981 ORTHO05D005635 3.8e-11 73.6 133 39.1
Thecc.06G050700 Theobroma cacao HOM05D004981 ORTHO05D005635 1.1e-10 72.0 88 43.2
C05p07220 Brassica napus HOM05D001624 ORTHO05D005635 1.0e-08 65.5 149 32.2
Dinv07233 Davidia involucrata HOM05D004981 ORTHO05D005635 1.4e-08 65.1 68 52.9
Cre06.g299450 Chlamydomonas reinhardtii HOM05D004981 ORTHO05D005635 8.9e-08 62.4 99 39.4


User provided reference genes

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