Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO765G0043 Papaver somniferum HOM05D005608 ORTHO05D302623 3.4e-49 198.0 97 100.0
MD12G1082500 Malus domestica HOM05D005608 ORTHO05D007543 2.9e-08 62.0 39 76.9
MD14G1077300 Malus domestica HOM05D005608 ORTHO05D007543 1.1e-07 60.1 47 66.0
Cc06_g18100 Coffea canephora HOM05D005608 ORTHO05D007543 1.9e-07 59.3 43 72.1
Lj1A1125T63 Lonicera japonica HOM05D005608 ORTHO05D007543 1.9e-07 59.3 47 63.8
SalBow6G3992 Salvia bowleyana HOM05D005608 ORTHO05D007543 1.9e-07 59.3 39 76.9
SalBow6G4364 Salvia bowleyana HOM05D005608 ORTHO05D007543 1.9e-07 59.3 39 76.9
CSS0026365 Camellia sinensis var. sinensis HOM05D005608 ORTHO05D007543 2.5e-07 58.9 49 61.2
Lsat_1_v5_gn_8_82180 Lactuca sativa HOM05D005608 ORTHO05D007543 2.5e-07 58.9 48 60.4
Oeu017928.1 Olea europaea HOM05D005608 ORTHO05D007543 2.5e-07 58.9 39 76.9
Hund24681 Selenicereus undatus HOM05D005608 ORTHO05D007543 2.5e-07 58.9 44 70.5
TAR369G0194 Trochodendron aralioides HOM05D005608 ORTHO05D007543 2.5e-07 58.9 48 62.5
TAR369G0715 Trochodendron aralioides HOM05D005608 ORTHO05D007543 2.5e-07 58.9 48 62.5
TAR633G2234 Trochodendron aralioides HOM05D005608 ORTHO05D007543 2.5e-07 58.9 48 62.5
Rhsim03G0028900 Rhododendron simsii HOM05D005608 ORTHO05D007543 3.2e-07 58.5 39 74.4
COL.COLO4_32782 Corchorus olitorius HOM05D005608 ORTHO05D007543 4.2e-07 58.2 47 66.0
Eucgr.K02019 Eucalyptus grandis HOM05D005608 ORTHO05D007543 4.2e-07 58.2 46 63.0
Ciclev10005572m.g Citrus clementina HOM05D005608 ORTHO05D007543 5.5e-07 57.8 39 74.4
MELO3C026333.2 Cucumis melo HOM05D005608 ORTHO05D007543 5.5e-07 57.8 47 63.8
PSO339G6269 Papaver somniferum HOM05D005608 ORTHO05D007543 5.5e-07 57.8 47 66.0
PSO384G3225 Papaver somniferum HOM05D005608 ORTHO05D007543 5.5e-07 57.8 47 66.0
SEGI_13354 Sequoiadendron giganteum HOM05D005608 ORTHO05D007543 5.5e-07 57.8 48 66.7
Actinidia39202 Actinidia chinensis HOM05D005608 ORTHO05D007543 7.2e-07 57.4 39 71.8
AUR62026096 Chenopodium quinoa HOM05D005608 ORTHO05D007543 7.2e-07 57.4 42 66.7
Migut.J01725 Erythranthe guttata HOM05D005608 ORTHO05D007543 7.2e-07 57.4 39 74.4
Lalb_Chr06g0173501 Lupinus albus HOM05D005608 ORTHO05D007543 7.2e-07 57.4 47 66.0
MBI19_g29889_MAGBIO Magnolia biondii HOM05D005608 ORTHO05D007543 7.2e-07 57.4 41 65.9
TPR.G19657 Trifolium pratense HOM05D005608 ORTHO05D007543 7.2e-07 57.4 48 68.8
arahy.Tifrunner.gnm1.ann1.QZL5XH Arachis hypogaea HOM05D005608 ORTHO05D007543 9.3e-07 57.0 41 68.3
CANSAT80G0897 Cannabis sativa HOM05D005608 ORTHO05D007543 9.3e-07 57.0 39 74.4
CsaV3_4G027510 Cucumis sativus L. HOM05D005608 ORTHO05D007543 9.3e-07 57.0 46 65.2
Duzib106G2070 Durio zibethinus HOM05D005608 ORTHO05D007543 9.3e-07 57.0 47 63.8
Prupe.7G053400 Prunus persica HOM05D005608 ORTHO05D007543 9.3e-07 57.0 39 74.4
MSTRG.19838 Avicennia marina HOM05D005608 ORTHO05D007543 1.2e-06 56.6 47 63.8
Cfa016779 Carpinus fangiana HOM05D005608 ORTHO05D007543 1.2e-06 56.6 39 71.8
Haze_19791 Corylus avellana HOM05D005608 ORTHO05D007543 1.2e-06 56.6 39 71.8
Haze_19795 Corylus avellana HOM05D005608 ORTHO05D007543 1.2e-06 56.6 39 71.8
Dinv39657 Davidia involucrata HOM05D005608 ORTHO05D007543 1.2e-06 56.6 39 69.2
TPR.G19661 Trifolium pratense HOM05D005608 ORTHO05D007543 1.2e-06 56.6 47 68.1
unitig_21.g20519 Utricularia gibba HOM05D005608 ORTHO05D007543 1.2e-06 56.6 39 74.4
vmacro21968 Vaccinium macrocarpon HOM05D005608 ORTHO05D007543 1.2e-06 56.6 39 69.2
CAN.G676.7 Capsicum annuum HOM05D005608 ORTHO05D007543 1.6e-06 56.2 39 71.8
Pp3c11_8660 Physcomitrium patens HOM05D005608 ORTHO05D007543 1.6e-06 56.2 48 58.3
Potri.006G047000 Populus trichocarpa HOM05D005608 ORTHO05D007543 1.6e-06 56.2 47 61.7
SGA_v2.0_scaffold273G46432 Striga asiatica HOM05D005608 ORTHO05D007543 1.6e-06 56.2 47 61.7
Thecc.05G148100 Theobroma cacao HOM05D005608 ORTHO05D007543 1.6e-06 56.2 47 61.7
Atru.chr1.1230 Acer truncatum HOM05D005608 ORTHO05D007543 2.1e-06 55.8 39 71.8
Aqoxy2G00245 Aquilegia oxysepala HOM05D005608 ORTHO05D007543 2.1e-06 55.8 47 63.8
MSTRG.26133 Avicennia marina HOM05D005608 ORTHO05D007543 2.1e-06 55.8 39 71.8
ClCG04G003700 Citrullus lanatus HOM05D005608 ORTHO05D007543 2.1e-06 55.8 47 61.7
Hma1.2p1_0110F.1_g052840 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 2.1e-06 55.8 39 69.2
Hma1.2p1_1997F.1_g310445 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 2.1e-06 55.8 39 69.2
Nitab4.5_0000826g0060 Nicotiana tabacum HOM05D005608 ORTHO05D007543 2.1e-06 55.8 39 71.8
Nitab4.5_0001618g0150 Nicotiana tabacum HOM05D005608 ORTHO05D007543 2.1e-06 55.8 39 71.8
QL07p003736 Quercus lobata HOM05D005608 ORTHO05D007543 2.1e-06 55.8 39 71.8
Solyc04g016360.3 Solanum lycopersicum HOM05D005608 ORTHO05D007543 2.1e-06 55.8 39 71.8
Sopen04g008450 Solanum pennellii HOM05D005608 ORTHO05D007543 2.1e-06 55.8 39 71.8
PGSC0003DMG401012699 Solanum tuberosum HOM05D005608 ORTHO05D007543 2.1e-06 55.8 39 71.8
arahy.Tifrunner.gnm1.ann1.RCN63F Arachis hypogaea HOM05D005608 ORTHO05D007543 2.7e-06 55.5 39 69.2
CANSAT80G2626 Cannabis sativa HOM05D005608 ORTHO05D007543 2.7e-06 55.5 39 71.8
Cpa.g.sc182.15 Carica papaya HOM05D005608 ORTHO05D007543 2.7e-06 55.5 39 69.2
Gohir.A01G193800 Gossypium hirsutum HOM05D005608 ORTHO05D007543 2.7e-06 55.5 39 69.2
Gohir.D01G184100 Gossypium hirsutum HOM05D005608 ORTHO05D007543 2.7e-06 55.5 39 69.2
Gorai.002G227600 Gossypium raimondii HOM05D005608 ORTHO05D007543 2.7e-06 55.5 39 69.2
GSVIVG01033232001 Vitis vinifera HOM05D005608 ORTHO05D007543 2.7e-06 55.5 47 59.6
AUR62024510 Chenopodium quinoa HOM05D005608 ORTHO05D007543 3.6e-06 55.1 39 69.2
ECA236G2378 Erigeron canadensis HOM05D005608 ORTHO05D007543 3.6e-06 55.1 39 66.7
Manes.08G052000 Manihot esculenta HOM05D005608 ORTHO05D007543 3.6e-06 55.1 39 69.2
Phvul.007G250500 Phaseolus vulgaris HOM05D005608 ORTHO05D007543 3.6e-06 55.1 47 57.4
Aa31LG1G23580 Aethionema arabicum HOM05D005608 ORTHO05D007543 4.6e-06 54.7 39 69.2
CiPaw.09G040300 Carya illinoinensis HOM05D005608 ORTHO05D007543 4.6e-06 54.7 47 61.7
Eucgr.K01713 Eucalyptus grandis HOM05D005608 ORTHO05D007543 4.6e-06 54.7 39 69.2
Thhalv10017045m.g Eutrema salsugineum HOM05D005608 ORTHO05D007543 4.6e-06 54.7 49 57.1
HanXRQChr04g0125051 Helianthus annuus HOM05D005608 ORTHO05D007543 4.6e-06 54.7 39 66.7
Sabra06G0032700 Salix brachista HOM05D005608 ORTHO05D007543 4.6e-06 54.7 47 59.6
HPP92_001434 Vanilla planifolia HOM05D005608 ORTHO05D007543 4.6e-06 54.7 39 69.2
EL10Ac3g07137 Beta vulgaris HOM05D005608 ORTHO05D007543 6.1e-06 54.3 39 69.2
Carub.0004s2382 Capsella rubella HOM05D005608 ORTHO05D007543 6.1e-06 54.3 39 66.7
Zm00001eb363240 Zea mays HOM05D005608 ORTHO05D007543 6.1e-06 54.3 42 61.9
AL4G39630 Arabidopsis lyrata HOM05D005608 ORTHO05D007543 7.9e-06 53.9 39 66.7
AT2G41530 Arabidopsis thaliana HOM05D005608 ORTHO05D007543 7.9e-06 53.9 39 66.7
CARHR136660 Cardamine hirsuta HOM05D005608 ORTHO05D007543 7.9e-06 53.9 39 66.7
FvH4_6g24520 Fragaria vesca HOM05D005608 ORTHO05D007543 7.9e-06 53.9 47 59.6
FAN02G1028 Fragaria x ananassa HOM05D005608 ORTHO05D007543 7.9e-06 53.9 47 59.6
FAN05G0975 Fragaria x ananassa HOM05D005608 ORTHO05D007543 7.9e-06 53.9 47 59.6
FAN14G1555 Fragaria x ananassa HOM05D005608 ORTHO05D007543 7.9e-06 53.9 47 59.6
Medtr1g052175 Medicago truncatula HOM05D005608 ORTHO05D007543 7.9e-06 53.9 49 63.3
Medtr4g008660 Medicago truncatula HOM05D005608 ORTHO05D007543 7.9e-06 53.9 49 63.3
Nn2g15128 Nelumbo nucifera HOM05D005608 ORTHO05D007543 7.9e-06 53.9 39 64.1
Sp4g23810 Schrenkiella parvula HOM05D005608 ORTHO05D007543 7.9e-06 53.9 39 66.7
Sed0023334 Sechium edule HOM05D005608 ORTHO05D007543 7.9e-06 53.9 47 59.6


User provided reference genes

Program Settings