Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G5312 Papaver somniferum HOM05D004061 ORTHO05D004693 3.0e-128 461.8 228 100.0
PSO699G0012 Papaver somniferum HOM05D004061 ORTHO05D004693 3.4e-68 262.3 222 60.8
TAR633G1989 Trochodendron aralioides HOM05D004061 ORTHO05D004693 1.5e-50 203.8 208 52.9
Medtr7g100150 Medicago truncatula HOM05D004061 ORTHO05D004693 1.4e-48 197.2 210 50.0
Nitab4.5_0006252g0020 Nicotiana tabacum HOM05D004061 ORTHO05D004693 2.3e-48 196.4 205 50.7
Nitab4.5_0000643g0160 Nicotiana tabacum HOM05D004061 ORTHO05D004693 5.2e-48 195.3 208 50.0
Psat0s1952g0040 Pisum sativum HOM05D004061 ORTHO05D004693 5.2e-48 195.3 210 49.0
Ca_08806_v3 Cicer arietinum L. HOM05D004061 ORTHO05D004693 2.6e-47 193.0 210 48.1
TPR.G21459 Trifolium pratense HOM05D004061 ORTHO05D004693 5.7e-47 191.8 210 49.0
MBI05_g22082_MAGBIO Magnolia biondii HOM05D004061 ORTHO05D004693 7.5e-47 191.4 194 52.6
Nitab4.5_0000202g0310 Nicotiana tabacum HOM05D004061 ORTHO05D004693 9.8e-47 191.0 203 50.7
vmacro20095 Vaccinium macrocarpon HOM05D004061 ORTHO05D004693 2.8e-46 189.5 193 52.3
HanXRQChr13g0392181 Helianthus annuus HOM05D004061 ORTHO05D004693 3.7e-46 189.1 200 53.0
Lalb_Chr20g0113041 Lupinus albus HOM05D004061 ORTHO05D004693 3.7e-46 189.1 205 46.3
Oeu035162.1 Olea europaea HOM05D004061 ORTHO05D004693 4.8e-46 188.7 214 47.2
Duzib128G0701 Durio zibethinus HOM05D004061 ORTHO05D004693 8.3e-46 188.0 195 51.8
Glyma.19G176300 Glycine max HOM05D004061 ORTHO05D004693 8.3e-46 188.0 204 48.5
CANSAT80G1299 Cannabis sativa HOM05D004061 ORTHO05D004693 1.1e-45 187.6 206 47.6
Migut.L01642 Erythranthe guttata HOM05D004061 ORTHO05D004693 1.4e-45 187.2 207 48.8
Dinv35674 Davidia involucrata HOM05D004061 ORTHO05D004693 1.8e-45 186.8 194 52.6
Lalb_Chr25g0289361 Lupinus albus HOM05D004061 ORTHO05D004693 1.8e-45 186.8 204 46.6
CiPaw.10G139500 Carya illinoinensis HOM05D004061 ORTHO05D004693 2.4e-45 186.4 210 46.2
Glyma.03G175700 Glycine max HOM05D004061 ORTHO05D004693 3.1e-45 186.0 210 49.0
Nn2g12823 Nelumbo nucifera HOM05D004061 ORTHO05D004693 5.4e-45 185.3 202 50.5
Actinidia05286 Actinidia chinensis HOM05D004061 ORTHO05D004693 7.0e-45 184.9 208 50.0
CiPaw.09G185500 Carya illinoinensis HOM05D004061 ORTHO05D004693 9.1e-45 184.5 205 47.3
ATR0594G174 Amborella trichopoda HOM05D004061 ORTHO05D004693 1.2e-44 184.1 207 47.8
Potri.016G081900 Populus trichocarpa HOM05D004061 ORTHO05D004693 1.2e-44 184.1 208 47.6
GSVIVG01025578001 Vitis vinifera HOM05D004061 ORTHO05D004693 1.2e-44 184.1 217 47.9
Cfa017465 Carpinus fangiana HOM05D004061 ORTHO05D004693 2.0e-44 183.3 153 55.6
Lj3A975G70 Lonicera japonica HOM05D004061 ORTHO05D004693 2.0e-44 183.3 207 48.8
Lj1g0024664 Lotus japonicus HOM05D004061 ORTHO05D004693 2.0e-44 183.3 205 49.8
Ciclev10012656m.g Citrus clementina HOM05D004061 ORTHO05D004693 3.5e-44 182.6 191 48.7
Rhsim05G0184700 Rhododendron simsii HOM05D004061 ORTHO05D004693 3.5e-44 182.6 200 50.5
vmacro08681 Vaccinium macrocarpon HOM05D004061 ORTHO05D004693 4.5e-44 182.2 190 53.2
VMungo1383G1764 Vigna mungo HOM05D004061 ORTHO05D004693 5.9e-44 181.8 208 49.0
ClCG04G008650 Citrullus lanatus HOM05D004061 ORTHO05D004693 7.7e-44 181.4 206 49.0
Manes.08G000500 Manihot esculenta HOM05D004061 ORTHO05D004693 7.7e-44 181.4 203 47.8
PSO339G1720 Papaver somniferum HOM05D004061 ORTHO05D004693 2.9e-43 179.5 200 51.0
arahy.Tifrunner.gnm1.ann1.9VFE0J Arachis hypogaea HOM05D004061 ORTHO05D004693 6.5e-43 178.3 206 46.1
Haze_20694 Corylus avellana HOM05D004061 ORTHO05D004693 6.5e-43 178.3 215 47.4
QL07p045968 Quercus lobata HOM05D004061 ORTHO05D004693 6.5e-43 178.3 206 48.5
Cc06_g03260 Coffea canephora HOM05D004061 ORTHO05D004693 8.5e-43 177.9 204 43.6
Duzib093G0371 Durio zibethinus HOM05D004061 ORTHO05D004693 1.1e-42 177.6 192 50.0
Nn2g10562 Nelumbo nucifera HOM05D004061 ORTHO05D004693 1.1e-42 177.6 193 51.3
unitig_8.g4322 Utricularia gibba HOM05D004061 ORTHO05D004693 1.1e-42 177.6 209 46.4
MSTRG.19117 Avicennia marina HOM05D004061 ORTHO05D004693 1.9e-42 176.8 207 44.4
Sabra16G0089600 Salix brachista HOM05D004061 ORTHO05D004693 4.2e-42 175.6 245 40.0
Solyc09g005960.4 Solanum lycopersicum HOM05D004061 ORTHO05D004693 5.5e-42 175.3 204 45.6
Thecc.05G049300 Theobroma cacao HOM05D004061 ORTHO05D004693 5.5e-42 175.3 198 47.5
Dinv35675 Davidia involucrata HOM05D004061 ORTHO05D004693 7.2e-42 174.9 152 58.6
arahy.Tifrunner.gnm1.ann1.6R95LH Arachis hypogaea HOM05D004061 ORTHO05D004693 9.4e-42 174.5 206 45.1
ECA248G1662 Erigeron canadensis HOM05D004061 ORTHO05D004693 1.2e-41 174.1 199 48.2
PSO384G5009 Papaver somniferum HOM05D004061 ORTHO05D004693 1.2e-41 174.1 200 50.0
Peaxi162Scf00597g00310 Petunia axillaris HOM05D004061 ORTHO05D004693 1.2e-41 174.1 224 44.2
Sopen09g001820 Solanum pennellii HOM05D004061 ORTHO05D004693 1.2e-41 174.1 204 46.1
Aqoxy4G03101 Aquilegia oxysepala HOM05D004061 ORTHO05D004693 1.6e-41 173.7 203 49.8
Sed0004679 Sechium edule HOM05D004061 ORTHO05D004693 1.6e-41 173.7 192 49.0
Peaxi162Scf00604g00010 Petunia axillaris HOM05D004061 ORTHO05D004693 4.7e-41 172.2 203 46.8
Glyma.13G134900 Glycine max HOM05D004061 ORTHO05D004693 6.1e-41 171.8 200 46.0
TWI74G1169 Tripterygium wilfordii HOM05D004061 ORTHO05D004693 8.0e-41 171.4 209 46.9
MD12G1131500 Malus domestica HOM05D004061 ORTHO05D004693 1.0e-40 171.0 189 47.6
Gohir.A01G218200 Gossypium hirsutum HOM05D004061 ORTHO05D004693 1.4e-40 170.6 199 46.2
Sc20g0004290 Simmondsia chinensis HOM05D004061 ORTHO05D004693 2.3e-40 169.9 209 44.5
AUR62044395 Chenopodium quinoa HOM05D004061 ORTHO05D004693 3.0e-40 169.5 200 47.5
arahy.Tifrunner.gnm1.ann1.Y28VT2 Arachis hypogaea HOM05D004061 ORTHO05D004693 4.0e-40 169.1 194 46.4
HanXRQChr11g0349611 Helianthus annuus HOM05D004061 ORTHO05D004693 8.8e-40 167.9 211 42.7
Hund12072 Selenicereus undatus HOM05D004061 ORTHO05D004693 1.2e-39 167.5 153 54.9
MD04G1110000 Malus domestica HOM05D004061 ORTHO05D004693 1.5e-39 167.2 193 46.6
PGSC0003DMG400011053 Solanum tuberosum HOM05D004061 ORTHO05D004693 1.5e-39 167.2 199 46.7
EL10Ac7g17278 Beta vulgaris HOM05D004061 ORTHO05D004693 2.0e-39 166.8 207 46.4
Lsat_1_v5_gn_1_54740 Lactuca sativa HOM05D004061 ORTHO05D004693 2.0e-39 166.8 197 45.7
Lj2C103T21 Lonicera japonica HOM05D004061 ORTHO05D004693 3.4e-39 166.0 192 47.9
arahy.Tifrunner.gnm1.ann1.H9GTJP Arachis hypogaea HOM05D004061 ORTHO05D004693 4.4e-39 165.6 212 42.9
Sed0004085 Sechium edule HOM05D004061 ORTHO05D004693 4.4e-39 165.6 209 42.6
TWI77G0888 Tripterygium wilfordii HOM05D004061 ORTHO05D004693 4.4e-39 165.6 154 55.8
Glyma.10G046900 Glycine max HOM05D004061 ORTHO05D004693 7.5e-39 164.9 208 45.2
Prupe.6G245800 Prunus persica HOM05D004061 ORTHO05D004693 9.8e-39 164.5 151 53.6
Gohir.D01G207100 Gossypium hirsutum HOM05D004061 ORTHO05D004693 1.3e-38 164.1 221 42.1
Oeu049603.1 Olea europaea HOM05D004061 ORTHO05D004693 1.7e-38 163.7 144 56.2
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 2.8e-38 162.9 186 46.2
PGR004G1528 Punica granatum HOM05D004061 ORTHO05D004693 2.8e-38 162.9 148 54.7
Phvul.007G161100 Phaseolus vulgaris HOM05D004061 ORTHO05D004693 6.3e-38 161.8 206 43.7
HPP92_006587 Vanilla planifolia HOM05D004061 ORTHO05D004693 6.3e-38 161.8 214 43.5
CAN.G435.5 Capsicum annuum HOM05D004061 ORTHO05D004693 1.8e-37 160.2 195 45.1
Solyc10g084500.1 Solanum lycopersicum HOM05D004061 ORTHO05D004693 1.8e-37 160.2 201 44.8
Gorai.002G252200 Gossypium raimondii HOM05D004061 ORTHO05D004693 2.4e-37 159.8 221 41.6
THA.LOC104806513 Tarenaya hassleriana HOM05D004061 ORTHO05D004693 3.1e-37 159.5 198 47.0
CARHR163390 Cardamine hirsuta HOM05D004061 ORTHO05D004693 4.1e-37 159.1 201 46.3
Sopen10g033930 Solanum pennellii HOM05D004061 ORTHO05D004693 4.1e-37 159.1 201 46.3
Aa31LG10G9640 Aethionema arabicum HOM05D004061 ORTHO05D004693 5.4e-37 158.7 195 46.7
Aa31LG10G9670 Aethionema arabicum HOM05D004061 ORTHO05D004693 5.4e-37 158.7 189 47.6
Lj5g0017469 Lotus japonicus HOM05D004061 ORTHO05D004693 9.1e-37 157.9 206 42.2
Carub.0005s2006 Capsella rubella HOM05D004061 ORTHO05D004693 1.6e-36 157.1 202 46.0
Phvul.001G172800 Phaseolus vulgaris HOM05D004061 ORTHO05D004693 1.6e-36 157.1 205 44.4
CsaV3_4G024510 Cucumis sativus L. HOM05D004061 ORTHO05D004693 5.9e-36 155.2 145 53.8
unitig_578.g16044 Utricularia gibba HOM05D004061 ORTHO05D004693 5.9e-36 155.2 191 43.5
MELO3C003083.2 Cucumis melo HOM05D004061 ORTHO05D004693 1.3e-35 154.1 154 51.9
Cpa.g.sc114.23 Carica papaya HOM05D004061 ORTHO05D004693 2.3e-35 153.3 185 44.9
AT3G53490 Arabidopsis thaliana HOM05D004061 ORTHO05D004693 2.9e-35 152.9 199 43.7
Gorai.001G248900 Gossypium raimondii HOM05D004061 ORTHO05D004693 2.9e-35 152.9 196 40.8
SHI12648 Sapria himalayana HOM05D004061 ORTHO05D004693 5.0e-35 152.1 194 42.8
AL5G34410 Arabidopsis lyrata HOM05D004061 ORTHO05D004693 1.1e-34 151.0 219 41.6
Sp5g08850 Schrenkiella parvula HOM05D004061 ORTHO05D004693 1.1e-34 151.0 212 43.4
Atru.chr8.2505 Acer truncatum HOM05D004061 ORTHO05D004693 2.5e-34 149.8 140 57.9
CDE07G0262 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 3.3e-34 149.4 190 43.2
SalBow4G2839 Salvia bowleyana HOM05D004061 ORTHO05D004693 3.3e-34 149.4 139 51.8
Gohir.D13G097300 Gossypium hirsutum HOM05D004061 ORTHO05D004693 4.2e-34 149.1 133 52.6
FvH4_6g14800 Fragaria vesca HOM05D004061 ORTHO05D004693 5.5e-34 148.7 143 53.8
FAN14G1560 Fragaria x ananassa HOM05D004061 ORTHO05D004693 5.5e-34 148.7 143 53.8
Pp3c2_4500 Physcomitrium patens HOM05D004061 ORTHO05D004693 7.2e-34 148.3 209 41.1
SGA_v2.0_scaffold35G14186 Striga asiatica HOM05D004061 ORTHO05D004693 9.5e-34 147.9 131 54.2
TPR.G7552 Trifolium pratense HOM05D004061 ORTHO05D004693 9.5e-34 147.9 183 41.5
HPP92_015408 Vanilla planifolia HOM05D004061 ORTHO05D004693 1.2e-33 147.5 204 41.7
FAN02G3315 Fragaria x ananassa HOM05D004061 ORTHO05D004693 2.8e-33 146.4 143 53.1
Gohir.A13G095435 Gossypium hirsutum HOM05D004061 ORTHO05D004693 2.8e-33 146.4 194 39.7
Os03g0282800 Oryza sativa ssp. japonica HOM05D004061 ORTHO05D004693 3.6e-33 146.0 188 44.7
C06p21460 Brassica napus HOM05D004061 ORTHO05D004693 8.0e-33 144.8 222 41.4
Carub.0006s0148 Capsella rubella HOM05D004061 ORTHO05D004693 8.0e-33 144.8 202 40.1
Medtr1g067320 Medicago truncatula HOM05D004061 ORTHO05D004693 8.0e-33 144.8 198 38.4
RcHm_v2.0_Chr3g0468021 Rosa chinensis HOM05D004061 ORTHO05D004693 8.0e-33 144.8 134 53.7
Thhalv10010698m.g Eutrema salsugineum HOM05D004061 ORTHO05D004693 1.0e-32 144.4 213 42.3
HPP92_026988 Vanilla planifolia HOM05D004061 ORTHO05D004693 1.4e-32 144.1 199 42.2
FAN05G3362 Fragaria x ananassa HOM05D004061 ORTHO05D004693 1.8e-32 143.7 143 52.4
BraA07t29848Z Brassica rapa HOM05D004061 ORTHO05D004693 2.3e-32 143.3 224 41.1
Ca_11436_v3 Cicer arietinum L. HOM05D004061 ORTHO05D004693 2.3e-32 143.3 200 40.5
Sp6g39850 Schrenkiella parvula HOM05D004061 ORTHO05D004693 4.0e-32 142.5 207 40.1
THA.LOC104816298 Tarenaya hassleriana HOM05D004061 ORTHO05D004693 5.2e-32 142.1 130 53.8
Ah.08g212360 Amaranthus hybridus HOM05D004061 ORTHO05D004693 6.8e-32 141.7 135 52.6
A07p21670 Brassica napus HOM05D004061 ORTHO05D004693 6.8e-32 141.7 224 41.5
BolC6t37328H Brassica oleracea HOM05D004061 ORTHO05D004693 8.9e-32 141.4 222 41.0
BcaC08g44627 Brassica carinata HOM05D004061 ORTHO05D004693 1.2e-31 141.0 222 41.0
A10p32990 Brassica napus HOM05D004061 ORTHO05D004693 5.7e-31 138.7 226 38.1
BraA10t45336Z Brassica rapa HOM05D004061 ORTHO05D004693 3.7e-30 136.0 195 40.0
BolC9t60131H Brassica oleracea HOM05D004061 ORTHO05D004693 4.9e-30 135.6 216 38.9
BcaNung03280 Brassica carinata HOM05D004061 ORTHO05D004693 1.1e-29 134.4 217 38.2
Lalb_Chr01g0019101 Lupinus albus HOM05D004061 ORTHO05D004693 1.4e-29 134.0 210 39.0
AT5G02720 Arabidopsis thaliana HOM05D004061 ORTHO05D004693 2.4e-29 133.3 207 38.6
Mapoly0179s0007 Marchantia polymorpha HOM05D004061 ORTHO05D004693 7.0e-29 131.7 155 42.6
Pp3c17_20730 Physcomitrium patens HOM05D004061 ORTHO05D004693 7.0e-29 131.7 136 47.8
Pp3c17_20731 Physcomitrium patens HOM05D004061 ORTHO05D004693 7.0e-29 131.7 136 47.8
Psat6g069360 Pisum sativum HOM05D004061 ORTHO05D004693 9.2e-29 131.3 189 39.7
VMungo0720G0415 Vigna mungo HOM05D004061 ORTHO05D004693 3.5e-28 129.4 248 32.3
Dinv37231 Davidia involucrata HOM05D004061 ORTHO05D004693 1.0e-27 127.9 148 48.6
SMO164G0167 Selaginella moellendorffii HOM05D004061 ORTHO05D004693 2.3e-27 126.7 191 39.3
AagrBONN_evm.TU.Sc2ySwM_117.2779 Anthoceros agrestis HOM05D004061 ORTHO05D004693 5.0e-27 125.6 209 36.4
Aqoxy4G03086 Aquilegia oxysepala HOM05D003496 ORTHO05D003909 1.1e-26 124.4 206 38.8
BraA04t16312Z Brassica rapa HOM05D004061 ORTHO05D004693 1.6e-25 120.6 133 46.6
BolC4t25479H Brassica oleracea HOM05D004061 ORTHO05D004693 2.1e-25 120.2 216 35.2
C04p39050 Brassica napus HOM05D004061 ORTHO05D004693 3.6e-25 119.4 223 35.4
A04p06100 Brassica napus HOM05D004061 ORTHO05D004693 1.4e-24 117.5 133 45.9
BcaC02g09159 Brassica carinata HOM05D004061 ORTHO05D004693 2.3e-24 116.7 138 45.7
CBR_g49836 Chara braunii HOM05D006172 ORTHO05D004693 1.5e-23 114.0 141 44.0
AUR62042140 Chenopodium quinoa HOM05D004061 ORTHO05D004693 2.0e-20 103.6 118 44.9
COL.COLO4_10313 Corchorus olitorius HOM05D004061 ORTHO05D004693 9.5e-18 94.7 61 60.7
vmacro08682 Vaccinium macrocarpon HOM05D004061 ORTHO05D004693 3.6e-17 92.8 67 61.2
C09p73960 Brassica napus HOM05D004061 ORTHO05D004693 3.1e-16 89.7 126 37.3
BcaC06g32007 Brassica carinata HOM05D004061 ORTHO05D004693 4.0e-16 89.4 126 37.3
ATR0594G139 Amborella trichopoda HOM05D004061 ORTHO05D004693 5.2e-16 89.0 63 58.7
BcaB02g08525 Brassica carinata HOM05D004061 ORTHO05D004693 5.2e-16 89.0 141 38.3
SEGI_28610 Sequoiadendron giganteum HOM05D004061 ORTHO05D004693 6.8e-16 88.6 160 28.8
AL6G11960 Arabidopsis lyrata HOM05D004061 ORTHO05D004693 3.7e-14 82.8 125 36.0
Thhalv10016063m.g Eutrema salsugineum HOM05D004061 ORTHO05D004693 2.4e-13 80.1 125 34.4
Zm00001eb012900 Zea mays HOM05D004061 ORTHO05D004693 3.3e-10 69.7 82 46.3
ATR0594G136 Amborella trichopoda HOM05D004061 ORTHO05D004693 5.6e-10 68.9 42 59.5
BcaB02g07781 Brassica carinata HOM05D004061 ORTHO05D004693 1.8e-08 63.9 96 43.8
CARHR210670 Cardamine hirsuta HOM05D004061 ORTHO05D004693 1.8e-08 63.9 70 48.6


User provided reference genes

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