Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G4447 Papaver somniferum HOM05D005969 ORTHO05D007407 1.4e-207 726.1 386 100.0
PSO541G5031 Papaver somniferum HOM05D005969 ORTHO05D007407 2.0e-201 705.7 389 93.8
TAR628G0900 Trochodendron aralioides HOM05D005969 ORTHO05D007407 1.4e-154 550.1 356 75.8
GSVIVG01015969001 Vitis vinifera HOM05D005969 ORTHO05D007407 3.4e-153 545.4 329 79.9
Nn6g31679 Nelumbo nucifera HOM05D005969 ORTHO05D007407 4.5e-153 545.0 330 78.5
Aqoxy5G00978 Aquilegia oxysepala HOM05D005969 ORTHO05D007407 5.0e-152 541.6 393 70.0
CSS0032429 Camellia sinensis var. sinensis HOM05D005969 ORTHO05D007407 2.5e-151 539.3 387 69.8
Cfa001877 Carpinus fangiana HOM05D005969 ORTHO05D007407 9.4e-151 537.3 322 78.9
Lalb_Chr01g0012061 Lupinus albus HOM05D005969 ORTHO05D007407 9.4e-151 537.3 317 79.8
Haze_16671 Corylus avellana HOM05D005969 ORTHO05D007407 2.7e-150 535.8 350 74.0
Actinidia18250 Actinidia chinensis HOM05D005969 ORTHO05D007407 1.4e-149 533.5 390 67.9
FvH4_6g28580 Fragaria vesca HOM05D005969 ORTHO05D007407 1.4e-149 533.5 388 70.1
TWI12G1191 Tripterygium wilfordii HOM05D005969 ORTHO05D007407 1.4e-149 533.5 355 72.7
FAN02G2588 Fragaria x ananassa HOM05D005969 ORTHO05D007407 3.0e-149 532.3 346 74.9
CANSAT56G2142 Cannabis sativa HOM05D005969 ORTHO05D007407 5.2e-149 531.6 317 78.9
Lj3g0024544 Lotus japonicus HOM05D005969 ORTHO05D007407 5.2e-149 531.6 328 76.8
Duzib235G1247 Durio zibethinus HOM05D005969 ORTHO05D007407 6.7e-149 531.2 345 73.9
MD10G1047600 Malus domestica HOM05D005969 ORTHO05D007407 6.7e-149 531.2 389 69.9
RcHm_v2.0_Chr2g0132911 Rosa chinensis HOM05D005969 ORTHO05D007407 6.7e-149 531.2 345 75.1
Gohir.A05G118900 Gossypium hirsutum HOM05D005969 ORTHO05D007407 2.0e-148 529.6 340 74.1
Potri.001G044000 Populus trichocarpa HOM05D005969 ORTHO05D007407 2.0e-148 529.6 336 75.0
Psat7g262880 Pisum sativum HOM05D005969 ORTHO05D007407 4.4e-148 528.5 352 72.7
COL.COLO4_26714 Corchorus olitorius HOM05D005969 ORTHO05D007407 7.4e-148 527.7 341 74.2
Medtr4g007190 Medicago truncatula HOM05D005969 ORTHO05D007407 1.3e-147 526.9 358 72.1
Gorai.009G123400 Gossypium raimondii HOM05D005969 ORTHO05D007407 1.7e-147 526.6 340 73.8
Sabra01G0030300 Salix brachista HOM05D005969 ORTHO05D007407 2.8e-147 525.8 351 72.1
AUR62027000 Chenopodium quinoa HOM05D005969 ORTHO05D007407 3.7e-147 525.4 346 73.1
Dinv23280 Davidia involucrata HOM05D005969 ORTHO05D007407 4.8e-147 525.0 390 67.7
CiPaw.01G255000 Carya illinoinensis HOM05D005969 ORTHO05D007407 1.1e-146 523.9 349 73.1
MELO3C023469.2 Cucumis melo HOM05D005969 ORTHO05D007407 1.1e-146 523.9 351 72.4
Gohir.D05G119800 Gossypium hirsutum HOM05D005969 ORTHO05D007407 1.1e-146 523.9 340 73.5
PGR102G2845 Punica granatum HOM05D005969 ORTHO05D007407 1.8e-146 523.1 358 70.9
Nitab4.5_0000886g0040 Nicotiana tabacum HOM05D005969 ORTHO05D007407 3.1e-146 522.3 321 76.9
Glyma.08G219200 Glycine max HOM05D005969 ORTHO05D007407 7.0e-146 521.2 356 71.9
Phvul.010G161700 Phaseolus vulgaris HOM05D005969 ORTHO05D007407 7.0e-146 521.2 317 76.7
Nitab4.5_0008962g0040 Nicotiana tabacum HOM05D005969 ORTHO05D007407 1.6e-145 520.0 321 76.3
ATR0807G102 Amborella trichopoda HOM05D005969 ORTHO05D007407 2.0e-145 519.6 317 77.0
BraA07t31457Z Brassica rapa HOM05D005969 ORTHO05D007407 2.6e-145 519.2 325 75.4
CsaV3_7G031880 Cucumis sativus L. HOM05D005969 ORTHO05D007407 2.6e-145 519.2 351 72.1
arahy.Tifrunner.gnm1.ann1.M9PPGY Arachis hypogaea HOM05D005969 ORTHO05D007407 5.9e-145 518.1 332 74.7
arahy.Tifrunner.gnm1.ann1.WI8D6W Arachis hypogaea HOM05D005969 ORTHO05D007407 5.9e-145 518.1 349 72.2
Thhalv10018762m.g Eutrema salsugineum HOM05D005969 ORTHO05D007407 7.7e-145 517.7 354 70.6
AUR62030840 Chenopodium quinoa HOM05D005969 ORTHO05D007407 1.0e-144 517.3 353 71.4
ClCG09G003350 Citrullus lanatus HOM05D005969 ORTHO05D007407 1.7e-144 516.5 351 71.2
Hma1.2p1_0109F.1_g052610 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 2.2e-144 516.2 394 67.0
VMungo0331G0028 Vigna mungo HOM05D005969 ORTHO05D007407 2.9e-144 515.8 317 75.4
ECA247G4019 Erigeron canadensis HOM05D005969 ORTHO05D007407 3.8e-144 515.4 316 77.8
HanXRQChr04g0099681 Helianthus annuus HOM05D005969 ORTHO05D007407 3.8e-144 515.4 342 73.1
MBI05_g33301_MAGBIO Magnolia biondii HOM05D005969 ORTHO05D007407 3.8e-144 515.4 328 75.6
A07p39070 Brassica napus HOM05D005969 ORTHO05D007407 6.5e-144 514.6 322 75.2
C06p47280 Brassica napus HOM05D005969 ORTHO05D007407 6.5e-144 514.6 322 75.2
BolC6t39767H Brassica oleracea HOM05D005969 ORTHO05D007407 6.5e-144 514.6 322 75.2
THA.LOC104814755 Tarenaya hassleriana HOM05D005969 ORTHO05D007407 3.2e-143 512.3 326 73.3
Carub.0002s1982 Capsella rubella HOM05D005969 ORTHO05D007407 5.5e-143 511.5 359 69.4
Sed0009912 Sechium edule HOM05D005969 ORTHO05D007407 5.5e-143 511.5 326 73.6
Aa31LG4G3330 Aethionema arabicum HOM05D005969 ORTHO05D007407 7.2e-143 511.1 354 70.6
Sp5g28020 Schrenkiella parvula HOM05D005969 ORTHO05D007407 9.4e-143 510.8 340 72.1
Ciclev10025812m.g Citrus clementina HOM05D005969 ORTHO05D007407 1.6e-142 510.0 326 73.6
PGSC0003DMG402028489 Solanum tuberosum HOM05D005969 ORTHO05D007407 1.6e-142 510.0 341 72.1
Atru.chr10.2417 Acer truncatum HOM05D005969 ORTHO05D007407 2.1e-142 509.6 360 71.1
Lsat_1_v5_gn_1_31041 Lactuca sativa HOM05D005969 ORTHO05D007407 2.1e-142 509.6 386 66.1
MSTRG.22801 Avicennia marina HOM05D005969 ORTHO05D007407 4.7e-142 508.4 320 74.4
Eucgr.F03965 Eucalyptus grandis HOM05D005969 ORTHO05D007407 6.1e-142 508.1 325 73.8
CAN.G1932.3 Capsicum annuum HOM05D005969 ORTHO05D007407 1.0e-141 507.3 344 70.6
Solyc06g068480.3 Solanum lycopersicum HOM05D005969 ORTHO05D007407 1.0e-141 507.3 341 72.1
Sopen06g025730 Solanum pennellii HOM05D005969 ORTHO05D007407 1.0e-141 507.3 341 72.1
AT1G73060 Arabidopsis thaliana HOM05D005969 ORTHO05D007407 1.4e-141 506.9 348 70.7
SGA_v2.0_scaffold37G14696 Striga asiatica HOM05D005969 ORTHO05D007407 1.4e-141 506.9 317 76.3
EL10Ac9g22204 Beta vulgaris HOM05D005969 ORTHO05D007407 3.0e-141 505.8 332 72.3
CDE06G0123 Ceratophyllum demersum HOM05D005969 ORTHO05D007407 5.2e-141 505.0 317 76.0
Sc12g0005780 Simmondsia chinensis HOM05D005969 ORTHO05D007407 1.5e-140 503.4 358 69.3
Cc04_g05150 Coffea canephora HOM05D005969 ORTHO05D007407 2.0e-140 503.1 330 72.1
AL2G32810 Arabidopsis lyrata HOM05D005969 ORTHO05D007407 5.7e-140 501.5 348 70.1
Cpa.g.sc1250.2 Carica papaya HOM05D005969 ORTHO05D007407 7.5e-140 501.1 332 73.5
Migut.I00689 Erythranthe guttata HOM05D005969 ORTHO05D007407 1.3e-139 500.4 358 68.4
Os02g0117100 Oryza sativa ssp. japonica HOM05D005969 ORTHO05D007407 1.1e-138 497.3 316 74.7
DCAR_021370 Daucus carota HOM05D005969 ORTHO05D007407 1.6e-137 493.4 327 72.5
Thecc.06G042200 Theobroma cacao HOM05D005969 ORTHO05D007407 1.3e-136 490.3 376 65.7
Rhsim08G0203900 Rhododendron simsii HOM05D005969 ORTHO05D007407 6.5e-136 488.0 392 65.6
Hund06517 Selenicereus undatus HOM05D005969 ORTHO05D007407 1.1e-135 487.3 389 63.8
HPP92_025491 Vanilla planifolia HOM05D005969 ORTHO05D007407 4.2e-135 485.3 354 65.8
SalBow7G3052 Salvia bowleyana HOM05D005969 ORTHO05D007407 3.6e-134 482.3 374 62.8
QL05p035856 Quercus lobata HOM05D005969 ORTHO05D007407 1.3e-128 463.8 276 77.9
FAN05G1215 Fragaria x ananassa HOM05D005969 ORTHO05D007407 6.8e-125 451.4 299 73.6
Peaxi162Scf00207g00440 Petunia axillaris HOM05D005969 ORTHO05D007407 8.9e-125 451.1 329 66.9
Lj9C492T12 Lonicera japonica HOM05D005969 ORTHO05D007407 1.5e-124 450.3 268 79.1
unitig_27.g25102 Utricularia gibba HOM05D005969 ORTHO05D002795 6.3e-123 444.9 278 75.2
Mapoly0001s0169 Marchantia polymorpha HOM05D005969 ORTHO05D007407 2.8e-118 429.5 314 63.4
HanXRQChr14g0426701 Helianthus annuus HOM05D005969 ORTHO05D007407 3.6e-118 429.1 267 76.4
Ah.01g024670 Amaranthus hybridus HOM05D005969 ORTHO05D007407 5.2e-117 425.2 330 65.5
vmacro19064 Vaccinium macrocarpon HOM05D005969 ORTHO05D007407 6.8e-117 424.9 261 77.4
Pp3c4_10300 Physcomitrium patens HOM05D005969 ORTHO05D007407 1.2e-116 424.1 320 64.1
AagrBONN_evm.TU.Sc2ySwM_362.432 Anthoceros agrestis HOM05D005969 ORTHO05D007407 4.6e-113 412.1 329 59.6
HPP92_025442 Vanilla planifolia HOM05D005969 ORTHO05D007407 1.1e-111 407.5 268 70.1
SMO358G0640 Selaginella moellendorffii HOM05D005969 ORTHO05D007407 2.3e-109 399.8 317 58.4
Manes.11G065200 Manihot esculenta HOM05D005969 ORTHO05D007407 1.3e-104 384.0 264 70.1
Prupe.3G098800 Prunus persica HOM05D005969 ORTHO05D007407 2.0e-100 370.2 296 64.2
arahy.Tifrunner.gnm1.ann1.5US335 Arachis hypogaea HOM05D005969 ORTHO05D007407 2.2e-99 366.7 272 65.4
arahy.Tifrunner.gnm1.ann1.9VR9ZH Arachis hypogaea HOM05D005969 ORTHO05D007407 6.0e-97 358.6 267 64.4
HanXRQChr04g0099721 Helianthus annuus HOM05D005969 ORTHO05D007407 7.3e-95 351.7 290 62.1
FAN14G2562 Fragaria x ananassa HOM05D005969 ORTHO05D007407 8.1e-94 348.2 293 63.1
CARHR066030 Cardamine hirsuta HOM05D005969 ORTHO05D007407 2.6e-84 316.6 260 61.2
arahy.Tifrunner.gnm1.ann1.79PBZ8 Arachis hypogaea HOM05D005969 ORTHO05D007407 3.6e-78 296.2 267 60.7
Cre03.g184550 Chlamydomonas reinhardtii HOM05D005969 ORTHO05D007407 7.1e-74 282.0 312 47.8
MCO01G214 Micromonas commoda HOM05D005969 ORTHO05D007407 3.0e-72 276.6 329 41.9
MCO01G215 Micromonas commoda HOM05D005969 ORTHO05D007407 3.0e-72 276.6 329 41.9
arahy.Tifrunner.gnm1.ann1.UJC0YQ Arachis hypogaea HOM05D005969 ORTHO05D007407 1.9e-71 273.9 273 53.1
PRCOL_00001281 Prasinoderma coloniale HOM05D005969 ORTHO05D007407 3.2e-66 256.5 328 43.0
Sc12g0008350 Simmondsia chinensis HOM05D005969 ORTHO05D007407 3.2e-66 256.5 150 80.7
Zm00001eb230040 Zea mays HOM05D005969 ORTHO05D007407 5.5e-66 255.8 198 65.7
Ca_20531_v3 Cicer arietinum L. HOM05D005969 ORTHO05D007407 2.7e-65 253.4 200 64.0
Hma1.2p1_0109F.1_g052630 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 3.1e-61 240.0 166 72.3
Ca_20538_v3 Cicer arietinum L. HOM05D005969 ORTHO05D007407 7.6e-60 235.3 130 85.4
MCO09G747 Micromonas commoda HOM05D005969 ORTHO05D007407 2.2e-35 154.1 393 31.8
CBR_g50572 Chara braunii HOM05D000019 ORTHO05D000048 3.2e-34 150.2 100 71.0
SEGI_39006 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 2.2e-30 137.5 75 82.7
arahy.Tifrunner.gnm1.ann1.U87P2U Arachis hypogaea HOM05D005442 ORTHO05D006450 6.3e-30 136.0 91 65.9
HanXRQChr04g0099751 Helianthus annuus HOM05D005969 ORTHO05D007407 6.3e-30 136.0 79 81.0
Sc12g0008300 Simmondsia chinensis HOM05D005969 ORTHO05D007407 7.2e-26 122.5 90 62.2
CBR_g50568 Chara braunii HOM05D000004 ORTHO05D000002 8.2e-22 109.0 85 58.8
arahy.Tifrunner.gnm1.ann1.4WI1XR Arachis hypogaea HOM05D005969 ORTHO05D007407 1.8e-16 91.3 105 44.8
QL04p063552 Quercus lobata HOM05D005969 ORTHO05D007407 1.8e-16 91.3 77 62.3
SEGI_03763 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 1.1e-13 82.0 68 57.4
SEGI_15560 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 1.1e-13 82.0 68 57.4
Glyma.07G022602 Glycine max HOM05D005969 ORTHO05D007407 4.1e-13 80.1 59 69.5
HanXRQChr14g0426781 Helianthus annuus HOM05D005969 ORTHO05D007407 5.4e-13 79.7 47 78.7
Hma1.2p1_0109F.1_g052620 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 5.4e-13 79.7 54 66.7
BcaB04g17655 Brassica carinata HOM05D005969 ORTHO05D007407 1.2e-12 78.6 58 58.6
Pp3c12_7180 Physcomitrium patens HOM05D001237 ORTHO05D009110 3.5e-12 77.0 297 27.9
PGSC0003DMG400019818 Solanum tuberosum HOM05D005969 ORTHO05D007407 3.5e-12 77.0 95 48.4
Psat2g141080 Pisum sativum HOM05D001237 ORTHO05D009110 1.0e-11 75.5 318 25.5
Nn3g19221 Nelumbo nucifera HOM05D001237 ORTHO05D009110 1.9e-10 71.2 324 26.9
Potri.003G182801 Populus trichocarpa HOM05D005969 ORTHO05D007407 2.5e-10 70.9 75 50.7
Lj9C492T13 Lonicera japonica HOM05D005969 ORTHO05D007407 4.2e-10 70.1 82 50.0
Sopen08g024630 Solanum pennellii HOM05D001237 ORTHO05D009110 4.2e-10 70.1 318 26.4
TPR.G26782 Trifolium pratense HOM05D009488 ORTHO05D011222 4.2e-10 70.1 74 54.1
vmacro22924 Vaccinium macrocarpon HOM05D001237 ORTHO05D009110 4.2e-10 70.1 312 25.6
MD00G1000600 Malus domestica HOM05D001237 ORTHO05D009110 5.5e-10 69.7 310 27.4
QL05p035860 Quercus lobata HOM05D005969 ORTHO05D007407 2.1e-09 67.8 49 69.4
AL8G21880 Arabidopsis lyrata HOM05D001237 ORTHO05D009110 2.8e-09 67.4 280 26.8
Sp2g19180 Schrenkiella parvula HOM05D001237 ORTHO05D009110 2.8e-09 67.4 303 27.1
TPR.G23080 Trifolium pratense HOM05D005969 ORTHO05D007407 2.8e-09 67.4 79 50.6
TPR.G29137 Trifolium pratense HOM05D001237 ORTHO05D009110 2.8e-09 67.4 312 25.0
Cc00_g24190 Coffea canephora HOM05D001237 ORTHO05D009110 3.6e-09 67.0 302 24.2
Thecc.03G315000 Theobroma cacao HOM05D001237 ORTHO05D009110 3.6e-09 67.0 296 26.0
Sed0014021 Sechium edule HOM05D001237 ORTHO05D009110 4.7e-09 66.6 308 25.3
Duzib084G0831 Durio zibethinus HOM05D001237 ORTHO05D009110 6.1e-09 66.2 280 25.0
AT5G48790 Arabidopsis thaliana HOM05D001237 ORTHO05D009110 1.0e-08 65.5 305 26.2
Aqoxy3G02614 Aquilegia oxysepala HOM05D001237 ORTHO05D009110 1.4e-08 65.1 287 25.4
Mapoly0052s0004 Marchantia polymorpha HOM05D001237 ORTHO05D009110 1.4e-08 65.1 303 26.4
ATR0829G072 Amborella trichopoda HOM05D001237 ORTHO05D009110 2.3e-08 64.3 296 24.7
arahy.Tifrunner.gnm1.ann1.GZLR9S Arachis hypogaea HOM05D005969 ORTHO05D007407 3.0e-08 63.9 33 84.8
Lj2g0015654 Lotus japonicus HOM05D001237 ORTHO05D009110 5.2e-08 63.2 312 23.4
Potri.003G100300 Populus trichocarpa HOM05D001237 ORTHO05D009110 5.2e-08 63.2 328 26.2
Carub.0008s0852 Capsella rubella HOM05D001237 ORTHO05D009110 8.9e-08 62.4 281 25.3
SMO356G0709 Selaginella moellendorffii HOM05D001237 ORTHO05D009110 1.5e-07 61.6 310 26.1
Atru.chr6.1547 Acer truncatum HOM05D001237 ORTHO05D009110 3.4e-07 60.5 295 24.1
FAN18G3541 Fragaria x ananassa HOM05D001237 ORTHO05D009110 3.4e-07 60.5 315 24.8
FAN18G4185 Fragaria x ananassa HOM05D001237 ORTHO05D009110 3.4e-07 60.5 315 24.8
Gorai.004G179700 Gossypium raimondii HOM05D001237 ORTHO05D009110 3.4e-07 60.5 280 24.6
FvH4_5g23760 Fragaria vesca HOM05D001237 ORTHO05D009110 4.4e-07 60.1 315 24.8
FAN08G1241 Fragaria x ananassa HOM05D001237 ORTHO05D009110 5.7e-07 59.7 317 25.2
CsaV3_3G001140 Cucumis sativus L. HOM05D001237 ORTHO05D009110 7.5e-07 59.3 302 24.5
Gohir.A08G151200 Gossypium hirsutum HOM05D001237 ORTHO05D009110 7.5e-07 59.3 280 24.3
Psat6g223920 Pisum sativum HOM05D002710 ORTHO05D002905 7.5e-07 59.3 49 59.2
Cpa.g.sc24.66 Carica papaya HOM05D001237 ORTHO05D009110 9.8e-07 58.9 280 25.0
HanXRQChr04g0099771 Helianthus annuus HOM05D005969 ORTHO05D007407 9.8e-07 58.9 42 69.0
MCO15G307 Micromonas commoda HOM05D001237 ORTHO05D009110 9.8e-07 58.9 305 23.6
Phvul.002G132200 Phaseolus vulgaris HOM05D001237 ORTHO05D009110 9.8e-07 58.9 306 24.2
Lj8A324T105 Lonicera japonica HOM05D001237 ORTHO05D009110 1.3e-06 58.5 319 25.7
MCO12G167 Micromonas commoda HOM05D001237 ORTHO05D009110 1.3e-06 58.5 291 25.4
Manes.17G008800 Manihot esculenta HOM05D001237 ORTHO05D009110 1.7e-06 58.2 286 26.6
Eucgr.E01249 Eucalyptus grandis HOM05D001237 ORTHO05D009110 2.8e-06 57.4 271 25.8
Rhsim07G0137000 Rhododendron simsii HOM05D001237 ORTHO05D009110 2.8e-06 57.4 280 26.4
THA.LOC104812764 Tarenaya hassleriana HOM05D001237 ORTHO05D009110 2.8e-06 57.4 282 26.6


User provided reference genes

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