Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G1502 Papaver somniferum HOM05D000198 ORTHO05D005702 3.4e-55 218.0 104 100.0
PSO384G4748 Papaver somniferum HOM05D000198 ORTHO05D005702 1.6e-41 172.6 133 68.4
Dinv42461 Davidia involucrata HOM05D000198 ORTHO05D005702 2.1e-36 155.6 128 61.7
Prupe.4G128100 Prunus persica HOM05D000198 ORTHO05D005702 2.1e-36 155.6 131 61.8
Actinidia12753 Actinidia chinensis HOM05D000198 ORTHO05D005702 3.5e-36 154.8 131 58.8
Hma1.2p1_1896F.1_g306840 Hydrangea macrophylla HOM05D000198 ORTHO05D005702 3.5e-36 154.8 128 60.9
Haze_07763 Corylus avellana HOM05D000198 ORTHO05D005702 6.0e-36 154.1 131 58.8
Hma1.2p1_0334F.1_g128390 Hydrangea macrophylla HOM05D000198 ORTHO05D005702 1.0e-35 153.3 128 60.2
Nn8g40255 Nelumbo nucifera HOM05D000198 ORTHO05D005702 1.0e-35 153.3 128 60.2
Cc05_g16560 Coffea canephora HOM05D000198 ORTHO05D005702 1.3e-35 152.9 128 59.4
Atru.chr1.55 Acer truncatum HOM05D000198 ORTHO05D005702 1.8e-35 152.5 131 58.0
Sed0009726 Sechium edule HOM05D000198 ORTHO05D005702 2.3e-35 152.1 131 57.3
Cpa.g.sc32.93 Carica papaya HOM05D000198 ORTHO05D005702 3.0e-35 151.8 128 59.4
AUR62039633 Chenopodium quinoa HOM05D000198 ORTHO05D005702 3.0e-35 151.8 130 56.9
Lsat_1_v5_gn_7_110980 Lactuca sativa HOM05D000198 ORTHO05D005702 3.0e-35 151.8 129 58.1
CSS0002476 Camellia sinensis var. sinensis HOM05D000198 ORTHO05D005702 3.9e-35 151.4 131 58.0
Aqoxy1G01365 Aquilegia oxysepala HOM05D000198 ORTHO05D005702 5.1e-35 151.0 128 59.4
TAR626G1240 Trochodendron aralioides HOM05D000198 ORTHO05D005702 5.1e-35 151.0 127 60.6
HanXRQChr07g0190721 Helianthus annuus HOM05D000198 ORTHO05D005702 6.7e-35 150.6 129 58.9
HanXRQChr13g0419821 Helianthus annuus HOM05D000198 ORTHO05D005702 6.7e-35 150.6 129 58.9
Peaxi162Scf00153g00189 Petunia axillaris HOM05D000198 ORTHO05D005702 6.7e-35 150.6 128 57.8
MD05G1238300 Malus domestica HOM05D000198 ORTHO05D005702 1.1e-34 149.8 131 58.8
MD10G1216600 Malus domestica HOM05D000198 ORTHO05D005702 1.1e-34 149.8 131 58.0
ECA236G0201 Erigeron canadensis HOM05D000198 ORTHO05D005702 1.5e-34 149.4 128 57.8
PGR031G3164 Punica granatum HOM05D000198 ORTHO05D005702 1.5e-34 149.4 131 57.3
RcHm_v2.0_Chr5g0023391 Rosa chinensis HOM05D000198 ORTHO05D005702 1.5e-34 149.4 128 59.4
SGA_v2.0_scaffold7G03629 Striga asiatica HOM05D000198 ORTHO05D005702 1.5e-34 149.4 128 57.8
GSVIVG01036719001 Vitis vinifera HOM05D000198 ORTHO05D005702 1.5e-34 149.4 131 55.7
Migut.M01503 Erythranthe guttata HOM05D000198 ORTHO05D005702 1.9e-34 149.1 128 57.0
THA.LOC104808138 Tarenaya hassleriana HOM05D000198 ORTHO05D005702 1.9e-34 149.1 128 57.8
Rhsim06G0244300 Rhododendron simsii HOM05D000198 ORTHO05D005702 2.5e-34 148.7 137 56.2
DCAR_032012 Daucus carota HOM05D000198 ORTHO05D005702 3.3e-34 148.3 128 57.8
Lalb_Chr20g0108421 Lupinus albus HOM05D000198 ORTHO05D005702 3.3e-34 148.3 131 56.5
Manes.16G048100 Manihot esculenta HOM05D000198 ORTHO05D005702 3.3e-34 148.3 128 56.2
Psat1g015240 Pisum sativum HOM05D000198 ORTHO05D005702 4.3e-34 147.9 128 57.8
CiPaw.11G057000 Carya illinoinensis HOM05D000198 ORTHO05D005702 5.6e-34 147.5 131 55.7
Eucgr.F04474 Eucalyptus grandis HOM05D000198 ORTHO05D005702 5.6e-34 147.5 128 57.8
Zm00001eb207050 Zea mays HOM05D000198 ORTHO05D005702 5.6e-34 147.5 129 56.6
Zm00001eb233300 Zea mays HOM05D000198 ORTHO05D005702 5.6e-34 147.5 129 56.6
CANSAT56G2629 Cannabis sativa HOM05D000198 ORTHO05D005702 7.4e-34 147.1 128 57.0
CANSAT56G4341 Cannabis sativa HOM05D000198 ORTHO05D005702 7.4e-34 147.1 128 57.0
CAN.G524.27 Capsicum annuum HOM05D000198 ORTHO05D005702 7.4e-34 147.1 128 57.8
Ciclev10004713m.g Citrus clementina HOM05D000198 ORTHO05D005702 7.4e-34 147.1 128 57.8
FvH4_3g14080 Fragaria vesca HOM05D000198 ORTHO05D005702 7.4e-34 147.1 128 57.8
Duzib268G0428 Durio zibethinus HOM05D000198 ORTHO05D005702 9.6e-34 146.7 128 57.8
FAN21G2180 Fragaria x ananassa HOM05D000198 ORTHO05D005702 9.6e-34 146.7 128 57.8
HanXRQChr07g0190661 Helianthus annuus HOM05D000198 ORTHO05D005702 9.6e-34 146.7 128 59.4
Peaxi162Scf00117g00003 Petunia axillaris HOM05D000198 ORTHO05D005702 9.6e-34 146.7 128 57.8
Ca_03179_v3 Cicer arietinum L. HOM05D000198 ORTHO05D005702 1.3e-33 146.4 128 57.8
FAN16G0643 Fragaria x ananassa HOM05D000198 ORTHO05D005702 1.3e-33 146.4 128 57.8
FAN25G1729 Fragaria x ananassa HOM05D000198 ORTHO05D005702 1.3e-33 146.4 128 57.8
Gohir.D01G084900 Gossypium hirsutum HOM05D000198 ORTHO05D005702 1.3e-33 146.4 128 59.4
TPR.G28436 Trifolium pratense HOM05D000198 ORTHO05D005702 1.3e-33 146.4 128 57.0
Nitab4.5_0000194g0150 Nicotiana tabacum HOM05D000198 ORTHO05D005702 1.6e-33 146.0 128 56.2
Nitab4.5_0013063g0020 Nicotiana tabacum HOM05D000198 ORTHO05D005702 1.6e-33 146.0 128 56.2
TWI38G0157 Tripterygium wilfordii HOM05D000198 ORTHO05D005702 1.6e-33 146.0 128 57.0
Solyc09g090700.1 Solanum lycopersicum HOM05D000198 ORTHO05D005702 2.1e-33 145.6 128 56.2
Sopen09g033640 Solanum pennellii HOM05D000198 ORTHO05D005702 2.1e-33 145.6 128 56.2
PGSC0003DMG400017144 Solanum tuberosum HOM05D000198 ORTHO05D005702 2.1e-33 145.6 128 56.2
TWI38G1970 Tripterygium wilfordii HOM05D000198 ORTHO05D005702 2.1e-33 145.6 128 56.2
MSTRG.7092 Avicennia marina HOM05D000198 ORTHO05D005702 2.8e-33 145.2 128 55.5
Gohir.A01G100200 Gossypium hirsutum HOM05D000198 ORTHO05D005702 2.8e-33 145.2 128 58.6
Potri.010G174000 Populus trichocarpa HOM05D000198 ORTHO05D005702 2.8e-33 145.2 128 57.8
arahy.Tifrunner.gnm1.ann1.15VWWC Arachis hypogaea HOM05D000198 ORTHO05D005702 3.7e-33 144.8 128 56.2
Thecc.07G192200 Theobroma cacao HOM05D000198 ORTHO05D005702 3.7e-33 144.8 128 57.8
MELO3C019622.2 Cucumis melo HOM05D000198 ORTHO05D005702 4.8e-33 144.4 128 56.2
CsaV3_6G013440 Cucumis sativus L. HOM05D000198 ORTHO05D005702 4.8e-33 144.4 128 56.2
Lalb_Chr25g0284351 Lupinus albus HOM05D000198 ORTHO05D005702 4.8e-33 144.4 128 56.2
Duzib213G0040 Durio zibethinus HOM05D000198 ORTHO05D005702 6.2e-33 144.1 128 56.2
Thhalv10018394m.g Eutrema salsugineum HOM05D000198 ORTHO05D005702 1.1e-32 143.3 128 57.8
Glyma.15G263500 Glycine max HOM05D000198 ORTHO05D005702 1.1e-32 143.3 128 55.5
Medtr2g067660 Medicago truncatula HOM05D000198 ORTHO05D005702 1.1e-32 143.3 128 57.0
Phvul.005G048150 Phaseolus vulgaris HOM05D000198 ORTHO05D005702 1.1e-32 143.3 127 56.7
Sp5g34490 Schrenkiella parvula HOM05D000198 ORTHO05D005702 1.1e-32 143.3 128 56.2
AL2G40050 Arabidopsis lyrata HOM05D000198 ORTHO05D005702 1.4e-32 142.9 128 57.0
Glyma.08G163700 Glycine max HOM05D000198 ORTHO05D005702 1.4e-32 142.9 128 55.5
BcaC08g47505 Brassica carinata HOM05D000198 ORTHO05D005702 1.8e-32 142.5 128 57.0
A07p44510 Brassica napus HOM05D000198 ORTHO05D005702 1.8e-32 142.5 128 57.0
C06p53340 Brassica napus HOM05D000198 ORTHO05D005702 1.8e-32 142.5 128 57.0
BolC6t40351H Brassica oleracea HOM05D000198 ORTHO05D005702 1.8e-32 142.5 128 57.0
BraA07t31961Z Brassica rapa HOM05D000198 ORTHO05D005702 1.8e-32 142.5 128 57.0
Carub.0002s2630 Capsella rubella HOM05D000198 ORTHO05D005702 1.8e-32 142.5 128 57.0
unitig_26.g10057 Utricularia gibba HOM05D000198 ORTHO05D005702 1.8e-32 142.5 127 55.9
DCAR_004554 Daucus carota HOM05D000198 ORTHO05D005702 3.1e-32 141.7 128 53.9
HanXRQChr11g0335851 Helianthus annuus HOM05D000198 ORTHO05D005702 3.1e-32 141.7 129 55.8
HanXRQChr11g0335861 Helianthus annuus HOM05D000198 ORTHO05D005702 3.1e-32 141.7 129 55.8
AT1G79440 Arabidopsis thaliana HOM05D000198 ORTHO05D005702 4.0e-32 141.4 128 56.2
Lj3g0005942 Lotus japonicus HOM05D000198 ORTHO05D005702 2.6e-31 138.7 128 55.5
Pp3c26_10950 Physcomitrium patens HOM05D000198 ORTHO05D005702 4.5e-31 137.9 128 53.9
Pp3c26_10958 Physcomitrium patens HOM05D000198 ORTHO05D005702 4.5e-31 137.9 128 53.9
FAN11G1157 Fragaria x ananassa HOM05D000198 ORTHO05D005702 1.0e-30 136.7 134 53.7
ATR0697G108 Amborella trichopoda HOM05D000198 ORTHO05D005702 3.8e-30 134.8 128 51.6
Cfa019371 Carpinus fangiana HOM05D000198 ORTHO05D005702 3.8e-30 134.8 125 55.2
HanXRQChr11g0335841 Helianthus annuus HOM05D000198 ORTHO05D005702 3.8e-30 134.8 129 52.7
AagrBONN_evm.TU.Sc2ySwM_228.3765 Anthoceros agrestis HOM05D000198 ORTHO05D005702 4.9e-30 134.4 127 52.8
SalBow8G1239 Salvia bowleyana HOM05D000198 ORTHO05D005702 6.5e-30 134.0 123 56.1
SalBow8G3664 Salvia bowleyana HOM05D000198 ORTHO05D005702 6.5e-30 134.0 123 56.1
QL04p094021 Quercus lobata HOM05D000198 ORTHO05D005702 1.1e-29 133.3 119 57.1
Lj2A9G44 Lonicera japonica HOM05D000198 ORTHO05D005702 1.9e-29 132.5 119 56.3
SMO364G0446 Selaginella moellendorffii HOM05D000198 ORTHO05D005702 1.9e-29 132.5 127 52.8
AUR62024987 Chenopodium quinoa HOM05D000198 ORTHO05D005702 4.2e-29 131.3 119 54.6
ClCG02G018730 Citrullus lanatus HOM05D000198 ORTHO05D005702 4.2e-29 131.3 128 51.6
Gorai.002G110500 Gossypium raimondii HOM05D000198 ORTHO05D005702 5.5e-29 131.0 120 58.3
SHI33378 Sapria himalayana HOM05D000198 ORTHO05D005702 1.2e-28 129.8 120 56.7
Sc06g0002010 Simmondsia chinensis HOM05D000198 ORTHO05D005702 2.1e-28 129.0 120 55.8
GSVIVG01036720001 Vitis vinifera HOM05D000198 ORTHO05D005702 2.7e-28 128.6 128 50.8
Mapoly0091s0004 Marchantia polymorpha HOM05D000198 ORTHO05D005702 3.5e-28 128.3 127 50.4
SGA_v2.0_scaffold7G03666 Striga asiatica HOM05D000198 ORTHO05D005702 3.5e-28 128.3 134 53.0
arahy.Tifrunner.gnm1.ann1.D1NSDN Arachis hypogaea HOM05D000198 ORTHO05D005702 7.9e-28 127.1 123 52.0
vmacro22500 Vaccinium macrocarpon HOM05D000198 ORTHO05D005702 7.9e-28 127.1 76 76.3
EL10Ac2g03290 Beta vulgaris HOM05D000198 ORTHO05D005702 3.0e-27 125.2 120 51.7
Ah.02g111790 Amaranthus hybridus HOM05D000198 ORTHO05D005702 5.1e-27 124.4 119 52.1
GSVIVG01036721001 Vitis vinifera HOM05D000198 ORTHO05D005702 1.1e-26 123.2 128 46.9
Pp3c6_27580 Physcomitrium patens HOM05D000198 ORTHO05D005702 2.5e-26 122.1 128 46.9
Hund12032 Selenicereus undatus HOM05D000198 ORTHO05D005702 4.3e-26 121.3 120 51.7
Aa31LG4G1580 Aethionema arabicum HOM05D000198 ORTHO05D005702 9.6e-26 120.2 128 49.2
Sabra10G0133900 Salix brachista HOM05D000198 ORTHO05D005702 1.8e-24 115.9 170 40.6
MCO16G663 Micromonas commoda HOM05D000198 ORTHO05D005702 5.1e-19 97.8 121 43.0
CBR_g12684 Chara braunii HOM05D000198 ORTHO05D005702 6.7e-19 97.4 125 44.0
HanXRQChr12g0382601 Helianthus annuus HOM05D000198 ORTHO05D005702 1.5e-18 96.3 60 73.3
CBR_g12537 Chara braunii HOM05D000198 ORTHO05D005702 1.9e-18 95.9 127 41.7
Cre08.g381702 Chlamydomonas reinhardtii HOM05D000198 ORTHO05D005702 1.1e-16 90.1 57 66.7
CDE06G0595 Ceratophyllum demersum HOM05D000198 ORTHO05D005702 5.3e-16 87.8 101 46.5
PRCOL_00006022 Prasinoderma coloniale HOM05D000198 ORTHO05D005702 7.7e-15 84.0 60 61.7
Cfa027216 Carpinus fangiana HOM05D000198 ORTHO05D005702 1.3e-14 83.2 128 36.7
Pp3s58_320 Physcomitrium patens HOM05D000198 ORTHO05D014179 4.6e-12 74.7 62 56.5
Haze_27055 Corylus avellana HOM05D000198 ORTHO05D005702 6.1e-12 74.3 125 35.2
SEGI_36932 Sequoiadendron giganteum HOM05D000198 ORTHO05D000763 5.9e-07 57.8 120 34.2
Ca_29316_v3 Cicer arietinum L. HOM05D000198 ORTHO05D003365 5.0e-06 54.7 57 49.1
Carub.0002s2171 Capsella rubella HOM05D000198 ORTHO05D003365 6.5e-06 54.3 125 32.8
SEGI_24964 Sequoiadendron giganteum HOM05D000198 ORTHO05D000763 6.5e-06 54.3 120 32.5
unitig_749.g13691 Utricularia gibba HOM05D000198 ORTHO05D005702 6.5e-06 54.3 35 68.6
AL2G34800 Arabidopsis lyrata HOM05D000198 ORTHO05D003365 8.5e-06 53.9 59 47.5
A02p22830 Brassica napus HOM05D000198 ORTHO05D042445 8.5e-06 53.9 94 35.1


User provided reference genes

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