Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO548G0038 Papaver somniferum HOM05D000806 ORTHO05D007429 2.0e-103 379.0 185 100.0
Nn010s41435 Nelumbo nucifera HOM05D000806 ORTHO05D007429 1.1e-99 366.7 185 95.7
Nn265s45955 Nelumbo nucifera HOM05D000806 ORTHO05D007429 1.1e-99 366.7 185 95.7
Hma1.2p1_0035F.1_g021940 Hydrangea macrophylla HOM05D000806 ORTHO05D007429 1.0e-94 350.1 185 90.3
Gohir.A07G163672 Gossypium hirsutum HOM05D000806 ORTHO05D007429 1.7e-94 349.4 185 90.3
Sed0015006 Sechium edule HOM05D000806 ORTHO05D007429 1.9e-93 345.9 185 89.7
Duzib198G0003 Durio zibethinus HOM05D000806 ORTHO05D002324 3.3e-93 345.1 182 90.1
CAN.G3.24 Capsicum annuum HOM05D000806 ORTHO05D007429 5.6e-93 344.4 185 88.6
MELO3C027107.2 Cucumis melo HOM05D000806 ORTHO05D007429 2.8e-92 342.0 185 89.2
Potri.013G162400 Populus trichocarpa HOM05D000806 ORTHO05D007429 3.6e-92 341.7 185 88.6
RcHm_v2.0_CPg0502091 Rosa chinensis HOM05D000806 ORTHO05D007429 3.6e-92 341.7 185 90.8
DCAR_032495 Daucus carota HOM05D000806 ORTHO05D007429 1.1e-91 340.1 185 87.6
Gohir.A07G163690 Gossypium hirsutum HOM05D000806 ORTHO05D007429 1.1e-91 340.1 185 89.2
RcHm_v2.0_Chr5g0042981 Rosa chinensis HOM05D000806 ORTHO05D007429 1.4e-91 339.7 185 90.3
PGR111G0079 Punica granatum HOM05D000806 ORTHO05D007429 2.3e-91 339.0 185 88.1
HanXRQChr01g0020361 Helianthus annuus HOM05D000806 ORTHO05D007429 6.8e-91 337.4 185 87.0
HanXRQChr10g0283551 Helianthus annuus HOM05D000806 ORTHO05D007429 6.8e-91 337.4 185 87.0
HanXRQChr10g0289261 Helianthus annuus HOM05D000806 ORTHO05D007429 6.8e-91 337.4 185 87.0
HanXRQChr10g0318201 Helianthus annuus HOM05D000806 ORTHO05D007429 6.8e-91 337.4 185 87.0
HanXRQChr11g0326821 Helianthus annuus HOM05D000806 ORTHO05D007429 6.8e-91 337.4 185 87.0
HanXRQCPg0580031 Helianthus annuus HOM05D000806 ORTHO05D007429 6.8e-91 337.4 185 87.0
Eucgr.E02608 Eucalyptus grandis HOM05D000806 ORTHO05D007429 1.2e-90 336.7 185 88.1
Lj2P1237T60 Lonicera japonica HOM05D000806 ORTHO05D007429 4.4e-90 334.7 185 87.6
ATCG00520 Arabidopsis thaliana HOM05D000806 ORTHO05D007429 8.4e-89 330.5 185 87.0
CARHR282100 Cardamine hirsuta HOM05D000806 ORTHO05D007429 2.4e-88 328.9 185 86.5
BraSC103t45466Z Brassica rapa HOM05D000806 ORTHO05D007429 5.4e-88 327.8 185 87.0
AL2G20666 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 1.6e-87 326.2 182 86.8
A06p23190 Brassica napus HOM05D000806 ORTHO05D007429 2.1e-87 325.9 185 86.5
C09p29600 Brassica napus HOM05D000806 ORTHO05D007429 2.1e-87 325.9 185 86.5
C09p40230 Brassica napus HOM05D000806 ORTHO05D007429 2.1e-87 325.9 185 86.5
BraSC25t45866Z Brassica rapa HOM05D000806 ORTHO05D007429 2.1e-87 325.9 185 86.5
BraSC59t46591Z Brassica rapa HOM05D000806 ORTHO05D007429 2.1e-87 325.9 185 86.5
BolC9t56915H Brassica oleracea HOM05D000806 ORTHO05D007429 1.3e-86 323.2 185 85.4
BolSC35t60646H Brassica oleracea HOM05D000806 ORTHO05D007429 1.3e-86 323.2 185 85.9
BolSC35t60750H Brassica oleracea HOM05D000806 ORTHO05D007429 1.3e-86 323.2 185 85.9
BolSC49t61183H Brassica oleracea HOM05D000806 ORTHO05D007429 1.3e-86 323.2 185 85.9
Migut.H01166 Erythranthe guttata HOM05D000806 ORTHO05D007429 2.5e-85 318.9 171 88.9
Migut.H01167 Erythranthe guttata HOM05D000806 ORTHO05D007429 2.5e-85 318.9 171 88.9
EL10Ac4g09266 Beta vulgaris HOM05D000806 ORTHO05D007429 7.3e-85 317.4 185 84.3
Peaxi162Scf00021g00088 Petunia axillaris HOM05D000806 ORTHO05D007429 8.9e-83 310.5 185 82.7
BolSC29t60467H Brassica oleracea HOM05D000806 ORTHO05D007429 3.4e-82 308.5 184 82.1
Hund28839 Selenicereus undatus HOM05D000806 ORTHO05D007429 6.4e-81 304.3 182 82.4
Hund29829 Selenicereus undatus HOM05D000806 ORTHO05D007429 7.1e-80 300.8 182 81.9
BraSC140t45575Z Brassica rapa HOM05D000806 ORTHO05D007429 4.6e-79 298.1 170 87.1
Hund28749 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.5e-77 293.1 182 80.2
Hund31110 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.5e-77 293.1 182 80.2
Thhalv10010960m.g Eutrema salsugineum HOM05D000806 ORTHO05D007429 9.6e-77 290.4 185 79.5
SEGI_09545 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 1.4e-75 286.6 185 75.7
Hund03830 Selenicereus undatus HOM05D000806 ORTHO05D007429 4.0e-75 285.0 182 78.6
AUR62004684 Chenopodium quinoa HOM05D000806 ORTHO05D002320 4.9e-73 278.1 158 84.8
Nitab4.5_0007680g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 5.4e-72 274.6 182 75.8
HanXRQChr16g0528981 Helianthus annuus HOM05D000806 ORTHO05D007429 9.3e-72 273.9 170 77.1
Hund28451 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.2e-71 273.5 182 76.9
Lalb_Chr23g0274521 Lupinus albus HOM05D000806 ORTHO05D007429 5.1e-70 268.1 185 74.1
Nn010s41444 Nelumbo nucifera HOM05D000806 ORTHO05D007429 5.1e-70 268.1 185 75.7
Lsat_1_v5_gn_9_43721 Lactuca sativa HOM05D000806 ORTHO05D007429 8.1e-68 260.8 185 71.9
BraSC25t45848Z Brassica rapa HOM05D000806 ORTHO05D007429 4.2e-64 248.4 141 84.4
Hund19837 Selenicereus undatus HOM05D000806 ORTHO05D007429 4.2e-64 248.4 182 69.8
TAR633G2212 Trochodendron aralioides HOM05D000890 ORTHO05D000697 3.5e-63 245.4 122 95.1
Potri.016G094067 Populus trichocarpa HOM05D000806 ORTHO05D007429 4.6e-63 245.0 133 85.7
Sc03g0009990 Simmondsia chinensis HOM05D000806 ORTHO05D007429 4.3e-61 238.4 130 86.2
Medtr0002s0680 Medicago truncatula HOM05D000806 ORTHO05D007429 9.6e-61 237.3 186 66.1
Peaxi162Scf00041g00229 Petunia axillaris HOM05D000806 ORTHO05D007429 1.2e-58 230.3 118 89.8
QL93p1043_0001 Quercus lobata HOM05D000806 ORTHO05D007429 1.5e-58 229.9 119 90.8
Hund22773 Selenicereus undatus HOM05D000806 ORTHO05D007429 3.4e-58 228.8 177 68.9
HanXRQChr02g0041571 Helianthus annuus HOM05D000806 ORTHO05D007429 5.8e-58 228.0 120 87.5
HanXRQChr10g0284241 Helianthus annuus HOM05D000806 ORTHO05D007429 5.8e-58 228.0 120 87.5
HanXRQChr13g0404911 Helianthus annuus HOM05D000806 ORTHO05D007429 5.8e-58 228.0 120 87.5
Sc22g0003430 Simmondsia chinensis HOM05D000806 ORTHO05D007429 2.9e-57 225.7 120 88.3
EL10Ac6g15047 Beta vulgaris HOM05D000806 ORTHO05D002324 4.9e-57 224.9 117 89.7
Gohir.A12G124900 Gossypium hirsutum HOM05D000806 ORTHO05D007429 8.4e-57 224.2 120 89.2
Ah.10g027160 Amaranthus hybridus HOM05D000806 ORTHO05D002324 4.2e-56 221.9 117 88.0
Gorai.011G115400 Gossypium raimondii HOM05D000806 ORTHO05D007429 2.1e-55 219.5 127 82.7
Eucgr.I02538 Eucalyptus grandis HOM05D000806 ORTHO05D007429 4.6e-55 218.4 120 85.8
Gorai.004G061100 Gossypium raimondii HOM05D000806 ORTHO05D007429 4.6e-55 218.4 154 68.2
HanXRQChr11g0345151 Helianthus annuus HOM05D000806 ORTHO05D007429 2.3e-54 216.1 120 84.2
BolSC46t61035H Brassica oleracea HOM05D000806 ORTHO05D007429 1.9e-53 213.0 120 86.7
BolSC47t61097H Brassica oleracea HOM05D000806 ORTHO05D007429 1.9e-53 213.0 120 86.7
AL2G21550 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 1.3e-52 210.3 119 85.7
Haze_07716 Corylus avellana HOM05D000806 ORTHO05D007429 2.1e-52 209.5 124 83.9
Gohir.D10G105733 Gossypium hirsutum HOM05D000806 ORTHO05D007429 3.7e-52 208.8 149 71.1
LjContig00318g0003161 Lotus japonicus HOM05D000806 ORTHO05D007429 6.3e-52 208.0 193 55.4
HanXRQChr15g0474091 Helianthus annuus HOM05D000806 ORTHO05D007429 1.8e-51 206.5 120 81.7
Gohir.A07G166934 Gossypium hirsutum HOM05D000806 ORTHO05D007429 6.9e-51 204.5 106 90.6
CDE02G2600 Ceratophyllum demersum HOM05D000806 ORTHO05D002320 9.0e-51 204.1 113 84.1
HanXRQChr09g0257581 Helianthus annuus HOM05D000806 ORTHO05D007429 1.1e-48 197.2 102 90.2
GSVIVG01030619001 Vitis vinifera HOM05D000806 ORTHO05D007429 2.5e-48 196.1 187 59.9
MCO14G322 Micromonas commoda HOM05D000806 ORTHO05D007429 1.6e-47 193.4 178 48.9
BolSC46t61000H Brassica oleracea HOM05D000806 ORTHO05D007429 7.9e-47 191.0 108 85.2
SEGI_10580 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 2.3e-46 189.5 127 73.2
SEGI_20028 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 5.1e-46 188.3 115 76.5
SEGI_23528 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 6.7e-46 188.0 119 73.9
Gohir.1Z049999 Gossypium hirsutum HOM05D000806 ORTHO05D002320 8.7e-46 187.6 98 89.8
Medtr4g034770 Medicago truncatula HOM05D000806 ORTHO05D002320 1.9e-45 186.4 184 51.1
Gohir.D01G102333 Gossypium hirsutum HOM05D000806 ORTHO05D002320 2.5e-45 186.0 98 88.8
Solyc00g500066.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 4.3e-45 185.3 103 84.5
Dinv29307 Davidia involucrata HOM05D001133 ORTHO05D000941 9.7e-45 184.1 97 88.7
SEGI_09273 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 1.6e-44 183.3 113 76.1
Solyc00g500019.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 1.6e-44 183.3 96 88.5
Dinv26731 Davidia involucrata HOM05D001133 ORTHO05D000941 2.2e-44 183.0 123 74.8
HanXRQChr08g0210351 Helianthus annuus HOM05D000806 ORTHO05D007429 3.7e-44 182.2 98 89.8
Sabra10G0056300 Salix brachista HOM05D000806 ORTHO05D002320 4.8e-44 181.8 123 76.4
Sopen07g012430 Solanum pennellii HOM05D000004 ORTHO05D002324 6.3e-44 181.4 94 88.3
VMungo0586G0001 Vigna mungo HOM05D000806 ORTHO05D007429 1.8e-43 179.9 190 55.3
QL93p0311_0018 Quercus lobata HOM05D000806 ORTHO05D002320 2.4e-43 179.5 97 86.6
Cfa021575 Carpinus fangiana HOM05D000806 ORTHO05D002324 4.1e-43 178.7 120 75.0
Lj2C1239T39 Lonicera japonica HOM05D000806 ORTHO05D002320 6.9e-43 177.9 96 88.5
SabraPtG0003400 Salix brachista HOM05D000806 ORTHO05D002324 9.1e-43 177.6 120 75.8
Hund31091 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.2e-42 177.2 182 53.3
EL10As1g23054 Beta vulgaris HOM05D000806 ORTHO05D002324 2.0e-42 176.4 95 86.3
ECA074G0009 Erigeron canadensis HOM05D000806 ORTHO05D002324 2.0e-42 176.4 95 83.2
ECA077G0001 Erigeron canadensis HOM05D000806 ORTHO05D002324 2.0e-42 176.4 95 83.2
Ah.09g227360 Amaranthus hybridus HOM05D000806 ORTHO05D007429 3.4e-42 175.6 98 83.7
CsaV3_UNG209270 Cucumis sativus L. HOM05D000806 ORTHO05D007429 3.4e-42 175.6 94 89.4
unitig_91.g26508 Utricularia gibba HOM05D000806 ORTHO05D002320 5.9e-42 174.9 163 57.7
Ah.10g027380 Amaranthus hybridus HOM05D000806 ORTHO05D007429 1.7e-41 173.3 94 85.1
Gorai.012G112600 Gossypium raimondii HOM05D000806 ORTHO05D007429 2.9e-41 172.6 186 53.8
Ah.10g027510 Amaranthus hybridus HOM05D000806 ORTHO05D002324 6.5e-41 171.4 95 83.2
Phvul.002G278112 Phaseolus vulgaris HOM05D000806 ORTHO05D007429 6.5e-41 171.4 189 53.4
HanXRQChr02g0038641 Helianthus annuus HOM05D000806 ORTHO05D007429 7.2e-40 167.9 120 70.8
Oeu062853.1 Olea europaea HOM05D000806 ORTHO05D007429 7.2e-40 167.9 176 55.1
Ah.03g144240 Amaranthus hybridus HOM05D000806 ORTHO05D002324 9.4e-40 167.5 92 83.7
vmacro22411 Vaccinium macrocarpon HOM05D000806 ORTHO05D007429 1.2e-39 167.2 90 83.3
HanXRQChr02g0044901 Helianthus annuus HOM05D000806 ORTHO05D007429 1.6e-39 166.8 111 74.8
CAN.G1478.9 Capsicum annuum HOM05D000806 ORTHO05D002320 2.7e-39 166.0 120 69.2
EL10Ac9g20703 Beta vulgaris HOM05D000806 ORTHO05D007429 3.6e-39 165.6 120 65.8
RhsimPtG0003100 Rhododendron simsii HOM05D000806 ORTHO05D002324 3.6e-39 165.6 103 71.8
Gorai.004G277000 Gossypium raimondii HOM05D000806 ORTHO05D007429 3.9e-38 162.2 87 88.5
Solyc10g045220.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 6.7e-38 161.4 117 68.4
Nitab4.5_0009663g0060 Nicotiana tabacum HOM05D000806 ORTHO05D007429 8.8e-38 161.0 131 61.8
SMO086G0044 Selaginella moellendorffii HOM05D000806 ORTHO05D007429 3.3e-37 159.1 174 49.4
Gohir.D11G225901 Gossypium hirsutum HOM05D000806 ORTHO05D007429 7.4e-37 157.9 94 74.5
Gohir.1Z050266 Gossypium hirsutum HOM05D000806 ORTHO05D002320 4.1e-35 152.1 86 82.6
Gohir.D04G129256 Gossypium hirsutum HOM05D000806 ORTHO05D002320 3.4e-34 149.1 88 80.7
Solyc04g039810.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 2.5e-32 142.9 167 50.9
Gorai.007G243500 Gossypium raimondii HOM05D000806 ORTHO05D007429 3.2e-32 142.5 91 72.5
Nn3g16863 Nelumbo nucifera HOM05D000806 ORTHO05D007429 2.6e-29 132.9 70 87.1
Nitab4.5_0004697g0020 Nicotiana tabacum HOM05D000806 ORTHO05D007429 3.3e-29 132.5 125 58.4
BraA10t43926Z Brassica rapa HOM05D000806 ORTHO05D007429 2.2e-28 129.8 81 77.8
Hund27898 Selenicereus undatus HOM05D000806 ORTHO05D002324 2.2e-28 129.8 78 78.2
Hund29706 Selenicereus undatus HOM05D000806 ORTHO05D002324 2.2e-28 129.8 78 78.2
Hund29710 Selenicereus undatus HOM05D000806 ORTHO05D002324 2.2e-28 129.8 78 78.2
Hund29827 Selenicereus undatus HOM05D000806 ORTHO05D002324 2.2e-28 129.8 78 78.2
Hund29835 Selenicereus undatus HOM05D000806 ORTHO05D002324 2.2e-28 129.8 78 78.2
Hund28893 Selenicereus undatus HOM05D000806 ORTHO05D002324 6.3e-28 128.3 77 77.9
Hund29727 Selenicereus undatus HOM05D000806 ORTHO05D002324 6.3e-28 128.3 77 77.9
Hund29858 Selenicereus undatus HOM05D000806 ORTHO05D002324 6.3e-28 128.3 77 77.9
Hund29866 Selenicereus undatus HOM05D000806 ORTHO05D002324 6.3e-28 128.3 77 77.9
Hund30695 Selenicereus undatus HOM05D000806 ORTHO05D002324 6.3e-28 128.3 77 77.9
EL10As15g24119 Beta vulgaris HOM05D000806 ORTHO05D002320 4.5e-26 122.1 96 64.6
Nitab4.5_0002181g0020 Nicotiana tabacum HOM05D006976 ORTHO05D008761 1.2e-23 114.0 156 44.9
Lalb_Chr25g0282881 Lupinus albus HOM05D000806 ORTHO05D007429 1.6e-23 113.6 64 85.9
Nn1g07435 Nelumbo nucifera HOM05D000806 ORTHO05D007429 3.0e-22 109.4 60 80.0
Hund10571 Selenicereus undatus HOM05D000806 ORTHO05D007429 4.0e-22 109.0 123 49.6
Sed0021403 Sechium edule HOM05D000806 ORTHO05D002324 6.7e-22 108.2 61 83.6
SEGI_39120 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 1.5e-21 107.1 70 67.1
arahy.Tifrunner.gnm1.ann1.YJGE71 Arachis hypogaea HOM05D000806 ORTHO05D007429 4.4e-21 105.5 62 77.4
Solyc05g016120.2 Solanum lycopersicum HOM05D001387 ORTHO05D001250 4.4e-21 105.5 111 53.2
CDE02G0843 Ceratophyllum demersum HOM05D001966 ORTHO05D007227 7.5e-21 104.8 62 77.4
arahy.Tifrunner.gnm1.ann1.Y8HZNS Arachis hypogaea HOM05D000806 ORTHO05D002320 1.3e-20 104.0 62 82.3
MD15G1388400 Malus domestica HOM05D000806 ORTHO05D007429 1.7e-20 103.6 62 82.3
BolSC29t60589H Brassica oleracea HOM05D000806 ORTHO05D007429 2.2e-20 103.2 60 81.7
FAN12G3683 Fragaria x ananassa HOM05D000681 ORTHO05D035426 2.8e-20 102.8 91 61.5
BolC9t55821H Brassica oleracea HOM05D000806 ORTHO05D007429 4.1e-19 99.0 60 76.7
BolC9t58296H Brassica oleracea HOM05D000806 ORTHO05D007429 4.1e-19 99.0 64 79.7
Nn021s41539 Nelumbo nucifera HOM05D000806 ORTHO05D007429 4.1e-19 99.0 118 50.8
ATR1137G001 Amborella trichopoda HOM05D000806 ORTHO05D007429 5.3e-19 98.6 55 83.6
arahy.Tifrunner.gnm1.ann1.X4SEM1 Arachis hypogaea HOM05D000540 ORTHO05D000681 5.3e-19 98.6 61 80.3
Ah.10g027920 Amaranthus hybridus HOM05D000806 ORTHO05D002324 2.7e-18 96.3 53 84.9
Ah.10g028630 Amaranthus hybridus HOM05D000806 ORTHO05D002324 2.7e-18 96.3 53 84.9
HanXRQChr11g0337941 Helianthus annuus HOM05D000806 ORTHO05D007429 4.5e-18 95.5 74 59.5
HanXRQChr09g0267831 Helianthus annuus HOM05D000806 ORTHO05D007429 7.7e-18 94.7 58 74.1
Nitab4.5_0010235g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 2.9e-17 92.8 78 57.7
TAR371G0631 Trochodendron aralioides HOM05D000806 ORTHO05D007429 3.8e-17 92.4 49 89.8
EL10As15g24117 Beta vulgaris HOM05D000806 ORTHO05D007429 2.5e-16 89.7 52 78.8
FAN17G0466 Fragaria x ananassa HOM05D000806 ORTHO05D007429 4.2e-16 89.0 93 53.8
CAN.G1163.7 Capsicum annuum HOM05D000806 ORTHO05D007429 6.8e-14 81.6 57 75.4
SEGI_02123 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 7.5e-13 78.2 49 75.5
SEGI_16956 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 3.7e-12 75.9 49 79.6
Hund08021 Selenicereus undatus HOM05D002432 ORTHO05D000695 6.3e-12 75.1 49 73.5
Sed0010807 Sechium edule HOM05D000806 ORTHO05D002320 1.7e-09 67.0 33 87.9
Sed0026664 Sechium edule HOM05D000806 ORTHO05D002320 1.7e-09 67.0 33 87.9
Migut.H00990 Erythranthe guttata HOM05D000806 ORTHO05D007429 5.0e-09 65.5 36 91.7
ClCG04G004710 Citrullus lanatus HOM05D001966 ORTHO05D007429 8.6e-09 64.7 32 87.5
SGA_v2.0_scaffold213G42216 Striga asiatica HOM05D000806 ORTHO05D007429 3.2e-08 62.8 36 72.2
FAN07G1499 Fragaria x ananassa HOM05D000806 ORTHO05D007429 6.1e-07 58.5 54 57.4


User provided reference genes

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