Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G6093 Papaver somniferum HOM05D005912 ORTHO05D007329 1.5e-206 722.6 368 100.0
PSO675G2300 Papaver somniferum HOM05D005912 ORTHO05D007329 7.5e-198 693.7 361 97.8
TAR625G0585 Trochodendron aralioides HOM05D005912 ORTHO05D007329 3.2e-124 449.1 370 61.9
Aqoxy6G01899 Aquilegia oxysepala HOM05D005912 ORTHO05D007329 1.5e-118 430.3 371 59.0
Sabra05G0087400 Salix brachista HOM05D005912 ORTHO05D007329 2.0e-118 429.9 369 59.1
TAR288G0001 Trochodendron aralioides HOM05D005912 ORTHO05D007329 2.6e-118 429.5 370 60.5
Dinv40154 Davidia involucrata HOM05D005912 ORTHO05D007329 1.4e-116 423.7 372 59.9
Potri.005G106500 Populus trichocarpa HOM05D005912 ORTHO05D007329 1.6e-115 420.2 370 58.9
CiPaw.08G179600 Carya illinoinensis HOM05D005912 ORTHO05D007329 1.0e-114 417.5 374 57.8
Haze_03689 Corylus avellana HOM05D005912 ORTHO05D007329 5.1e-114 415.2 375 56.5
Gohir.A02G175200 Gossypium hirsutum HOM05D005912 ORTHO05D007329 8.8e-114 414.5 374 56.4
Cfa007040 Carpinus fangiana HOM05D005912 ORTHO05D007329 1.1e-113 414.1 367 57.2
Thecc.01G010100 Theobroma cacao HOM05D005912 ORTHO05D007329 1.1e-113 414.1 330 60.3
Gorai.003G004900 Gossypium raimondii HOM05D005912 ORTHO05D007329 1.5e-113 413.7 374 56.1
Gohir.D03G004600 Gossypium hirsutum HOM05D005912 ORTHO05D007329 2.5e-113 412.9 376 56.4
Nn6g31870 Nelumbo nucifera HOM05D005912 ORTHO05D007329 7.4e-113 411.4 369 56.4
Duzib147G0472 Durio zibethinus HOM05D005912 ORTHO05D007329 2.8e-112 409.5 371 55.5
COL.COLO4_09868 Corchorus olitorius HOM05D005912 ORTHO05D007329 1.4e-111 407.1 330 58.8
Prupe.7G176300 Prunus persica HOM05D005912 ORTHO05D007329 1.2e-110 404.1 339 60.2
RcHm_v2.0_Chr2g0098181 Rosa chinensis HOM05D005912 ORTHO05D007329 1.5e-110 403.7 377 58.1
QL06p052316 Quercus lobata HOM05D005912 ORTHO05D007329 2.0e-110 403.3 286 67.1
FvH4_1g10920 Fragaria vesca HOM05D005912 ORTHO05D007329 3.4e-110 402.5 374 59.1
PGR102G2191 Punica granatum HOM05D005912 ORTHO05D007329 1.0e-109 401.0 376 55.1
MBI08_g40329_MAGBIO Magnolia biondii HOM05D005912 ORTHO05D007329 2.2e-109 399.8 374 57.0
Atru.chr3.926 Acer truncatum HOM05D005912 ORTHO05D007329 5.0e-109 398.7 374 56.1
ClCG01G020670 Citrullus lanatus HOM05D005912 ORTHO05D007329 5.0e-109 398.7 339 57.8
FAN26G2135 Fragaria x ananassa HOM05D005912 ORTHO05D007329 6.5e-109 398.3 374 58.6
FAN23G1227 Fragaria x ananassa HOM05D005912 ORTHO05D007329 1.1e-108 397.5 369 58.5
vmacro20502 Vaccinium macrocarpon HOM05D005912 ORTHO05D007329 4.2e-108 395.6 381 54.3
Sp7g33520 Schrenkiella parvula HOM05D005912 ORTHO05D007329 3.6e-107 392.5 331 58.6
Actinidia17396 Actinidia chinensis HOM05D005912 ORTHO05D007329 7.9e-107 391.3 369 56.4
Thhalv10025477m.g Eutrema salsugineum HOM05D005912 ORTHO05D007329 2.3e-106 389.8 367 55.6
MD02G1122300 Malus domestica HOM05D005912 ORTHO05D007329 1.5e-105 387.1 343 58.6
BolC1t00315H Brassica oleracea HOM05D005912 ORTHO05D007329 3.3e-105 386.0 298 62.1
Manes.01G152000 Manihot esculenta HOM05D005912 ORTHO05D007329 3.3e-105 386.0 350 59.4
CAN.G890.19 Capsicum annuum HOM05D005912 ORTHO05D007329 4.4e-105 385.6 369 55.0
A01p02950 Brassica napus HOM05D005912 ORTHO05D007329 5.7e-105 385.2 292 63.4
BraA01t00278Z Brassica rapa HOM05D005912 ORTHO05D007329 5.7e-105 385.2 292 63.4
THA.LOC104807519 Tarenaya hassleriana HOM05D005912 ORTHO05D007329 7.4e-105 384.8 377 52.5
Eucgr.J02496 Eucalyptus grandis HOM05D005912 ORTHO05D007329 1.3e-104 384.0 295 63.1
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 1.7e-104 383.6 367 56.1
CARHR244100 Cardamine hirsuta HOM05D005912 ORTHO05D007329 2.2e-104 383.3 331 57.4
Ciclev10025822m.g Citrus clementina HOM05D005912 ORTHO05D007329 2.2e-104 383.3 317 59.3
Cc07_g11440 Coffea canephora HOM05D005912 ORTHO05D007329 2.2e-104 383.3 344 57.0
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 2.8e-104 382.9 367 56.7
C01p03300 Brassica napus HOM05D005912 ORTHO05D007329 4.8e-104 382.1 325 58.8
TWI73G1263 Tripterygium wilfordii HOM05D005912 ORTHO05D007329 4.8e-104 382.1 373 53.6
Carub.0007s0449 Capsella rubella HOM05D005912 ORTHO05D007329 2.4e-103 379.8 366 54.4
CsaV3_6G047590 Cucumis sativus L. HOM05D005912 ORTHO05D007329 2.4e-103 379.8 295 61.7
Sed0007504 Sechium edule HOM05D005912 ORTHO05D007329 2.4e-103 379.8 349 53.9
PGSC0003DMG400001581 Solanum tuberosum HOM05D005912 ORTHO05D007329 4.1e-103 379.0 369 53.9
Ah.11g045130 Amaranthus hybridus HOM05D005912 ORTHO05D007329 9.1e-103 377.9 351 54.1
HanXRQChr07g0192501 Helianthus annuus HOM05D005912 ORTHO05D007329 9.1e-103 377.9 372 50.8
Sopen02g028060 Solanum pennellii HOM05D005912 ORTHO05D007329 2.6e-102 376.3 369 53.4
Rhsim10G0204000 Rhododendron simsii HOM05D005912 ORTHO05D007329 5.9e-102 375.2 302 60.3
Aa31LG6G12710 Aethionema arabicum HOM05D005912 ORTHO05D007329 2.2e-101 373.2 399 51.1
CSS0031078 Camellia sinensis var. sinensis HOM05D005912 ORTHO05D007329 2.2e-101 373.2 314 59.9
Solyc02g083270.4 Solanum lycopersicum HOM05D005912 ORTHO05D007329 3.8e-101 372.5 369 53.1
Lj2g0008610 Lotus japonicus HOM05D005912 ORTHO05D007329 1.4e-100 370.5 347 55.3
ECA238G3446 Erigeron canadensis HOM05D005912 ORTHO05D007329 2.5e-100 369.8 369 52.0
Glyma.11G082400 Glycine max HOM05D005912 ORTHO05D007329 3.2e-100 369.4 286 61.9
CDE06G1293 Ceratophyllum demersum HOM05D005912 ORTHO05D007329 5.5e-100 368.6 368 51.6
Phvul.002G112700 Phaseolus vulgaris HOM05D005912 ORTHO05D007329 7.2e-100 368.2 370 52.7
AUR62029896 Chenopodium quinoa HOM05D005912 ORTHO05D007329 9.4e-100 367.9 350 52.0
Lsat_1_v5_gn_2_75281 Lactuca sativa HOM05D005912 ORTHO05D007329 9.4e-100 367.9 335 54.9
Lj4A227T48 Lonicera japonica HOM05D005912 ORTHO05D007329 3.6e-99 365.9 371 53.9
arahy.Tifrunner.gnm1.ann1.JJKM7S Arachis hypogaea HOM05D005912 ORTHO05D007329 6.1e-99 365.2 325 56.9
arahy.Tifrunner.gnm1.ann1.TNL2KY Arachis hypogaea HOM05D005912 ORTHO05D007329 6.1e-99 365.2 325 56.9
Sc07g0001240 Simmondsia chinensis HOM05D005912 ORTHO05D007329 8.0e-99 364.8 355 52.1
Ca_24951_v3 Cicer arietinum L. HOM05D005912 ORTHO05D007329 1.5e-97 360.5 312 59.6
MSTRG.2738 Avicennia marina HOM05D005912 ORTHO05D007329 7.4e-97 358.2 383 50.7
BraA08t34122Z Brassica rapa HOM05D005912 ORTHO05D007329 7.4e-97 358.2 276 64.1
HanXRQChr14g0442051 Helianthus annuus HOM05D005912 ORTHO05D007329 9.7e-97 357.8 338 53.6
Lj2A487G56 Lonicera japonica HOM05D005912 ORTHO05D007329 1.3e-96 357.5 360 52.5
TPR.G25119 Trifolium pratense HOM05D005912 ORTHO05D007329 1.3e-96 357.5 308 57.1
ATR0661G434 Amborella trichopoda HOM05D005912 ORTHO05D007329 3.7e-96 355.9 355 50.1
EL10Ac5g11470 Beta vulgaris HOM05D005912 ORTHO05D007329 4.8e-96 355.5 337 53.4
Psat2g151360 Pisum sativum HOM05D005912 ORTHO05D007329 8.2e-96 354.8 305 57.4
Medtr5g023180 Medicago truncatula HOM05D005912 ORTHO05D007329 3.1e-95 352.8 364 52.2
Migut.L00742 Erythranthe guttata HOM05D005912 ORTHO05D007329 4.1e-95 352.4 370 51.4
AL7G15340 Arabidopsis lyrata HOM05D005912 ORTHO05D007329 4.5e-94 349.0 274 61.7
Zm00001eb002560 Zea mays HOM05D005912 ORTHO05D007329 2.2e-93 346.7 365 51.5
Lalb_Chr05g0212091 Lupinus albus HOM05D005912 ORTHO05D007329 3.8e-93 345.9 330 52.4
Os03g0131500 Oryza sativa ssp. japonica HOM05D005912 ORTHO05D007329 1.6e-91 340.5 327 55.0
AT4G35760 Arabidopsis thaliana HOM05D005912 ORTHO05D007329 8.0e-91 338.2 353 51.6
SalBow3G0555 Salvia bowleyana HOM05D005912 ORTHO05D007329 4.4e-89 332.4 353 49.6
HPP92_022166 Vanilla planifolia HOM05D005912 ORTHO05D007329 1.1e-87 327.8 286 55.2
AUR62033809 Chenopodium quinoa HOM05D005912 ORTHO05D007329 1.0e-85 321.2 263 55.9
Oeu012550.1 Olea europaea HOM05D005912 ORTHO05D007329 1.9e-84 317.0 300 54.0
SGA_v2.0_scaffold108G30993 Striga asiatica HOM05D005912 ORTHO05D007329 2.5e-84 316.6 353 47.6
GSVIVG01002335001 Vitis vinifera HOM05D005912 ORTHO05D007329 4.4e-81 305.8 305 55.4
CANSAT25G2212 Cannabis sativa HOM05D005912 ORTHO05D007329 6.3e-80 302.0 228 65.4
CDE03G0408 Ceratophyllum demersum HOM05D005912 ORTHO05D007329 2.5e-76 290.0 340 47.1
Cpa.g.sc6.326 Carica papaya HOM05D005912 ORTHO05D007329 1.2e-75 287.7 377 44.8
MELO3C007950.2 Cucumis melo HOM05D005912 ORTHO05D007329 3.6e-75 286.2 338 45.6
unitig_88.g27769 Utricularia gibba HOM05D005912 ORTHO05D007329 3.1e-66 256.5 232 55.6
SMO119G0150 Selaginella moellendorffii HOM05D005912 ORTHO05D007329 2.0e-65 253.8 291 43.3
Mapoly0023s0120 Marchantia polymorpha HOM05D005912 ORTHO05D007329 5.8e-65 252.3 307 45.0
CBR_g79494 Chara braunii HOM05D005912 ORTHO05D007329 4.1e-63 246.1 354 39.0
Pp3c3_30980 Physcomitrium patens HOM05D005912 ORTHO05D007329 1.6e-62 244.2 333 39.0
Glyma.01G161400 Glycine max HOM05D005912 ORTHO05D007329 2.5e-60 236.9 214 56.1
C03p80880 Brassica napus HOM05D000088 ORTHO05D000933 2.3e-58 230.3 292 46.2
A08p21710 Brassica napus HOM05D000088 ORTHO05D000933 3.1e-58 229.9 326 44.8
Peaxi162Scf00300g00017 Petunia axillaris HOM05D005912 ORTHO05D007329 4.0e-58 229.6 254 52.0
BolC3t20343H Brassica oleracea HOM05D000088 ORTHO05D000933 1.5e-57 227.6 292 46.2
BcaC01g00519 Brassica carinata HOM05D005912 ORTHO05D007329 4.9e-56 222.6 288 47.9
Migut.H02191 Erythranthe guttata HOM05D005912 ORTHO05D007329 4.1e-55 219.5 347 39.5
BcaNung05729 Brassica carinata HOM05D005912 ORTHO05D007329 3.3e-52 209.9 253 49.0
VMungo1215G0927 Vigna mungo HOM05D005912 ORTHO05D007329 2.8e-51 206.8 240 49.2
SGA_v2.0_scaffold132G34545 Striga asiatica HOM05D005912 ORTHO05D007329 1.2e-49 201.4 245 47.3
DCAR_011589 Daucus carota HOM05D005912 ORTHO05D007329 1.3e-48 198.0 246 48.0
MCO13G425 Micromonas commoda HOM05D005912 ORTHO05D007329 2.4e-47 193.7 321 37.7
Cre12.g493150 Chlamydomonas reinhardtii HOM05D005912 ORTHO05D007329 9.5e-44 181.8 310 34.5
PRCOL_00003732 Prasinoderma coloniale HOM05D005912 ORTHO05D007329 1.2e-43 181.4 288 39.2
SGA_v2.0_scaffold132G34543 Striga asiatica HOM05D005912 ORTHO05D007329 1.1e-39 168.3 119 62.2
Actinidia22932 Actinidia chinensis HOM05D005912 ORTHO05D007329 1.0e-37 161.8 197 44.7
SEGI_31957 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 3.3e-36 156.8 166 45.2
MSTRG.15589 Avicennia marina HOM05D005912 ORTHO05D007329 2.1e-35 154.1 109 66.1
Pp3c1_24560 Physcomitrium patens HOM05D005912 ORTHO05D007329 5.8e-33 146.0 144 47.2
Lj2A933T26 Lonicera japonica HOM05D005912 ORTHO05D007329 7.1e-31 139.0 133 55.6
arahy.Tifrunner.gnm1.ann1.SP2XL4 Arachis hypogaea HOM05D005912 ORTHO05D007329 1.9e-28 131.0 137 52.6
AagrBONN_evm.TU.Sc2ySwM_340.180 Anthoceros agrestis HOM05D005912 ORTHO05D007329 3.8e-24 116.7 204 32.8
AagrBONN_evm.TU.Sc2ySwM_228.1421 Anthoceros agrestis HOM05D005912 ORTHO05D007329 1.2e-22 111.7 160 36.9
Hma1.2p1_4017F.1_g338140 Hydrangea macrophylla HOM05D005912 ORTHO05D007329 5.1e-21 106.3 98 56.1
PRCOL_00002964 Prasinoderma coloniale HOM05D005912 ORTHO05D007329 1.9e-20 104.4 113 46.0
Peaxi162Scf56132g00003 Petunia axillaris HOM05D005912 ORTHO05D007329 1.8e-18 97.8 69 62.3
MD15G1236200 Malus domestica HOM05D005912 ORTHO05D007329 4.0e-18 96.7 70 61.4
FAN28G1872 Fragaria x ananassa HOM05D005912 ORTHO05D007329 2.0e-17 94.4 68 63.2
Gohir.D03G004450 Gossypium hirsutum HOM05D005912 ORTHO05D007329 3.8e-16 90.1 63 60.3
SEGI_22324 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 4.9e-16 89.7 63 60.3
Lj2P933T24 Lonicera japonica HOM05D005912 ORTHO05D007329 2.7e-14 84.0 53 64.2
Lj2A1074G31 Lonicera japonica HOM05D005912 ORTHO05D007329 8.7e-13 79.0 80 55.0
SEGI_06824 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 3.3e-12 77.0 106 38.7
MCO11G735 Micromonas commoda HOM05D005912 ORTHO05D007329 4.3e-12 76.6 99 37.4
unitig_88.g27770 Utricularia gibba HOM05D005912 ORTHO05D007329 1.3e-11 75.1 52 63.5
RcHm_v2.0_Chr4g0418411 Rosa chinensis HOM05D005912 ORTHO05D007329 5.5e-07 59.7 60 56.7
RcHm_v2.0_Chr7g0224811 Rosa chinensis HOM05D005912 ORTHO05D007329 1.6e-06 58.2 60 56.7


User provided reference genes

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