Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G5839 Papaver somniferum HOM05D000561 ORTHO05D008162 8.9e-160 567.0 309 100.0
PSO675G5921 Papaver somniferum HOM05D000561 ORTHO05D008162 5.6e-154 547.7 309 96.8
TAR628G0509 Trochodendron aralioides HOM05D000561 ORTHO05D008162 9.6e-114 414.1 278 74.8
Nn5g30201 Nelumbo nucifera HOM05D000561 ORTHO05D000514 5.8e-111 404.8 260 77.7
Atru.chr13.629 Acer truncatum HOM05D000561 ORTHO05D008162 2.9e-110 402.5 265 74.7
Atru.chr13.633 Acer truncatum HOM05D000561 ORTHO05D008162 2.9e-110 402.5 265 74.7
GSVIVG01009559001 Vitis vinifera HOM05D000561 ORTHO05D008162 7.1e-109 397.9 265 74.0
TAR625G0340 Trochodendron aralioides HOM05D000561 ORTHO05D008162 9.3e-109 397.5 258 75.6
Duzib116G0222 Durio zibethinus HOM05D000561 ORTHO05D008162 5.6e-106 388.3 302 66.9
Dinv39338 Davidia involucrata HOM05D000561 ORTHO05D008162 1.3e-105 387.1 276 70.7
CSS0036187 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D008162 1.1e-104 384.0 258 74.0
MD08G1106500 Malus domestica HOM05D000561 ORTHO05D008162 1.4e-104 383.6 268 72.0
Prupe.1G440800 Prunus persica HOM05D000561 ORTHO05D008162 3.1e-104 382.5 270 70.7
Actinidia22609 Actinidia chinensis HOM05D000561 ORTHO05D008162 6.9e-104 381.3 281 69.4
QL02p005893 Quercus lobata HOM05D000561 ORTHO05D008162 9.0e-104 380.9 271 71.6
MD15G1087100 Malus domestica HOM05D000561 ORTHO05D008162 7.6e-103 377.9 251 74.9
Aqoxy6G01386 Aquilegia oxysepala HOM05D000561 ORTHO05D008162 1.7e-102 376.7 251 74.1
CDE06G2652 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 1.7e-102 376.7 251 73.7
Hma1.2p1_0260F.1_g104740 Hydrangea macrophylla HOM05D000561 ORTHO05D008162 1.7e-102 376.7 279 66.7
RcHm_v2.0_Chr6g0307161 Rosa chinensis HOM05D000561 ORTHO05D008162 2.2e-102 376.3 265 71.7
MBI06_g08185_MAGBIO Magnolia biondii HOM05D000561 ORTHO05D008162 3.8e-102 375.6 317 61.8
TWI56G0230 Tripterygium wilfordii HOM05D000561 ORTHO05D008162 3.8e-102 375.6 266 70.3
CiPaw.16G047800 Carya illinoinensis HOM05D000561 ORTHO05D008162 3.2e-101 372.5 250 75.2
Potri.014G034700 Populus trichocarpa HOM05D000561 ORTHO05D008162 4.2e-101 372.1 265 68.3
vmacro21557 Vaccinium macrocarpon HOM05D000561 ORTHO05D008162 9.3e-101 370.9 263 70.7
Duzib093G1567 Durio zibethinus HOM05D000561 ORTHO05D008162 2.7e-100 369.4 280 66.4
Manes.05G170800 Manihot esculenta HOM05D000561 ORTHO05D008162 2.7e-100 369.4 263 72.2
Sed0001510 Sechium edule HOM05D000561 ORTHO05D008162 2.7e-100 369.4 266 69.2
Gohir.D05G203500 Gossypium hirsutum HOM05D000561 ORTHO05D008162 3.5e-100 369.0 247 73.3
Migut.C00604 Erythranthe guttata HOM05D000561 ORTHO05D008162 1.0e-99 367.5 280 66.4
Ciclev10001965m.g Citrus clementina HOM05D000561 ORTHO05D008162 3.9e-99 365.5 266 69.5
Cc10_g03990 Coffea canephora HOM05D000561 ORTHO05D008162 5.1e-99 365.2 264 66.7
MSTRG.1332 Avicennia marina HOM05D000561 ORTHO05D008162 6.7e-99 364.8 285 63.9
Gorai.009G209500 Gossypium raimondii HOM05D000561 ORTHO05D008162 5.7e-98 361.7 248 72.2
FvH4_2g34880 Fragaria vesca HOM05D000561 ORTHO05D008162 7.4e-98 361.3 258 72.9
Gohir.A05G200200 Gossypium hirsutum HOM05D000561 ORTHO05D008162 3.7e-97 359.0 247 72.1
Sabra14G0024600 Salix brachista HOM05D000561 ORTHO05D008162 4.8e-97 358.6 258 69.4
CAN.G371.47 Capsicum annuum HOM05D000561 ORTHO05D008162 8.2e-97 357.8 255 67.5
FAN27G1876 Fragaria x ananassa HOM05D000561 ORTHO05D008162 1.1e-96 357.5 285 67.7
Haze_17567 Corylus avellana HOM05D000561 ORTHO05D008162 2.4e-96 356.3 265 69.1
Thecc.08G013400 Theobroma cacao HOM05D000561 ORTHO05D008162 9.0e-96 354.4 271 66.4
ClCG08G015630 Citrullus lanatus HOM05D000561 ORTHO05D008162 1.5e-95 353.6 253 70.4
Rhsim06G0046600 Rhododendron simsii HOM05D000561 ORTHO05D008162 2.6e-95 352.8 276 65.6
MELO3C010892.2 Cucumis melo HOM05D000561 ORTHO05D008162 3.4e-95 352.4 265 68.3
CsaV3_2G028140 Cucumis sativus L. HOM05D000561 ORTHO05D008162 3.4e-95 352.4 243 72.4
Lalb_Chr08g0245641 Lupinus albus HOM05D000561 ORTHO05D008162 3.4e-95 352.4 283 63.6
ECA232G0584 Erigeron canadensis HOM05D000561 ORTHO05D008162 4.5e-95 352.1 274 64.6
COL.COLO4_26457 Corchorus olitorius HOM05D000561 ORTHO05D008162 5.8e-95 351.7 224 75.4
Lj1g0015016 Lotus japonicus HOM05D000561 ORTHO05D008162 5.8e-95 351.7 250 71.6
Medtr3g101350 Medicago truncatula HOM05D000561 ORTHO05D008162 7.6e-95 351.3 251 68.9
CARHR050650 Cardamine hirsuta HOM05D000561 ORTHO05D008162 1.7e-94 350.1 255 67.8
DCAR_019467 Daucus carota HOM05D000561 ORTHO05D008162 1.7e-94 350.1 283 63.6
Sopen04g032930 Solanum pennellii HOM05D000561 ORTHO05D008162 2.2e-94 349.7 266 64.3
Nitab4.5_0005549g0040 Nicotiana tabacum HOM05D000561 ORTHO05D008162 2.9e-94 349.4 243 70.0
Solyc04g079320.4 Solanum lycopersicum HOM05D000561 ORTHO05D008162 3.8e-94 349.0 258 65.9
arahy.Tifrunner.gnm1.ann1.YYC1CT Arachis hypogaea HOM05D000561 ORTHO05D008162 6.5e-94 348.2 253 69.6
Manes.18G034000 Manihot esculenta HOM05D000561 ORTHO05D008162 8.4e-94 347.8 258 70.2
Sp4g07760 Schrenkiella parvula HOM05D000561 ORTHO05D008162 1.1e-93 347.4 256 67.6
Nitab4.5_0000068g0440 Nicotiana tabacum HOM05D000561 ORTHO05D008162 2.5e-93 346.3 243 69.1
Psat5g044440 Pisum sativum HOM05D000561 ORTHO05D008162 9.3e-93 344.4 250 68.4
Glyma.06G037300 Glycine max HOM05D000561 ORTHO05D008162 1.2e-92 344.0 247 70.0
TPR.G10521 Trifolium pratense HOM05D000561 ORTHO05D008162 1.6e-92 343.6 266 65.0
Zm00001eb006450 Zea mays HOM05D000561 ORTHO05D008162 1.6e-92 343.6 253 66.8
Carub.0003s2738 Capsella rubella HOM05D000561 ORTHO05D008162 6.1e-92 341.7 280 61.8
HanXRQChr02g0038741 Helianthus annuus HOM05D000561 ORTHO05D008162 1.8e-91 340.1 279 60.9
THA.LOC104803685 Tarenaya hassleriana HOM05D000561 ORTHO05D008162 1.8e-91 340.1 250 64.0
SGA_v2.0_scaffold71G24043 Striga asiatica HOM05D000561 ORTHO05D008162 3.0e-91 339.3 261 65.9
Aa31LG10G9880 Aethionema arabicum HOM05D000561 ORTHO05D008162 3.9e-91 339.0 262 63.7
Os03g0186100 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D008162 5.1e-91 338.6 257 65.0
Sabra02G0100300 Salix brachista HOM05D000561 ORTHO05D008162 6.7e-91 338.2 245 69.8
AL4G19400 Arabidopsis lyrata HOM05D000561 ORTHO05D008162 1.5e-90 337.0 253 66.4
Phvul.009G063100 Phaseolus vulgaris HOM05D000561 ORTHO05D008162 1.5e-90 337.0 255 66.7
HPP92_011186 Vanilla planifolia HOM05D000561 ORTHO05D008162 2.5e-90 336.3 267 63.7
SalBow7G2378 Salvia bowleyana HOM05D000561 ORTHO05D008162 7.4e-90 334.7 320 55.3
Migut.O00512 Erythranthe guttata HOM05D000561 ORTHO05D008162 1.6e-89 333.6 312 54.8
HanXRQChr09g0268001 Helianthus annuus HOM05D000561 ORTHO05D008162 2.2e-89 333.2 267 62.2
EL10Ac1g01805 Beta vulgaris HOM05D000561 ORTHO05D008162 1.1e-88 330.9 277 64.3
AT2G26540 Arabidopsis thaliana HOM05D000561 ORTHO05D008162 1.8e-88 330.1 282 61.3
Peaxi162Scf00566g00219 Petunia axillaris HOM05D000561 ORTHO05D008162 1.8e-88 330.1 239 68.6
Lsat_1_v5_gn_1_20480 Lactuca sativa HOM05D000561 ORTHO05D008162 2.4e-88 329.7 283 59.0
Ca_15966_v3 Cicer arietinum L. HOM05D000561 ORTHO05D008162 1.2e-87 327.4 243 66.7
A09p55150 Brassica napus HOM05D000561 ORTHO05D008162 4.5e-87 325.5 267 61.4
C08p38080 Brassica napus HOM05D000561 ORTHO05D008162 7.7e-87 324.7 267 61.4
Lsat_1_v5_gn_4_124200 Lactuca sativa HOM05D000561 ORTHO05D008162 1.3e-86 323.9 269 61.0
BraA09t40923Z Brassica rapa HOM05D000561 ORTHO05D008162 1.7e-86 323.6 267 61.4
BcaB08g35302 Brassica carinata HOM05D000561 ORTHO05D008162 2.2e-86 323.2 260 61.9
BolC8t51383H Brassica oleracea HOM05D000561 ORTHO05D008162 3.8e-86 322.4 260 62.3
PGR031G3300 Punica granatum HOM05D000561 ORTHO05D008162 5.0e-86 322.0 226 67.7
Eucgr.F02370 Eucalyptus grandis HOM05D000561 ORTHO05D008162 4.2e-85 318.9 224 70.1
FAN20G2490 Fragaria x ananassa HOM05D000561 ORTHO05D008162 2.1e-84 316.6 347 52.7
ATR0087G004 Amborella trichopoda HOM05D000561 ORTHO05D008162 5.1e-83 312.0 223 67.3
Thhalv10001252m.g Eutrema salsugineum HOM05D000561 ORTHO05D008162 5.1e-83 312.0 260 62.3
BcaC07g40815 Brassica carinata HOM05D000561 ORTHO05D008162 6.7e-83 311.6 259 61.0
Hund26617 Selenicereus undatus HOM05D000561 ORTHO05D008162 9.1e-80 301.2 387 45.5
Ah.06g192790 Amaranthus hybridus HOM05D000561 ORTHO05D008162 9.4e-77 291.2 286 57.0
VMungo1309G1588 Vigna mungo HOM05D000561 ORTHO05D008162 2.3e-75 286.6 232 62.9
Lj4A51T47 Lonicera japonica HOM05D000561 ORTHO05D008162 2.2e-73 280.0 186 73.1
Pp3c9_18350 Physcomitrium patens HOM05D000561 ORTHO05D008162 1.1e-72 277.7 255 53.3
Mapoly0101s0072 Marchantia polymorpha HOM05D000561 ORTHO05D008162 1.8e-72 276.9 259 55.6
Cpa.g.sc64.2 Carica papaya HOM05D000561 ORTHO05D008162 1.6e-71 273.9 186 72.0
AUR62022458 Chenopodium quinoa HOM05D000561 ORTHO05D008162 7.7e-71 271.6 227 63.0
AagrBONN_evm.TU.Sc2ySwM_228.1283 Anthoceros agrestis HOM05D000561 ORTHO05D008162 5.0e-70 268.9 242 55.4
Glyma.04G037000 Glycine max HOM05D000561 ORTHO05D008162 3.6e-68 262.7 194 68.6
SEGI_40608 Sequoiadendron giganteum HOM05D000561 ORTHO05D008162 4.7e-68 262.3 212 60.4
ECA247G1201 Erigeron canadensis HOM05D000561 ORTHO05D000514 5.7e-66 255.4 198 62.1
AUR62040067 Chenopodium quinoa HOM05D000561 ORTHO05D008162 1.8e-64 250.4 284 51.4
Carub.0004s0671 Capsella rubella HOM05D000561 ORTHO05D008162 2.0e-63 246.9 258 55.0
SMO367G0032 Selaginella moellendorffii HOM05D000561 ORTHO05D008162 1.7e-62 243.8 234 53.0
SHI08313 Sapria himalayana HOM05D000561 ORTHO05D008162 2.2e-62 243.4 250 52.4
CBR_g12178 Chara braunii HOM05D000561 ORTHO05D008162 2.2e-57 226.9 269 45.7
Sc26g0003980 Simmondsia chinensis HOM05D000561 ORTHO05D008162 1.6e-55 220.7 169 64.5
Cre09.g409100 Chlamydomonas reinhardtii HOM05D000561 ORTHO05D008162 3.2e-53 213.0 247 46.6
CDE10G0258 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 4.2e-53 212.6 156 65.4
Migut.N02692 Erythranthe guttata HOM05D000561 ORTHO05D008162 1.0e-51 208.0 174 58.6
MCO15G161 Micromonas commoda HOM05D000561 ORTHO05D008162 8.8e-51 204.9 278 43.5
arahy.Tifrunner.gnm1.ann1.96H4RR Arachis hypogaea HOM05D000561 ORTHO05D008162 4.5e-47 192.6 139 70.5
unitig_32.g11128 Utricularia gibba HOM05D000561 ORTHO05D008162 2.3e-46 190.3 143 64.3
PRCOL_00005348 Prasinoderma coloniale HOM05D000561 ORTHO05D008162 2.5e-45 186.8 247 43.7
SGA_v2.0_scaffold217G42442 Striga asiatica HOM05D000561 ORTHO05D008162 1.2e-39 167.9 119 66.4
Lsat_1_v5_gn_2_45600 Lactuca sativa HOM05D000561 ORTHO05D008162 1.7e-33 147.5 203 40.4
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 3.6e-28 129.8 163 44.2
SGA_v2.0_scaffold217G42441 Striga asiatica HOM05D000561 ORTHO05D008162 1.9e-24 117.5 79 72.2
Lsat_1_v5_gn_5_39421 Lactuca sativa HOM05D000487 ORTHO05D048384 3.8e-17 93.2 77 54.5
PGSC0003DMG400030254 Solanum tuberosum HOM05D000561 ORTHO05D008162 5.1e-06 56.2 36 72.2


User provided reference genes

Program Settings