Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 1.8e-153 545.8 268 100.0
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 1.3e-87 327.0 285 59.6
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 1.3e-85 320.5 219 68.5
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 4.5e-83 312.0 206 69.4
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 5.8e-83 311.6 207 69.1
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 4.9e-82 308.5 206 69.4
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 3.2e-81 305.8 207 67.1
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 2.1e-80 303.1 207 67.6
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 2.7e-80 302.8 207 67.6
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 6.0e-80 301.6 254 58.3
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.3e-79 300.4 203 68.5
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 3.9e-79 298.9 205 67.3
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 5.1e-79 298.5 279 55.9
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 5.1e-79 298.5 207 68.6
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 6.7e-79 298.1 222 64.0
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 8.7e-79 297.7 246 59.3
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 5.6e-78 295.0 238 61.3
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 5.6e-78 295.0 205 68.3
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 9.6e-78 294.3 242 57.9
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 9.6e-78 294.3 208 63.9
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 2.1e-77 293.1 227 59.0
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 3.7e-77 292.4 279 55.9
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 1.1e-76 290.8 210 64.3
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 1.8e-76 290.0 206 66.5
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 1.8e-76 290.0 227 61.7
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 3.1e-76 289.3 211 64.9
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 3.1e-76 289.3 256 55.5
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 4.0e-76 288.9 233 60.5
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 4.0e-76 288.9 241 60.6
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 5.3e-76 288.5 238 59.7
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 6.9e-76 288.1 224 59.4
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 9.0e-76 287.7 248 57.3
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 2.0e-75 286.6 193 68.4
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 2.6e-75 286.2 228 58.3
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 2.6e-75 286.2 213 64.3
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 2.6e-75 286.2 224 60.3
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 3.4e-75 285.8 270 52.2
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 4.5e-75 285.4 272 50.4
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 4.5e-75 285.4 206 63.1
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 4.5e-75 285.4 208 63.9
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 5.8e-75 285.0 207 64.7
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 7.6e-75 284.6 263 52.1
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 7.6e-75 284.6 210 62.4
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 1.3e-74 283.9 249 53.0
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 1.3e-74 283.9 250 53.2
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 2.2e-74 283.1 206 62.1
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 2.2e-74 283.1 208 63.0
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 2.9e-74 282.7 207 60.9
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 3.8e-74 282.3 250 53.6
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 3.8e-74 282.3 203 65.5
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 3.8e-74 282.3 214 61.2
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 3.8e-74 282.3 276 51.8
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 1.1e-73 280.8 202 63.9
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 1.4e-73 280.4 249 53.0
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 1.9e-73 280.0 250 53.2
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 2.5e-73 279.6 182 74.2
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 4.2e-73 278.9 207 60.4
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 4.2e-73 278.9 211 60.7
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 7.1e-73 278.1 226 55.8
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 9.3e-73 277.7 205 63.4
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 1.2e-72 277.3 233 59.2
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 1.6e-72 276.9 206 63.1
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 2.1e-72 276.6 260 51.2
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 3.5e-72 275.8 212 59.4
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 7.9e-72 274.6 214 58.4
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 7.9e-72 274.6 224 55.8
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 1.8e-71 273.5 252 53.2
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 1.9e-70 270.0 206 60.2
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 7.4e-70 268.1 206 59.2
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 3.7e-69 265.8 251 53.8
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 3.1e-68 262.7 210 58.1
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 2.5e-65 253.1 191 62.8
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 7.9e-64 248.1 207 58.9
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 1.5e-62 243.8 182 60.4
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 1.2e-59 234.2 165 66.7
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 2.0e-59 233.4 221 50.7
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 3.4e-59 232.6 177 61.6
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 4.5e-59 232.3 215 54.0
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 3.2e-57 226.1 185 57.8
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 7.2e-57 224.9 215 50.2
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 1.6e-56 223.8 170 61.2
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 6.7e-55 218.4 202 53.5
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 7.4e-54 214.9 203 49.3
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 4.8e-53 212.2 199 50.8
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 2.6e-51 206.5 185 55.1
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 4.5e-51 205.7 141 67.4
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 5.0e-50 202.2 202 53.0
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 3.2e-49 199.5 274 42.3
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 3.6e-48 196.1 224 46.0
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 3.1e-44 183.0 141 60.3
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 2.4e-36 156.8 155 52.9
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 3.1e-36 156.4 110 62.7
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 3.4e-30 136.3 105 57.1
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 7.5e-30 135.2 204 35.8
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 1.3e-29 134.4 120 54.2
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 2.7e-27 126.7 166 40.4
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 7.7e-27 125.2 146 42.5
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 2.3e-23 113.6 117 48.7
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 3.7e-21 106.3 208 37.0
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.4e-20 104.4 102 50.0
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 2.4e-20 103.6 78 62.8
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 6.6e-18 95.5 202 31.7
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 1.7e-10 70.9 78 46.2
MELO3C019639.2 Cucumis melo HOM05D007250 ORTHO05D009162 4.7e-08 62.8 41 65.9
QL04p088027 Quercus lobata HOM05D037085 ORTHO05D009162 1.0e-07 61.6 54 48.1


User provided reference genes

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