Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G3645 Papaver somniferum HOM05D001568 ORTHO05D009161 1.5e-109 399.4 193 100.0
PSO541G2903 Papaver somniferum HOM05D001568 ORTHO05D009161 2.0e-69 266.2 149 81.9
PSO675G4557 Papaver somniferum HOM05D001568 ORTHO05D009161 5.9e-69 264.6 150 81.3
TAR625G0338 Trochodendron aralioides HOM05D001568 ORTHO05D009161 8.5e-60 234.2 146 73.3
FvH4_2g03390 Fragaria vesca HOM05D001568 ORTHO05D009161 1.8e-57 226.5 139 72.7
Nitab4.5_0001458g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 3.9e-57 225.3 143 72.7
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 8.8e-57 224.2 139 72.7
Nn5g30651 Nelumbo nucifera HOM05D001568 ORTHO05D009161 1.1e-56 223.8 148 68.2
FvH4_2g03350 Fragaria vesca HOM05D001568 ORTHO05D009161 2.0e-56 223.0 139 71.9
FAN27G2772 Fragaria x ananassa HOM05D001568 ORTHO05D009161 2.6e-56 222.6 139 71.9
FAN15G0831 Fragaria x ananassa HOM05D001568 ORTHO05D009161 3.3e-56 222.2 139 71.9
RcHm_v2.0_Chr6g0248511 Rosa chinensis HOM05D001568 ORTHO05D009161 3.3e-56 222.2 139 71.9
QL11p029372 Quercus lobata HOM05D001568 ORTHO05D009161 4.4e-56 221.9 148 66.9
CAN.G1427.5 Capsicum annuum HOM05D001568 ORTHO05D009161 9.7e-56 220.7 139 74.8
Nitab4.5_0011705g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 9.7e-56 220.7 139 74.1
Aqoxy5G00361 Aquilegia oxysepala HOM05D001568 ORTHO05D009161 1.3e-55 220.3 163 66.9
Cc00_g18000 Coffea canephora HOM05D001568 ORTHO05D009161 1.3e-55 220.3 147 67.3
Cfa004703 Carpinus fangiana HOM05D001568 ORTHO05D009161 3.7e-55 218.8 143 67.8
Prupe.8G149700 Prunus persica HOM05D001568 ORTHO05D009161 3.7e-55 218.8 139 69.8
Solyc10g048190.1 Solanum lycopersicum HOM05D001568 ORTHO05D009161 4.8e-55 218.4 139 71.9
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 6.3e-55 218.0 143 67.8
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 6.3e-55 218.0 142 69.7
FAN24G0656 Fragaria x ananassa HOM05D001568 ORTHO05D009161 6.3e-55 218.0 139 70.5
MD10G1109900 Malus domestica HOM05D001568 ORTHO05D009161 1.8e-54 216.5 138 70.3
Peaxi162Scf00003g02812 Petunia axillaris HOM05D001568 ORTHO05D009161 1.8e-54 216.5 139 69.8
Potri.009G085700 Populus trichocarpa HOM05D001568 ORTHO05D009161 1.8e-54 216.5 151 63.6
PGSC0003DMG400012841 Solanum tuberosum HOM05D001568 ORTHO05D009161 1.8e-54 216.5 143 69.9
Prupe.8G150000 Prunus persica HOM05D001568 ORTHO05D009161 2.4e-54 216.1 147 66.7
Duzib132G0829 Durio zibethinus HOM05D001568 ORTHO05D009161 5.3e-54 214.9 139 66.9
Rhsim05G0092800 Rhododendron simsii HOM05D001568 ORTHO05D009161 5.3e-54 214.9 147 68.0
Sabra09G0065800 Salix brachista HOM05D001568 ORTHO05D009161 5.3e-54 214.9 146 66.4
CiPaw.06G164200 Carya illinoinensis HOM05D001568 ORTHO05D009161 7.0e-54 214.5 147 63.3
MBI16_g39097_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 9.1e-54 214.2 139 70.5
Gohir.A13G047700 Gossypium hirsutum HOM05D001568 ORTHO05D009161 1.2e-53 213.8 140 67.9
Atru.chr5.2303 Acer truncatum HOM05D001568 ORTHO05D009161 2.0e-53 213.0 145 65.5
CARHR286340 Cardamine hirsuta HOM05D001568 ORTHO05D009161 2.0e-53 213.0 151 64.9
THA.LOC104804397 Tarenaya hassleriana HOM05D001568 ORTHO05D009161 3.5e-53 212.2 153 63.4
Duzib248G0869 Durio zibethinus HOM05D001568 ORTHO05D009161 4.5e-53 211.8 139 66.9
Gorai.013G051500 Gossypium raimondii HOM05D001568 ORTHO05D009161 4.5e-53 211.8 140 66.4
Gohir.D13G046000 Gossypium hirsutum HOM05D001568 ORTHO05D009161 5.9e-53 211.5 140 66.4
Thhalv10023010m.g Eutrema salsugineum HOM05D001568 ORTHO05D009161 2.2e-52 209.5 146 66.4
Carub.0003s2869 Capsella rubella HOM05D001568 ORTHO05D009161 2.9e-52 209.1 146 64.4
A07p05850 Brassica napus HOM05D001568 ORTHO05D009161 5.0e-52 208.4 150 64.7
A07p05700 Brassica napus HOM05D001568 ORTHO05D009161 6.5e-52 208.0 150 64.7
BraA07t28378Z Brassica rapa HOM05D001568 ORTHO05D009161 6.5e-52 208.0 150 64.7
Thecc.02G119600 Theobroma cacao HOM05D001568 ORTHO05D009161 6.5e-52 208.0 139 66.2
Lalb_Chr20g0110071 Lupinus albus HOM05D001568 ORTHO05D009161 8.5e-52 207.6 152 62.5
COL.COLO4_32488 Corchorus olitorius HOM05D001568 ORTHO05D009161 1.1e-51 207.2 143 65.0
CANSAT25G2862 Cannabis sativa HOM05D001568 ORTHO05D009161 1.9e-51 206.5 145 63.4
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 1.9e-51 206.5 139 66.2
Sp3g27770 Schrenkiella parvula HOM05D001568 ORTHO05D009161 2.5e-51 206.1 147 66.0
AT2G14660 Arabidopsis thaliana HOM05D001568 ORTHO05D009161 4.2e-51 205.3 149 65.1
AL3G46300 Arabidopsis lyrata HOM05D001568 ORTHO05D009161 5.5e-51 204.9 147 66.0
BcaC06g36001 Brassica carinata HOM05D001568 ORTHO05D009161 5.5e-51 204.9 150 64.0
C07p09120 Brassica napus HOM05D001568 ORTHO05D009161 5.5e-51 204.9 150 64.0
BolC7t41323H Brassica oleracea HOM05D001568 ORTHO05D009161 5.5e-51 204.9 150 64.0
BraA07t28366Z Brassica rapa HOM05D001568 ORTHO05D009161 1.2e-50 203.8 151 64.2
TPR.G8318 Trifolium pratense HOM05D001568 ORTHO05D009161 2.7e-50 202.6 139 68.3
Manes.10G086600 Manihot esculenta HOM05D001568 ORTHO05D009161 8.0e-50 201.1 159 57.2
Actinidia27999 Actinidia chinensis HOM05D001568 ORTHO05D009161 2.3e-49 199.5 131 68.7
Cpa.g.sc91.59 Carica papaya HOM05D001568 ORTHO05D009161 2.3e-49 199.5 158 61.4
CDE07G0917 Ceratophyllum demersum HOM05D001568 ORTHO05D009161 3.0e-49 199.1 140 66.4
Medtr5g005350 Medicago truncatula HOM05D001568 ORTHO05D009161 3.0e-49 199.1 146 67.1
BcaB05g22586 Brassica carinata HOM05D001568 ORTHO05D009161 6.8e-49 198.0 144 66.0
MELO3C018021.2 Cucumis melo HOM05D001568 ORTHO05D009161 6.8e-49 198.0 145 64.1
Sc01g0002530 Simmondsia chinensis HOM05D001568 ORTHO05D009161 6.8e-49 198.0 142 63.4
ClCG10G010070 Citrullus lanatus HOM05D001568 ORTHO05D009161 8.8e-49 197.6 144 63.9
TWI59G0351 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 8.8e-49 197.6 142 64.8
Migut.B00461 Erythranthe guttata HOM05D001568 ORTHO05D009161 1.5e-48 196.8 142 66.9
HanXRQChr10g0305111 Helianthus annuus HOM05D001568 ORTHO05D009161 1.5e-48 196.8 144 63.9
TWI23G0417 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 2.0e-48 196.4 142 64.1
unitig_0.g633 Utricularia gibba HOM05D001568 ORTHO05D009161 2.0e-48 196.4 140 65.7
CsaV3_4G000110 Cucumis sativus L. HOM05D001568 ORTHO05D009161 2.6e-48 196.1 171 56.1
MSTRG.20237 Avicennia marina HOM05D001568 ORTHO05D009161 3.4e-48 195.7 141 67.4
PGR142G3835 Punica granatum HOM05D001568 ORTHO05D009161 7.5e-48 194.5 150 59.3
Lsat_1_v5_gn_5_117140 Lactuca sativa HOM05D001568 ORTHO05D009161 9.7e-48 194.1 139 65.5
Ah.08g217180 Amaranthus hybridus HOM05D001035 ORTHO05D001045 2.2e-47 193.0 146 61.6
Glyma.01G241600 Glycine max HOM05D001568 ORTHO05D009161 2.8e-47 192.6 139 64.7
Sed0014293 Sechium edule HOM05D001568 ORTHO05D009161 3.7e-47 192.2 145 62.8
Lj1g0027535 Lotus japonicus HOM05D001568 ORTHO05D009161 6.3e-47 191.4 139 64.7
SGA_v2.0_scaffold32G12987 Striga asiatica HOM05D001568 ORTHO05D009161 6.3e-47 191.4 140 62.9
Phvul.002G050900 Phaseolus vulgaris HOM05D001568 ORTHO05D009161 3.1e-46 189.1 136 65.4
VMungo1215G1258 Vigna mungo HOM05D001568 ORTHO05D009161 1.2e-45 187.2 136 65.4
EL10Ac1g00245 Beta vulgaris HOM05D001568 ORTHO05D009161 2.2e-44 183.0 136 64.0
CSS0003584 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D009161 5.0e-44 181.8 145 60.0
ATR0739G196 Amborella trichopoda HOM05D001568 ORTHO05D009161 1.1e-43 180.6 150 58.7
HPP92_015706 Vanilla planifolia HOM05D001568 ORTHO05D009161 4.2e-43 178.7 142 58.5
HPP92_026656 Vanilla planifolia HOM05D001568 ORTHO05D009161 4.2e-43 178.7 142 58.5
SHI05019 Sapria himalayana HOM05D001568 ORTHO05D009161 4.7e-42 175.3 146 54.8
MBI16_g27033_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 6.1e-42 174.9 139 59.0
SEGI_07672 Sequoiadendron giganteum HOM05D001568 ORTHO05D009161 7.5e-40 167.9 135 58.5
Os03g0676100 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D009161 1.2e-37 160.6 156 49.4
Zm00001eb217400 Zea mays HOM05D001568 ORTHO05D009161 3.6e-34 149.1 150 49.3
Medtr8g027785 Medicago truncatula HOM05D001568 ORTHO05D009161 4.7e-34 148.7 146 52.1
AagrBONN_evm.TU.Sc2ySwM_117.3519 Anthoceros agrestis HOM05D001568 ORTHO05D009161 6.1e-34 148.3 133 53.4
CBR_g38178 Chara braunii HOM05D001568 ORTHO05D009161 6.1e-34 148.3 134 54.5
Lj9P337T35 Lonicera japonica HOM05D001568 ORTHO05D009161 6.1e-34 148.3 107 61.7
Mapoly0117s0004 Marchantia polymorpha HOM05D001568 ORTHO05D009161 1.4e-33 147.1 142 50.7
Pp3c10_11040 Physcomitrium patens HOM05D001568 ORTHO05D009161 3.7e-31 139.0 140 47.9
Sopen10g020220 Solanum pennellii HOM05D001568 ORTHO05D009161 1.1e-30 137.5 96 66.7
AUR62004510 Chenopodium quinoa HOM05D001568 ORTHO05D009161 2.5e-27 126.3 96 59.4
AUR62023444 Chenopodium quinoa HOM05D001568 ORTHO05D009161 2.5e-27 126.3 103 55.3
Psat4g228720 Pisum sativum HOM05D001568 ORTHO05D009161 4.3e-27 125.6 107 55.1
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 4.0e-25 119.0 139 46.8
Oeu037289.1 Olea europaea HOM05D001568 ORTHO05D009161 2.6e-24 116.3 141 47.5
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 5.0e-20 102.1 141 41.1
BcaB03g16261 Brassica carinata HOM05D001568 ORTHO05D009161 7.3e-19 98.2 179 33.0
MCO07G364 Micromonas commoda HOM05D001568 ORTHO05D009161 3.1e-17 92.8 177 33.9
ECA234G4452 Erigeron canadensis HOM05D000058 ORTHO05D000255 1.5e-16 90.5 81 56.8
MD05G1105400 Malus domestica HOM05D001568 ORTHO05D009161 1.3e-15 87.4 75 54.7
Os08g0485300 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D009161 2.4e-14 83.2 103 42.7
Cre12.g497650 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D009161 1.6e-13 80.5 167 31.7
COL.COLO4_02194 Corchorus olitorius HOM05D001568 ORTHO05D009161 7.6e-08 61.6 102 35.3
Cfa026913 Carpinus fangiana HOM05D001568 ORTHO05D009161 5.4e-06 55.5 183 27.9


User provided reference genes

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