Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G3435 Papaver somniferum HOM05D007161 ORTHO05D009103 7.0e-61 237.7 175 100.0
PSO017G0728 Papaver somniferum HOM05D007161 ORTHO05D009103 2.3e-56 222.6 176 95.5
CSS0009196 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 6.6e-27 124.8 124 85.5
CSS0029825 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 6.6e-27 124.8 124 85.5
Atru.chr9.557 Acer truncatum HOM05D007161 ORTHO05D009103 4.3e-26 122.1 170 70.6
Lsat_1_v5_gn_5_22381 Lactuca sativa HOM05D007161 ORTHO05D009103 4.3e-26 122.1 160 71.2
Peaxi162Scf00201g00331 Petunia axillaris HOM05D007161 ORTHO05D009103 7.3e-26 121.3 168 70.8
Nitab4.5_0001485g0090 Nicotiana tabacum HOM05D007161 ORTHO05D009103 9.5e-26 120.9 169 71.6
THA.LOC104801155 Tarenaya hassleriana HOM05D007161 ORTHO05D009103 9.5e-26 120.9 167 67.1
vmacro17616 Vaccinium macrocarpon HOM05D007161 ORTHO05D009103 1.6e-25 120.2 129 81.4
Manes.06G083700 Manihot esculenta HOM05D007161 ORTHO05D009103 6.2e-25 118.2 160 72.5
Rhsim08G0144900 Rhododendron simsii HOM05D007161 ORTHO05D009103 6.2e-25 118.2 161 71.4
Haze_07737 Corylus avellana HOM05D007161 ORTHO05D009103 1.4e-24 117.1 176 67.6
Dinv22772 Davidia involucrata HOM05D007161 ORTHO05D009103 1.4e-24 117.1 165 66.7
TWI60G0438 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 1.4e-24 117.1 167 70.1
Sopen03g034090 Solanum pennellii HOM05D007161 ORTHO05D009103 2.3e-24 116.3 165 67.3
ATR0177G008 Amborella trichopoda HOM05D007161 ORTHO05D009103 3.1e-24 115.9 166 67.5
QL10p019814 Quercus lobata HOM05D007161 ORTHO05D009103 4.0e-24 115.5 170 67.6
CAN.G1228.16 Capsicum annuum HOM05D007161 ORTHO05D009103 5.2e-24 115.2 167 67.1
Cfa019345 Carpinus fangiana HOM05D007161 ORTHO05D009103 5.2e-24 115.2 176 67.6
Ciclev10022373m.g Citrus clementina HOM05D007161 ORTHO05D009103 5.2e-24 115.2 167 66.5
MSTRG.9598 Avicennia marina HOM05D007161 ORTHO05D009103 6.8e-24 114.8 172 66.3
Cc00_g12110 Coffea canephora HOM05D007161 ORTHO05D009103 6.8e-24 114.8 150 74.0
CiPaw.11G054500 Carya illinoinensis HOM05D007161 ORTHO05D009103 8.9e-24 114.4 170 65.9
HanXRQChr08g0230491 Helianthus annuus HOM05D007161 ORTHO05D009103 2.0e-23 113.2 163 69.3
PGR083G0667 Punica granatum HOM05D007161 ORTHO05D009103 2.0e-23 113.2 171 65.5
Solyc03g115020.3 Solanum lycopersicum HOM05D007161 ORTHO05D009103 2.0e-23 113.2 165 67.9
Prupe.5G206100 Prunus persica HOM05D007161 ORTHO05D009103 3.4e-23 112.5 166 71.1
Sabra15G0084100 Salix brachista HOM05D007161 ORTHO05D009103 3.4e-23 112.5 161 72.0
Nitab4.5_0007356g0010 Nicotiana tabacum HOM05D007161 ORTHO05D009103 5.8e-23 111.7 117 86.3
Hund02576 Selenicereus undatus HOM05D007161 ORTHO05D009103 7.5e-23 111.3 164 66.5
TWI81G0640 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 7.5e-23 111.3 166 69.3
PGSC0003DMG400024633 Solanum tuberosum HOM05D007161 ORTHO05D009103 9.8e-23 110.9 165 66.1
FAN13G1189 Fragaria x ananassa HOM05D007161 ORTHO05D009103 1.7e-22 110.2 128 79.7
MSTRG.4482 Avicennia marina HOM05D007161 ORTHO05D009103 2.2e-22 109.8 171 63.7
Oeu017188.1 Olea europaea HOM05D007161 ORTHO05D009103 2.9e-22 109.4 125 74.4
Sed0004238 Sechium edule HOM05D007161 ORTHO05D009103 2.9e-22 109.4 177 65.0
CDE05G0262 Ceratophyllum demersum HOM05D007161 ORTHO05D009103 3.7e-22 109.0 160 68.1
FvH4_5g13740 Fragaria vesca HOM05D007161 ORTHO05D009103 3.7e-22 109.0 148 71.6
FAN18G1870 Fragaria x ananassa HOM05D007161 ORTHO05D009103 3.7e-22 109.0 148 72.3
RcHm_v2.0_Chr7g0183201 Rosa chinensis HOM05D007161 ORTHO05D009103 3.7e-22 109.0 150 70.7
DCAR_011565 Daucus carota HOM05D007161 ORTHO05D009103 4.9e-22 108.6 162 69.8
Potri.015G058600 Populus trichocarpa HOM05D007161 ORTHO05D009103 6.4e-22 108.2 160 70.6
GSVIVG01008106001 Vitis vinifera HOM05D007161 ORTHO05D009103 6.4e-22 108.2 160 67.5
ECA246G0920 Erigeron canadensis HOM05D007161 ORTHO05D009103 1.1e-21 107.5 166 68.7
Sc11g0004490 Simmondsia chinensis HOM05D007161 ORTHO05D009103 1.1e-21 107.5 176 63.1
SalBow7G4182 Salvia bowleyana HOM05D007161 ORTHO05D009103 1.9e-21 106.7 161 67.7
Lj5C102G4 Lonicera japonica HOM05D007161 ORTHO05D009103 2.4e-21 106.3 163 67.5
Nn4g23440 Nelumbo nucifera HOM05D007161 ORTHO05D009103 2.4e-21 106.3 162 69.8
BcaB01g05681 Brassica carinata HOM05D007161 ORTHO05D009103 4.1e-21 105.5 162 66.0
FAN08G2338 Fragaria x ananassa HOM05D007161 ORTHO05D009103 4.1e-21 105.5 146 71.2
TAR629G0203 Trochodendron aralioides HOM05D007161 ORTHO05D009103 4.1e-21 105.5 170 65.3
Aqoxy3G03679 Aquilegia oxysepala HOM05D007161 ORTHO05D009103 5.4e-21 105.1 190 60.5
CANSAT56G0131 Cannabis sativa HOM05D007161 ORTHO05D009103 5.4e-21 105.1 168 66.1
Carub.0006s0694 Capsella rubella HOM05D007161 ORTHO05D009103 7.1e-21 104.8 88 83.0
Eucgr.B00604 Eucalyptus grandis HOM05D007161 ORTHO05D009103 9.2e-21 104.4 174 64.4
A03p03560 Brassica napus HOM05D007161 ORTHO05D009103 1.2e-20 104.0 162 65.4
BraA03t09706Z Brassica rapa HOM05D007161 ORTHO05D009103 1.2e-20 104.0 162 65.4
AL6G18400 Arabidopsis lyrata HOM05D007161 ORTHO05D009103 1.6e-20 103.6 88 81.8
ClCG04G011740 Citrullus lanatus HOM05D007161 ORTHO05D009103 1.6e-20 103.6 176 65.9
CsaV3_1G006050 Cucumis sativus L. HOM05D007161 ORTHO05D009103 1.6e-20 103.6 192 62.5
SGA_v2.0_scaffold42G16039 Striga asiatica HOM05D007161 ORTHO05D009103 1.6e-20 103.6 141 71.6
C03p04010 Brassica napus HOM05D007161 ORTHO05D009103 2.1e-20 103.2 162 65.4
MELO3C002036.2 Cucumis melo HOM05D007161 ORTHO05D009103 2.7e-20 102.8 192 62.5
BcaB01g05640 Brassica carinata HOM05D007161 ORTHO05D009103 3.5e-20 102.4 162 65.4
BolC3t12938H Brassica oleracea HOM05D007161 ORTHO05D009103 6.0e-20 101.7 162 66.7
MD06G1225900 Malus domestica HOM05D007161 ORTHO05D009103 7.8e-20 101.3 169 67.5
Ah.02g114100 Amaranthus hybridus HOM05D007161 ORTHO05D009103 1.0e-19 100.9 161 64.0
Lj1g0027416 Lotus japonicus HOM05D007161 ORTHO05D009103 1.0e-19 100.9 169 66.3
CARHR205130 Cardamine hirsuta HOM05D007161 ORTHO05D009103 1.7e-19 100.1 88 79.5
AT5G08050 Arabidopsis thaliana HOM05D007161 ORTHO05D009103 2.3e-19 99.8 88 80.7
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 2.3e-19 99.8 152 67.1
Oeu044879.1 Olea europaea HOM05D007161 ORTHO05D009103 2.3e-19 99.8 88 80.7
Thhalv10014904m.g Eutrema salsugineum HOM05D007161 ORTHO05D009103 3.0e-19 99.4 65 76.9
MD14G1212800 Malus domestica HOM05D007161 ORTHO05D009103 3.0e-19 99.4 167 66.5
Aa31LG3G18490 Aethionema arabicum HOM05D007161 ORTHO05D009103 6.6e-19 98.2 162 62.3
Duzib084G1357 Durio zibethinus HOM05D007161 ORTHO05D009103 6.6e-19 98.2 117 80.3
Gohir.A07G068000 Gossypium hirsutum HOM05D007161 ORTHO05D009103 1.1e-18 97.4 175 64.6
Phvul.009G202100 Phaseolus vulgaris HOM05D007161 ORTHO05D009103 1.1e-18 97.4 163 64.4
AUR62021546 Chenopodium quinoa HOM05D007161 ORTHO05D009103 2.5e-18 96.3 116 80.2
Gohir.D07G072600 Gossypium hirsutum HOM05D007161 ORTHO05D009103 2.5e-18 96.3 175 64.6
HanXRQChr17g0550221 Helianthus annuus HOM05D007161 ORTHO05D009103 2.5e-18 96.3 67 74.6
Sp6g34900 Schrenkiella parvula HOM05D007161 ORTHO05D009103 2.5e-18 96.3 162 62.3
arahy.Tifrunner.gnm1.ann1.N0KAAL Arachis hypogaea HOM05D007161 ORTHO05D009103 4.3e-18 95.5 164 62.2
Ca_14363_v3 Cicer arietinum L. HOM05D007161 ORTHO05D009103 4.3e-18 95.5 158 66.5
Glyma.04G161600 Glycine max HOM05D007161 ORTHO05D009103 4.3e-18 95.5 163 63.8
Gorai.001G076800 Gossypium raimondii HOM05D007161 ORTHO05D009103 4.3e-18 95.5 175 64.6
Psat5g207080 Pisum sativum HOM05D007161 ORTHO05D009103 4.3e-18 95.5 170 67.1
TPR.G12153 Trifolium pratense HOM05D007161 ORTHO05D009103 4.3e-18 95.5 168 63.7
AUR62008547 Chenopodium quinoa HOM05D007161 ORTHO05D009103 5.6e-18 95.1 159 65.4
Lalb_Chr12g0199331 Lupinus albus HOM05D007161 ORTHO05D009103 7.3e-18 94.7 127 78.0
arahy.Tifrunner.gnm1.ann1.KM320G Arachis hypogaea HOM05D007161 ORTHO05D009103 1.2e-17 94.0 164 61.6
EL10Ac5g11145 Beta vulgaris HOM05D007161 ORTHO05D009103 1.2e-17 94.0 175 62.3
SEGI_08112 Sequoiadendron giganteum HOM05D007161 ORTHO05D009103 2.8e-17 92.8 158 62.0
Glyma.06G204200 Glycine max HOM05D007161 ORTHO05D009103 6.2e-17 91.7 163 63.2
Thecc.03G103000 Theobroma cacao HOM05D007161 ORTHO05D009103 6.2e-17 91.7 173 61.3
COL.COLO4_24339 Corchorus olitorius HOM05D007161 ORTHO05D009103 1.1e-16 90.9 161 64.6
Migut.D01637 Erythranthe guttata HOM05D007161 ORTHO05D009103 1.1e-16 90.9 164 64.6
Medtr3g026020 Medicago truncatula HOM05D007161 ORTHO05D009103 1.1e-16 90.9 170 63.5
Os12g0575000 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 3.4e-15 85.9 165 57.6
Mapoly0107s0029 Marchantia polymorpha HOM05D007161 ORTHO05D009103 2.9e-14 82.8 148 64.9
AagrBONN_evm.TU.Sc2ySwM_344.2890 Anthoceros agrestis HOM05D007161 ORTHO05D009103 1.4e-13 80.5 118 72.9
Peaxi162Scf00009g00010 Petunia axillaris HOM05D007161 ORTHO05D009103 1.6e-12 77.0 77 54.5
SMO139G0085 Selaginella moellendorffii HOM05D007161 ORTHO05D009103 7.8e-12 74.7 119 66.4
Zm00001eb029520 Zea mays HOM05D007161 ORTHO05D009103 1.7e-11 73.6 167 55.7
Os11g0460900 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 1.5e-10 70.5 123 36.6
Pp3c1_19210 Physcomitrium patens HOM05D007161 ORTHO05D009103 1.9e-10 70.1 65 56.9
Actinidia04818 Actinidia chinensis HOM05D007161 ORTHO05D009103 6.4e-06 55.1 125 61.6


User provided reference genes

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