Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G2811 Papaver somniferum HOM05D004329 ORTHO05D005516 0.0e+00 1163.7 597 100.0
PSO017G7154 Papaver somniferum HOM05D004329 ORTHO05D005516 0.0e+00 1152.9 597 98.7
PSO081G0143 Papaver somniferum HOM05D004329 ORTHO05D005516 4.2e-307 1057.4 597 91.8
Nn4g22142 Nelumbo nucifera HOM05D004329 ORTHO05D005516 4.0e-265 917.9 599 77.8
TAR374G0799 Trochodendron aralioides HOM05D004329 ORTHO05D005516 6.7e-265 917.1 600 78.5
Aqoxy4G00231 Aquilegia oxysepala HOM05D004329 ORTHO05D005516 3.1e-262 908.3 597 76.7
Duzib205G0720 Durio zibethinus HOM05D004329 ORTHO05D005516 1.3e-255 886.3 600 74.2
vmacro19178 Vaccinium macrocarpon HOM05D004329 ORTHO05D005516 1.8e-254 882.5 601 73.5
Sc22g0003470 Simmondsia chinensis HOM05D004329 ORTHO05D005516 2.4e-254 882.1 600 73.8
Atru.chr6.1908 Acer truncatum HOM05D004329 ORTHO05D005516 3.1e-254 881.7 600 74.3
Cfa018712 Carpinus fangiana HOM05D004329 ORTHO05D005516 3.1e-254 881.7 600 74.8
Thecc.03G139600 Theobroma cacao HOM05D004329 ORTHO05D005516 4.5e-253 877.9 600 73.5
Gohir.D07G051400 Gossypium hirsutum HOM05D004329 ORTHO05D005516 7.7e-253 877.1 602 73.4
Haze_07104 Corylus avellana HOM05D004329 ORTHO05D005516 1.7e-252 875.9 624 72.8
Rhsim08G0196600 Rhododendron simsii HOM05D004329 ORTHO05D005516 2.2e-252 875.5 601 73.5
QL10p000650 Quercus lobata HOM05D004329 ORTHO05D005516 2.9e-252 875.2 589 75.9
MD14G1148000 Malus domestica HOM05D004329 ORTHO05D005516 1.9e-251 872.5 603 74.1
TWI39G0623 Tripterygium wilfordii HOM05D004329 ORTHO05D005516 1.9e-251 872.5 600 73.5
Prupe.5G142700 Prunus persica HOM05D004329 ORTHO05D005516 4.2e-251 871.3 603 73.6
CANSAT80G0883 Cannabis sativa HOM05D004329 ORTHO05D005516 5.5e-251 870.9 591 74.3
Dinv23217 Davidia involucrata HOM05D004329 ORTHO05D005516 5.5e-251 870.9 603 73.1
CSS0022050 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 9.5e-251 870.2 601 73.2
Gorai.001G054500 Gossypium raimondii HOM05D004329 ORTHO05D005516 2.1e-250 869.0 616 71.8
CANSAT80G0741 Cannabis sativa HOM05D004329 ORTHO05D005516 2.8e-250 868.6 592 74.3
Gohir.A07G047200 Gossypium hirsutum HOM05D004329 ORTHO05D005516 1.4e-249 866.3 608 72.0
Hma1.2p1_0493F.1_g164990 Hydrangea macrophylla HOM05D004329 ORTHO05D005516 1.4e-249 866.3 599 73.1
Potri.015G105600 Populus trichocarpa HOM05D004329 ORTHO05D005516 1.8e-249 865.9 600 73.0
Sopen03g024820 Solanum pennellii HOM05D004329 ORTHO05D005516 2.3e-249 865.5 603 73.3
Actinidia18306 Actinidia chinensis HOM05D004329 ORTHO05D005516 5.2e-249 864.4 601 72.5
Ciclev10031005m.g Citrus clementina HOM05D004329 ORTHO05D005516 2.6e-248 862.1 600 72.7
CAN.G1210.1 Capsicum annuum HOM05D004329 ORTHO05D005516 4.4e-248 861.3 603 73.0
Solyc03g093970.3 Solanum lycopersicum HOM05D004329 ORTHO05D005516 5.7e-248 860.9 603 73.0
vmacro06162 Vaccinium macrocarpon HOM05D004329 ORTHO05D005516 5.7e-248 860.9 601 72.2
GSVIVG01008641001 Vitis vinifera HOM05D004329 ORTHO05D005516 5.7e-248 860.9 599 73.8
Sopen02g013850 Solanum pennellii HOM05D004329 ORTHO05D005516 7.5e-248 860.5 603 73.0
Nitab4.5_0007718g0050 Nicotiana tabacum HOM05D004329 ORTHO05D005516 1.3e-247 859.8 604 72.7
Solyc02g062810.4 Solanum lycopersicum HOM05D004329 ORTHO05D005516 1.3e-247 859.8 603 73.1
ATR1096G004 Amborella trichopoda HOM05D004329 ORTHO05D005516 2.2e-247 859.0 600 72.7
Potri.012G106200 Populus trichocarpa HOM05D004329 ORTHO05D005516 1.8e-246 855.9 600 71.8
MD06G1131700 Malus domestica HOM05D004329 ORTHO05D005516 2.4e-246 855.5 594 73.6
EL10Ac7g17942 Beta vulgaris HOM05D004329 ORTHO05D005516 3.1e-246 855.1 599 73.0
RcHm_v2.0_Chr7g0188791 Rosa chinensis HOM05D004329 ORTHO05D005516 2.0e-245 852.4 601 72.7
TPR.G12807 Trifolium pratense HOM05D004329 ORTHO05D005516 3.5e-245 851.7 605 71.4
ClCG03G012650 Citrullus lanatus HOM05D004329 ORTHO05D005516 7.8e-245 850.5 593 73.2
Actinidia36840 Actinidia chinensis HOM05D004329 ORTHO05D005516 1.3e-244 849.7 601 71.2
FAN18G1836 Fragaria x ananassa HOM05D004329 ORTHO05D005516 1.7e-244 849.4 593 72.8
Medtr8g100110 Medicago truncatula HOM05D004329 ORTHO05D005516 1.7e-244 849.4 605 70.9
CsaV3_1G043340 Cucumis sativus L. HOM05D004329 ORTHO05D005516 2.3e-244 849.0 593 72.8
Peaxi162Scf00935g00018 Petunia axillaris HOM05D004329 ORTHO05D005516 2.9e-244 848.6 602 72.8
Eucgr.F03808 Eucalyptus grandis HOM05D004329 ORTHO05D005516 3.8e-244 848.2 598 72.1
MELO3C015126.2 Cucumis melo HOM05D004329 ORTHO05D005516 8.6e-244 847.0 593 72.8
FvH4_5g09400 Fragaria vesca HOM05D004329 ORTHO05D005516 1.1e-243 846.7 593 72.7
Psat7g039240 Pisum sativum HOM05D004329 ORTHO05D005516 3.3e-243 845.1 605 70.6
Ca_16811_v3 Cicer arietinum L. HOM05D004329 ORTHO05D005516 5.6e-243 844.3 605 70.9
SGA_v2.0_scaffold74G24730 Striga asiatica HOM05D004329 ORTHO05D005516 9.5e-243 843.6 620 70.6
Migut.I00617 Erythranthe guttata HOM05D004329 ORTHO05D005516 1.6e-242 842.8 601 71.9
Thhalv10003854m.g Eutrema salsugineum HOM05D004329 ORTHO05D005516 2.1e-242 842.4 602 70.3
Manes.06G126200 Manihot esculenta HOM05D004329 ORTHO05D005516 3.6e-242 841.6 601 70.9
CiPaw.09G139600 Carya illinoinensis HOM05D004329 ORTHO05D005516 4.7e-242 841.3 567 74.6
FAN13G1968 Fragaria x ananassa HOM05D004329 ORTHO05D005516 6.1e-242 840.9 616 70.9
Sed0013101 Sechium edule HOM05D004329 ORTHO05D005516 8.0e-242 840.5 593 72.5
MSTRG.22850 Avicennia marina HOM05D004329 ORTHO05D005516 1.0e-241 840.1 601 71.7
Sabra15G0125900 Salix brachista HOM05D004329 ORTHO05D005516 1.0e-241 840.1 648 67.4
Sed0023904 Sechium edule HOM05D004329 ORTHO05D005516 1.8e-241 839.3 594 72.6
THA.LOC104823903 Tarenaya hassleriana HOM05D004329 ORTHO05D005516 2.3e-241 839.0 598 70.7
A06p28670 Brassica napus HOM05D004329 ORTHO05D005516 3.0e-241 838.6 600 69.8
BraA06t25807Z Brassica rapa HOM05D004329 ORTHO05D005516 6.8e-241 837.4 600 69.7
Lj4g0026438 Lotus japonicus HOM05D004329 ORTHO05D005516 1.2e-240 836.6 605 70.2
BcaB02g09609 Brassica carinata HOM05D004329 ORTHO05D005516 1.5e-240 836.3 600 70.0
Lsat_1_v5_gn_4_84600 Lactuca sativa HOM05D004329 ORTHO05D005516 2.0e-240 835.9 604 70.5
BcaC01g02451 Brassica carinata HOM05D004329 ORTHO05D005516 4.4e-240 834.7 600 69.3
C03p65130 Brassica napus HOM05D004329 ORTHO05D005516 4.4e-240 834.7 600 69.3
BolC3t18767H Brassica oleracea HOM05D004329 ORTHO05D005516 4.4e-240 834.7 600 69.3
Lj5A87T69 Lonicera japonica HOM05D004329 ORTHO05D005516 4.4e-240 834.7 595 71.3
Aa31LG11G1550 Aethionema arabicum HOM05D004329 ORTHO05D005516 1.3e-239 833.2 600 70.0
Lalb_Chr07g0183781 Lupinus albus HOM05D004329 ORTHO05D005516 1.3e-239 833.2 596 71.5
PGR083G0006 Punica granatum HOM05D004329 ORTHO05D005516 4.9e-239 831.2 591 70.7
THA.LOC104819422 Tarenaya hassleriana HOM05D004329 ORTHO05D005516 4.9e-239 831.2 598 70.1
Sp2g25150 Schrenkiella parvula HOM05D004329 ORTHO05D005516 8.3e-239 830.5 600 70.0
BraA02t09122Z Brassica rapa HOM05D004329 ORTHO05D005516 1.4e-238 829.7 598 70.1
VMungo0251G1423 Vigna mungo HOM05D004329 ORTHO05D005516 4.1e-238 828.2 605 70.1
BolC2t12235H Brassica oleracea HOM05D004329 ORTHO05D005516 9.2e-238 827.0 597 69.5
AL8G38730 Arabidopsis lyrata HOM05D004329 ORTHO05D005516 7.8e-237 823.9 602 68.8
COL.COLO4_37247 Corchorus olitorius HOM05D004329 ORTHO05D005516 7.8e-237 823.9 620 68.7
Carub.0008s2266 Capsella rubella HOM05D004329 ORTHO05D005516 1.0e-236 823.5 600 69.5
ECA232G2772 Erigeron canadensis HOM05D004329 ORTHO05D005516 1.0e-236 823.5 591 70.2
Glyma.05G200600 Glycine max HOM05D004329 ORTHO05D005516 1.0e-236 823.5 605 70.1
Phvul.002G282000 Phaseolus vulgaris HOM05D004329 ORTHO05D005516 3.0e-236 822.0 605 69.1
Oeu012844.2 Olea europaea HOM05D004329 ORTHO05D005516 1.9e-235 819.3 657 65.1
arahy.Tifrunner.gnm1.ann1.IBL9WM Arachis hypogaea HOM05D004329 ORTHO05D005516 2.1e-234 815.8 597 70.4
arahy.Tifrunner.gnm1.ann1.HJ5J7F Arachis hypogaea HOM05D004329 ORTHO05D005516 1.4e-233 813.1 596 70.1
HanXRQChr09g0273891 Helianthus annuus HOM05D004329 ORTHO05D005516 1.4e-233 813.1 595 69.4
Carub.0005s0295 Capsella rubella HOM05D004329 ORTHO05D005516 5.2e-233 811.2 599 68.3
Dinv13728 Davidia involucrata HOM05D004329 ORTHO05D005516 5.2e-233 811.2 570 73.0
DCAR_016350 Daucus carota HOM05D004329 ORTHO05D005516 1.5e-232 809.7 601 68.9
AT5G61970 Arabidopsis thaliana HOM05D004329 ORTHO05D005516 4.4e-232 808.1 590 68.8
FAN04G0329 Fragaria x ananassa HOM05D004329 ORTHO05D005516 4.1e-230 801.6 601 70.2
Hund02504 Selenicereus undatus HOM05D004329 ORTHO05D005516 6.0e-229 797.7 548 73.7
Sabra12G0078600 Salix brachista HOM05D004329 ORTHO05D005516 7.8e-229 797.3 681 62.4
BcaB07g29807 Brassica carinata HOM05D004329 ORTHO05D005516 3.9e-228 795.0 621 65.9
Actinidia08906 Actinidia chinensis HOM05D000877 ORTHO05D001509 6.6e-228 794.3 551 72.2
FAN08G1859 Fragaria x ananassa HOM05D004329 ORTHO05D005516 1.8e-225 786.2 564 72.0
Glyma.08G008000 Glycine max HOM05D004329 ORTHO05D005516 5.4e-222 774.6 563 70.9
AUR62009528 Chenopodium quinoa HOM05D004329 ORTHO05D005516 9.2e-222 773.9 591 69.0
AUR62041693 Chenopodium quinoa HOM05D004329 ORTHO05D005516 1.2e-221 773.5 591 68.4
Cpa.g.sc13.162 Carica papaya HOM05D004329 ORTHO05D005516 1.7e-220 769.6 597 67.5
MBI13_g15007_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 8.9e-217 757.3 502 76.1
SGA_v2.0_scaffold40G15626 Striga asiatica HOM05D004329 ORTHO05D005516 2.6e-216 755.7 613 65.4
SalBow1G7365 Salvia bowleyana HOM05D004329 ORTHO05D005516 6.6e-212 741.1 641 61.8
Zm00001eb327290 Zea mays HOM05D004329 ORTHO05D005516 1.1e-211 740.3 597 63.8
unitig_32.g11043 Utricularia gibba HOM05D004329 ORTHO05D005516 1.4e-209 733.4 655 58.5
SEGI_15405 Sequoiadendron giganteum HOM05D004329 ORTHO05D005516 3.1e-209 732.3 598 63.2
CDE04G3457 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 4.0e-209 731.9 603 64.8
PGSC0003DMG400015501 Solanum tuberosum HOM05D004329 ORTHO05D005516 5.6e-203 711.4 496 72.8
Manes.14G045200 Manihot esculenta HOM05D004329 ORTHO05D005516 2.6e-200 702.6 477 74.2
CARHR275760 Cardamine hirsuta HOM05D004329 ORTHO05D005516 3.9e-196 688.7 476 72.7
AUR62044173 Chenopodium quinoa HOM05D004329 ORTHO05D005516 5.5e-182 641.7 549 63.0
MBI13_g43178_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 6.7e-180 634.8 502 66.5
C02p61780 Brassica napus HOM05D004329 ORTHO05D005516 1.7e-175 620.2 425 72.9
Pp3c15_22190 Physcomitrium patens HOM05D004329 ORTHO05D005516 4.1e-169 599.0 579 54.2
AagrBONN_evm.TU.Sc2ySwM_228.1186 Anthoceros agrestis HOM05D004329 ORTHO05D005516 1.0e-167 594.3 604 52.6
Cc09_g07950 Coffea canephora HOM05D004329 ORTHO05D005516 5.5e-166 588.6 440 68.2
Mapoly0153s0017 Marchantia polymorpha HOM05D004329 ORTHO05D005516 8.8e-164 581.3 588 52.0
Os08g0323000 Oryza sativa ssp. japonica HOM05D004329 ORTHO05D005516 3.1e-153 546.2 439 64.0
CBR_g20988 Chara braunii HOM05D004329 ORTHO05D005516 9.8e-139 498.0 610 47.0
Ah.11g046840 Amaranthus hybridus HOM05D004329 ORTHO05D005516 1.4e-137 494.2 333 75.4
A02p41850 Brassica napus HOM05D004329 ORTHO05D005516 4.7e-133 479.2 366 68.3
SMO356G0738 Selaginella moellendorffii HOM05D004329 ORTHO05D005516 2.3e-132 476.9 576 46.7
HPP92_028710 Vanilla planifolia HOM05D004329 ORTHO05D005516 3.1e-129 466.5 417 60.7
Nitab4.5_0017885g0010 Nicotiana tabacum HOM05D004329 ORTHO05D005516 1.6e-117 427.6 316 69.9
Nitab4.5_0009429g0030 Nicotiana tabacum HOM05D004329 ORTHO05D005516 1.4e-116 424.5 288 74.7
FAN18G2676 Fragaria x ananassa HOM05D004329 ORTHO05D005516 1.6e-112 411.0 527 47.4
CDE07G0688 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 7.5e-107 392.1 248 76.6
Cc00_g30130 Coffea canephora HOM05D004329 ORTHO05D005516 6.2e-101 372.5 274 70.1
Aqoxy5G01090 Aquilegia oxysepala HOM05D004329 ORTHO05D005516 6.8e-100 369.0 435 48.3
TAR622G0210 Trochodendron aralioides HOM05D004329 ORTHO05D005516 1.1e-94 351.7 316 62.3
CDE07G1247 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 1.3e-85 321.6 353 54.4
MBI13_g13130_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 5.5e-73 279.6 181 80.1
Cre06.g267100 Chlamydomonas reinhardtii HOM05D004329 ORTHO05D005516 6.0e-72 276.2 676 31.5
MCO15G338 Micromonas commoda HOM05D004329 ORTHO05D005516 2.2e-66 257.7 557 30.5
Cc09_g07990 Coffea canephora HOM05D004329 ORTHO05D005516 1.7e-58 231.5 152 77.0
BcaC03g18112 Brassica carinata HOM05D004329 ORTHO05D005516 3.8e-58 230.3 153 74.5
Cc09_g07980 Coffea canephora HOM05D004329 ORTHO05D005516 4.2e-57 226.9 152 76.3
PRCOL_00003443 Prasinoderma coloniale HOM05D004329 ORTHO05D005516 2.5e-41 174.5 609 27.8
CSS0034501 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 1.0e-39 169.1 148 60.1
CSS0009974 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 8.8e-39 166.0 125 65.6
Solyc02g062830.2 Solanum lycopersicum HOM05D004329 ORTHO05D005516 5.2e-31 140.2 96 71.9
AagrBONN_evm.TU.Sc2ySwM_228.1280 Anthoceros agrestis HOM05D004329 ORTHO05D005516 8.3e-29 132.9 186 43.5
AagrBONN_evm.TU.Sc2ySwM_228.1281 Anthoceros agrestis HOM05D004329 ORTHO05D005516 1.8e-28 131.7 116 55.2
C02p61790 Brassica napus HOM05D004329 ORTHO05D005516 1.6e-27 128.6 97 64.9
CARHR275770 Cardamine hirsuta HOM05D004329 ORTHO05D005516 5.5e-25 120.2 97 56.7
Haze_22596 Corylus avellana HOM05D004329 ORTHO05D010424 1.4e-20 105.5 71 70.4
Solyc02g062840.1 Solanum lycopersicum HOM05D004329 ORTHO05D005516 1.8e-20 105.1 66 75.8
Cfa027290 Carpinus fangiana HOM05D004329 ORTHO05D121551 1.2e-19 102.4 629 22.9
CAN.G865.5 Capsicum annuum HOM05D004329 ORTHO05D005516 7.7e-19 99.8 69 63.8
Lsat_1_v5_gn_5_81961 Lactuca sativa HOM05D004329 ORTHO05D005516 3.6e-16 90.9 49 85.7
Lsat_1_v5_gn_8_114301 Lactuca sativa HOM05D004329 ORTHO05D005516 1.8e-15 88.6 48 85.4
Lsat_1_v5_gn_2_122301 Lactuca sativa HOM05D009063 ORTHO05D011082 2.3e-15 88.2 197 31.0
Zm00001eb081410 Zea mays HOM05D004902 ORTHO05D006603 1.5e-14 85.5 79 48.1
Hund31053 Selenicereus undatus HOM05D004329 ORTHO05D026010 9.2e-12 76.3 51 78.4
Hund31064 Selenicereus undatus HOM05D004329 ORTHO05D026010 2.7e-11 74.7 51 76.5
CSS0048280 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 1.3e-10 72.4 100 46.0
Zm00001eb202340 Zea mays HOM05D004329 ORTHO05D005516 1.3e-10 72.4 72 44.4
Sopen02g013860 Solanum pennellii HOM05D004329 ORTHO05D026010 1.1e-09 69.3 61 62.3
Solyc04g048930.1 Solanum lycopersicum HOM05D004329 ORTHO05D026010 2.3e-07 61.6 54 59.3
Os08g0323266 Oryza sativa ssp. japonica HOM05D004329 ORTHO05D026010 5.8e-06 57.0 41 63.4


User provided reference genes

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