Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G2458 Papaver somniferum HOM05D003766 ORTHO05D004607 1.8e-306 1055.4 694 100.0
PSO017G5688 Papaver somniferum HOM05D003766 ORTHO05D004607 4.4e-300 1034.2 694 97.0
TWI81G0458 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 3.8e-211 738.8 697 74.2
CSS0048248 Camellia sinensis var. sinensis HOM05D003766 ORTHO05D004607 3.2e-210 735.7 682 74.2
TWI60G0360 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 3.2e-210 735.7 692 73.1
Nn3g18290 Nelumbo nucifera HOM05D003766 ORTHO05D004607 5.5e-210 734.9 687 74.8
Manes.06G005800 Manihot esculenta HOM05D003766 ORTHO05D004607 6.1e-209 731.5 676 76.6
DCAR_029422 Daucus carota HOM05D003766 ORTHO05D004607 2.3e-208 729.6 693 72.9
Dinv04134 Davidia involucrata HOM05D003766 ORTHO05D004607 4.0e-208 728.8 627 80.7
Aqoxy3G00054 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 8.8e-208 727.6 701 67.6
Aqoxy3G02431 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 1.2e-207 727.2 697 71.0
MBI19_g04409_MAGBIO Magnolia biondii HOM05D003766 ORTHO05D004607 1.3e-206 723.8 665 72.3
Actinidia09075 Actinidia chinensis HOM05D003766 ORTHO05D004607 1.6e-204 716.8 675 73.5
Cpa.g.sc3.393 Carica papaya HOM05D003766 ORTHO05D004607 8.5e-203 711.1 681 71.4
Prupe.5G234000 Prunus persica HOM05D003766 ORTHO05D004607 8.5e-203 711.1 683 73.9
Lalb_Chr09g0330351 Lupinus albus HOM05D003766 ORTHO05D004607 3.2e-202 709.1 696 72.8
Duzib068G0750 Durio zibethinus HOM05D003766 ORTHO05D004607 3.6e-201 705.7 688 71.8
MD14G1236800 Malus domestica HOM05D003766 ORTHO05D004607 3.0e-200 702.6 677 73.9
Rhsim08G0126600 Rhododendron simsii HOM05D003766 ORTHO05D004607 4.0e-200 702.2 715 65.9
FAN13G1632 Fragaria x ananassa HOM05D003766 ORTHO05D004607 5.2e-200 701.8 694 68.3
FAN18G4514 Fragaria x ananassa HOM05D003766 ORTHO05D004607 5.2e-200 701.8 694 72.3
SalBow7G0490 Salvia bowleyana HOM05D003766 ORTHO05D004607 8.8e-200 701.0 678 72.0
Thecc.03G055500 Theobroma cacao HOM05D003766 ORTHO05D004607 1.2e-199 700.7 694 71.3
Ciclev10007659m.g Citrus clementina HOM05D003766 ORTHO05D004607 1.5e-199 700.3 680 70.6
FvH4_5g17420 Fragaria vesca HOM05D003766 ORTHO05D004607 1.5e-199 700.3 694 72.3
CAN.G843.53 Capsicum annuum HOM05D003766 ORTHO05D004607 3.4e-199 699.1 690 72.0
FAN08G2416 Fragaria x ananassa HOM05D003766 ORTHO05D004607 4.4e-199 698.7 694 66.1
SGA_v2.0_scaffold102G29891 Striga asiatica HOM05D003766 ORTHO05D004607 2.2e-198 696.4 664 72.3
FAN04G2446 Fragaria x ananassa HOM05D003766 ORTHO05D004607 2.8e-198 696.0 694 72.0
Migut.I00296 Erythranthe guttata HOM05D003766 ORTHO05D004607 6.3e-198 694.9 681 70.8
Sc10g0009160 Simmondsia chinensis HOM05D003766 ORTHO05D004607 1.1e-197 694.1 682 73.8
Eucgr.B00997 Eucalyptus grandis HOM05D003766 ORTHO05D004607 2.7e-196 689.5 683 69.5
RcHm_v2.0_Chr7g0178271 Rosa chinensis HOM05D003766 ORTHO05D004607 2.7e-196 689.5 681 63.3
ECA232G0010 Erigeron canadensis HOM05D003766 ORTHO05D004607 3.5e-196 689.1 661 74.3
Solyc03g118670.3 Solanum lycopersicum HOM05D003766 ORTHO05D004607 3.5e-196 689.1 690 74.1
Potri.015G038100 Populus trichocarpa HOM05D003766 ORTHO05D004607 4.5e-196 688.7 676 73.2
Sopen03g037630 Solanum pennellii HOM05D003766 ORTHO05D004607 7.7e-196 688.0 690 73.8
Lj4g0008657 Lotus japonicus HOM05D003766 ORTHO05D004607 5.0e-195 685.3 688 69.9
Potri.012G046300 Populus trichocarpa HOM05D003766 ORTHO05D004607 5.0e-195 685.3 669 74.3
TPR.G1449 Trifolium pratense HOM05D003766 ORTHO05D004607 5.0e-195 685.3 708 66.7
Gohir.D11G002500 Gossypium hirsutum HOM05D003766 ORTHO05D004607 8.6e-195 684.5 647 77.1
TAR622G0358 Trochodendron aralioides HOM05D003766 ORTHO05D004607 8.6e-195 684.5 676 64.9
Hund06721 Selenicereus undatus HOM05D003766 ORTHO05D004607 1.9e-194 683.3 667 75.4
Sp1g16220 Schrenkiella parvula HOM05D003766 ORTHO05D004607 9.5e-194 681.0 675 69.5
Lj9A419T35 Lonicera japonica HOM05D003766 ORTHO05D004607 1.6e-193 680.2 679 74.1
Gohir.A11G002900 Gossypium hirsutum HOM05D003766 ORTHO05D004607 2.1e-193 679.9 647 77.0
Psat4g000160 Pisum sativum HOM05D003766 ORTHO05D004607 2.1e-193 679.9 696 68.8
Gorai.007G003500 Gossypium raimondii HOM05D003766 ORTHO05D004607 6.1e-193 678.3 665 75.0
Lj5C158T14 Lonicera japonica HOM05D003766 ORTHO05D004607 6.1e-193 678.3 694 68.9
Medtr8g107400 Medicago truncatula HOM05D003766 ORTHO05D004607 1.0e-192 677.6 690 71.0
unitig_750.g28512 Utricularia gibba HOM05D003766 ORTHO05D004607 3.0e-192 676.0 680 67.6
QL10p029803 Quercus lobata HOM05D003766 ORTHO05D004607 6.8e-192 674.9 693 73.3
Ca_17184_v3 Cicer arietinum L. HOM05D003766 ORTHO05D004607 4.4e-191 672.2 677 71.2
THA.LOC104813927 Tarenaya hassleriana HOM05D003766 ORTHO05D004607 4.4e-191 672.2 678 69.0
AL1G30630 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 7.5e-191 671.4 666 69.1
AT1G18260 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 2.2e-190 669.8 666 69.2
A06p14270 Brassica napus HOM05D003766 ORTHO05D004607 2.8e-190 669.5 674 69.1
BraA06t24556Z Brassica rapa HOM05D003766 ORTHO05D004607 2.8e-190 669.5 674 69.1
arahy.Tifrunner.gnm1.ann1.679W5T Arachis hypogaea HOM05D003766 ORTHO05D004607 3.7e-190 669.1 680 71.9
Thhalv10006987m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 4.9e-190 668.7 671 69.0
BolC5t30350H Brassica oleracea HOM05D003766 ORTHO05D004607 6.3e-190 668.3 671 69.0
C05p16530 Brassica napus HOM05D003766 ORTHO05D004607 8.3e-190 667.9 671 68.9
PGR044G0562 Punica granatum HOM05D003766 ORTHO05D004607 8.3e-190 667.9 685 72.4
BcaC05g25719 Brassica carinata HOM05D003766 ORTHO05D004607 1.1e-189 667.5 671 68.9
BcaB07g31816 Brassica carinata HOM05D003766 ORTHO05D004607 1.4e-189 667.2 671 68.9
Cfa019652 Carpinus fangiana HOM05D003766 ORTHO05D004607 1.4e-189 667.2 689 66.0
Atru.chr9.1710 Acer truncatum HOM05D003766 ORTHO05D004607 3.1e-189 666.0 676 70.6
Lsat_1_v5_gn_0_34021 Lactuca sativa HOM05D003766 ORTHO05D004607 4.1e-189 665.6 657 73.5
EL10Ac8g19505 Beta vulgaris HOM05D003766 ORTHO05D004607 9.2e-189 664.5 684 70.0
Aa31LG7G2830 Aethionema arabicum HOM05D003766 ORTHO05D004607 2.7e-188 662.9 662 69.0
CARHR018810 Cardamine hirsuta HOM05D003766 ORTHO05D004607 3.5e-188 662.5 672 68.5
Aa31LG4G3770 Aethionema arabicum HOM05D003766 ORTHO05D004607 4.5e-188 662.1 686 67.6
Carub.0001s1787 Capsella rubella HOM05D003766 ORTHO05D004607 4.5e-188 662.1 672 68.6
MSTRG.11305 Avicennia marina HOM05D003766 ORTHO05D004607 5.9e-188 661.8 675 69.5
Haze_18860 Corylus avellana HOM05D003766 ORTHO05D004607 1.3e-187 660.6 689 65.7
Cc04_g06210 Coffea canephora HOM05D003766 ORTHO05D004607 2.9e-187 659.4 566 78.8
Sed0009438 Sechium edule HOM05D003766 ORTHO05D004607 3.8e-187 659.1 682 68.8
Lalb_Chr05g0221621 Lupinus albus HOM05D003766 ORTHO05D004607 1.5e-186 657.1 701 66.5
Glyma.08G054900 Glycine max HOM05D003766 ORTHO05D004607 7.3e-186 654.8 670 66.1
Sabra15G0036800 Salix brachista HOM05D003766 ORTHO05D004607 9.5e-186 654.4 688 71.4
arahy.Tifrunner.gnm1.ann1.G74QKM Arachis hypogaea HOM05D003766 ORTHO05D004607 1.4e-184 650.6 706 69.0
Phvul.002G330600 Phaseolus vulgaris HOM05D003766 ORTHO05D004607 8.9e-184 647.9 664 71.7
AUR62042013 Chenopodium quinoa HOM05D003766 ORTHO05D004607 2.6e-183 646.4 675 69.3
ClCG04G010600 Citrullus lanatus HOM05D003766 ORTHO05D004607 2.6e-183 646.4 662 71.0
Oeu015089.1 Olea europaea HOM05D003766 ORTHO05D004607 3.4e-183 646.0 670 72.5
MELO3C002135.2 Cucumis melo HOM05D003766 ORTHO05D004607 7.5e-183 644.8 683 68.8
Ah.14g085990 Amaranthus hybridus HOM05D003766 ORTHO05D004607 9.8e-183 644.4 671 69.3
CsaV3_1G007190 Cucumis sativus L. HOM05D003766 ORTHO05D004607 6.4e-182 641.7 676 68.6
HanXRQChr17g0545731 Helianthus annuus HOM05D003766 ORTHO05D004607 2.4e-181 639.8 645 71.5
Glyma.05G246700 Glycine max HOM05D003766 ORTHO05D004607 3.2e-181 639.4 682 68.9
Peaxi162Scf00314g00235 Petunia axillaris HOM05D003766 ORTHO05D004607 3.2e-181 639.4 683 71.3
VMungo0251G1288 Vigna mungo HOM05D003766 ORTHO05D004607 1.6e-180 637.1 685 66.4
HanXRQChr15g0492431 Helianthus annuus HOM05D003766 ORTHO05D004607 2.0e-180 636.7 654 66.2
Thhalv10018231m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 4.6e-180 635.6 671 66.3
CDE05G3381 Ceratophyllum demersum HOM05D003766 ORTHO05D004607 7.8e-180 634.8 659 68.6
CARHR066590 Cardamine hirsuta HOM05D003766 ORTHO05D004607 1.0e-179 634.4 671 66.8
Oeu046630.1 Olea europaea HOM05D003766 ORTHO05D004607 5.0e-179 632.1 719 59.1
GSVIVG01008448001 Vitis vinifera HOM05D003766 ORTHO05D004607 4.3e-178 629.0 577 68.5
AL2G33320 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 1.6e-177 627.1 676 66.0
ATR0753G133 Amborella trichopoda HOM05D003766 ORTHO05D004607 6.2e-177 625.2 672 69.2
Sabra12G0032400 Salix brachista HOM05D003766 ORTHO05D004607 3.1e-176 622.9 703 67.1
AUR62043006 Chenopodium quinoa HOM05D003766 ORTHO05D004607 4.1e-173 612.5 569 72.9
CiPaw.16G093700 Carya illinoinensis HOM05D003766 ORTHO05D004607 4.3e-170 602.4 620 66.3
HPP92_011105 Vanilla planifolia HOM05D003766 ORTHO05D004607 6.2e-169 598.6 671 63.9
SEGI_38105 Sequoiadendron giganteum HOM05D003766 ORTHO05D004607 1.4e-168 597.4 683 66.6
Eucgr.B00877 Eucalyptus grandis HOM05D003766 ORTHO05D004607 5.4e-165 585.5 586 71.7
AT1G73570 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 3.9e-163 579.3 671 53.8
Atru.chr9.1724 Acer truncatum HOM05D003766 ORTHO05D004607 2.1e-161 573.5 608 71.2
CiPaw.15G143700 Carya illinoinensis HOM05D003766 ORTHO05D004607 1.1e-157 561.2 536 79.3
Sp5g28730 Schrenkiella parvula HOM05D003766 ORTHO05D004607 4.6e-156 555.8 670 61.6
Nitab4.5_0003401g0020 Nicotiana tabacum HOM05D003766 ORTHO05D004607 9.0e-152 541.6 674 67.2
Zm00001eb011300 Zea mays HOM05D003766 ORTHO05D004607 2.7e-148 530.0 624 60.3
MD06G1227600 Malus domestica HOM05D003766 ORTHO05D004607 3.0e-147 526.6 530 73.0
Mapoly0093s0082 Marchantia polymorpha HOM05D003766 ORTHO05D004607 5.1e-147 525.8 689 54.7
Nitab4.5_0004556g0010 Nicotiana tabacum HOM05D003766 ORTHO05D004607 5.4e-141 505.8 729 61.0
Oeu026275.1 Olea europaea HOM05D003766 ORTHO05D004607 5.3e-136 489.2 503 75.5
Manes.06G005600 Manihot esculenta HOM05D003766 ORTHO05D004607 1.2e-135 488.0 537 71.3
Pp3c19_13490 Physcomitrium patens HOM05D003766 ORTHO05D004607 4.2e-133 479.6 674 51.6
SMO228G0037 Selaginella moellendorffii HOM05D003766 ORTHO05D004607 2.3e-131 473.8 608 54.9
Sed0018638 Sechium edule HOM05D003766 ORTHO05D004607 1.1e-130 471.5 540 69.3
Pp3c22_10650 Physcomitrium patens HOM05D003766 ORTHO05D004607 1.3e-126 458.0 601 55.4
HanXRQChr14g0456281 Helianthus annuus HOM05D003766 ORTHO05D004607 6.7e-123 445.7 548 58.9
TAR629G3071 Trochodendron aralioides HOM05D003766 ORTHO05D004607 1.3e-113 414.8 263 77.6
Aqoxy3G00039 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 2.2e-110 404.1 483 68.7
Pp3c19_15130 Physcomitrium patens HOM05D003766 ORTHO05D004607 1.6e-108 397.9 511 58.3
TAR629G0485 Trochodendron aralioides HOM05D003766 ORTHO05D004607 5.1e-107 392.9 301 70.1
vmacro17777 Vaccinium macrocarpon HOM05D003766 ORTHO05D004607 1.7e-102 377.9 269 70.6
vmacro17776 Vaccinium macrocarpon HOM05D003766 ORTHO05D004607 1.4e-99 368.2 324 64.2
Carub.0002s2031 Capsella rubella HOM05D003766 ORTHO05D004607 1.1e-93 348.6 451 45.5
AagrBONN_evm.TU.Sc2ySwM_228.854 Anthoceros agrestis HOM05D003766 ORTHO05D004607 1.1e-88 332.0 477 57.9
COL.COLO4_04795 Corchorus olitorius HOM05D003766 ORTHO05D004607 1.7e-81 308.1 223 77.1
HPP92_011088 Vanilla planifolia HOM05D003766 ORTHO05D004607 1.2e-76 292.0 292 88.0
Zm00001eb398230 Zea mays HOM05D003766 ORTHO05D004607 5.7e-74 283.1 306 52.0
BcaB05g24801 Brassica carinata HOM05D003766 ORTHO05D004607 7.8e-71 272.7 240 58.8
Atru.chr9.1718 Acer truncatum HOM05D003766 ORTHO05D004607 6.8e-67 259.6 172 83.7
BcaC04g22654 Brassica carinata HOM05D003766 ORTHO05D004607 2.9e-65 254.2 188 69.1
BolC2t09163H Brassica oleracea HOM05D003766 ORTHO05D004607 1.4e-64 251.9 319 70.8
BcaC07g36877 Brassica carinata HOM05D003766 ORTHO05D004607 2.4e-64 251.1 291 50.2
Psat4g000240 Pisum sativum HOM05D003766 ORTHO05D004607 2.7e-63 247.7 282 52.1
C02p31190 Brassica napus HOM05D003766 ORTHO05D004607 5.2e-51 206.8 300 43.3
BolC7t40944H Brassica oleracea HOM05D003766 ORTHO05D004607 5.8e-50 203.4 138 73.2
HPP92_011087 Vanilla planifolia HOM05D003766 ORTHO05D004607 1.4e-48 198.7 222 50.5
QL10p029813 Quercus lobata HOM05D003766 ORTHO05D004607 1.9e-48 198.4 305 43.6
Actinidia35129 Actinidia chinensis HOM05D003766 ORTHO05D004607 2.3e-46 191.4 289 79.2
C09p56670 Brassica napus HOM05D003766 ORTHO05D004607 1.5e-42 178.7 111 80.2
Dinv12692 Davidia involucrata HOM05D003766 ORTHO05D004607 9.9e-42 176.0 90 87.8
BolC1t04841H Brassica oleracea HOM05D003766 ORTHO05D004607 2.4e-40 171.4 111 77.5
QL10p030223 Quercus lobata HOM05D003766 ORTHO05D004607 5.8e-34 150.2 167 52.1
CBR_g40334 Chara braunii HOM05D000019 ORTHO05D000002 4.2e-32 144.1 322 55.6
C02p31200 Brassica napus HOM05D003766 ORTHO05D004607 9.3e-32 142.9 131 53.4
COL.COLO4_04913 Corchorus olitorius HOM05D003766 ORTHO05D004607 4.6e-31 140.6 201 45.8
Hma1.2p1_0759F.1_g213970 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 4.2e-24 117.5 93 63.4
Hma1.2p1_2524F.1_g323905 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 9.3e-24 116.3 98 63.3
Hma1.2p1_0502F.1_g167690 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 1.6e-23 115.5 107 59.8
Hma1.2p1_0127F.1_g059480 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 7.9e-23 113.2 98 63.3
MCO08G236 Micromonas commoda HOM05D003766 ORTHO05D004607 1.0e-22 112.8 176 40.9
Cre03.g197400 Chlamydomonas reinhardtii HOM05D003766 ORTHO05D004607 3.3e-21 107.8 388 37.1
Sp5g28740 Schrenkiella parvula HOM05D000408 ORTHO05D004607 9.9e-18 96.3 158 38.0
PRCOL_00002904 Prasinoderma coloniale HOM05D003766 ORTHO05D004607 7.1e-16 90.1 212 28.8
C08p01510 Brassica napus HOM05D003766 ORTHO05D004607 1.6e-15 89.0 69 62.3
Cfa023117 Carpinus fangiana HOM05D016742 ORTHO05D028589 6.0e-15 87.0 544 29.6
CBR_g40333 Chara braunii HOM05D003766 ORTHO05D004607 8.7e-14 83.2 118 41.5
BraA05t20732Z Brassica rapa HOM05D003766 ORTHO05D004607 1.5e-13 82.4 68 57.4
BolC9t56024H Brassica oleracea HOM05D021712 ORTHO05D021656 2.5e-13 81.6 62 61.3
Hma1.2p1_0478F.1_g161250 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 5.6e-13 80.5 67 61.2
Oeu002213.1 Olea europaea HOM05D003766 ORTHO05D004607 9.6e-13 79.7 80 52.5
A05p35970 Brassica napus HOM05D003766 ORTHO05D004607 1.6e-12 79.0 71 52.1
C09p31690 Brassica napus HOM05D021712 ORTHO05D021656 3.1e-11 74.7 56 60.7
Hma1.2p1_0632F.1_g192420 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 7.6e-10 70.1 54 59.3
A02p21490 Brassica napus HOM05D021712 ORTHO05D021656 1.9e-08 65.5 68 48.5
A05p18420 Brassica napus HOM05D017138 ORTHO05D016749 2.7e-07 61.6 59 49.2
C07p05430 Brassica napus HOM05D003766 ORTHO05D016749 4.6e-07 60.8 48 56.2
BraA05t22403Z Brassica rapa HOM05D003766 ORTHO05D004607 3.0e-06 58.2 44 59.1
Glyma.15G140700 Glycine max HOM05D003766 ORTHO05D004607 3.0e-06 58.2 71 43.7
Oeu049536.1 Olea europaea HOM05D003766 ORTHO05D004607 3.0e-06 58.2 133 34.6
BcaC04g21445 Brassica carinata HOM05D000349 ORTHO05D001782 6.7e-06 57.0 64 46.9


User provided reference genes

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