Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G2260 Papaver somniferum HOM05D005895 ORTHO05D007916 0.0e+00 1172.9 592 100.0
PSO017G6602 Papaver somniferum HOM05D005895 ORTHO05D007916 0.0e+00 1159.8 592 98.6
TAR371G0306 Trochodendron aralioides HOM05D005895 ORTHO05D007916 6.1e-258 894.0 591 76.6
MBI10_g00734_MAGBIO Magnolia biondii HOM05D005895 ORTHO05D007916 7.7e-253 877.1 596 75.2
GSVIVG01004086001 Vitis vinifera HOM05D005895 ORTHO05D007916 9.4e-251 870.2 593 74.7
QL03p058522 Quercus lobata HOM05D005895 ORTHO05D007916 1.2e-250 869.8 593 74.9
CSS0018548 Camellia sinensis var. sinensis HOM05D005895 ORTHO05D007916 1.6e-250 869.4 593 74.5
Haze_12237 Corylus avellana HOM05D005895 ORTHO05D007916 1.8e-249 865.9 593 74.5
Cfa009199 Carpinus fangiana HOM05D005895 ORTHO05D007916 2.3e-249 865.5 593 74.5
Prupe.1G247400 Prunus persica HOM05D005895 ORTHO05D007916 2.3e-249 865.5 594 73.4
CiPaw.05G183400 Carya illinoinensis HOM05D005895 ORTHO05D007916 3.9e-249 864.8 590 73.6
CANSAT01G2589 Cannabis sativa HOM05D005895 ORTHO05D007916 2.0e-248 862.4 540 79.1
Ciclev10030909m.g Citrus clementina HOM05D005895 ORTHO05D007916 2.0e-248 862.4 592 74.5
TWI36G0590 Tripterygium wilfordii HOM05D005895 ORTHO05D007916 6.3e-247 857.4 594 73.7
COL.COLO4_24246 Corchorus olitorius HOM05D005895 ORTHO05D007916 2.4e-246 855.5 583 74.4
Actinidia27801 Actinidia chinensis HOM05D005895 ORTHO05D007916 4.1e-246 854.7 591 73.4
Atru.chr11.2133 Acer truncatum HOM05D005895 ORTHO05D007916 5.3e-246 854.4 595 73.4
Gohir.A04G136400 Gossypium hirsutum HOM05D005895 ORTHO05D007916 2.6e-245 852.0 548 76.3
MELO3C011963.2 Cucumis melo HOM05D005895 ORTHO05D007916 7.7e-245 850.5 592 73.5
Atru.chr11.2117 Acer truncatum HOM05D005895 ORTHO05D007916 1.0e-244 850.1 595 73.1
PGR119G2505 Punica granatum HOM05D005895 ORTHO05D007916 1.3e-244 849.7 593 71.8
Thecc.02G257400 Theobroma cacao HOM05D005895 ORTHO05D007916 2.2e-244 849.0 592 72.6
vmacro01130 Vaccinium macrocarpon HOM05D005895 ORTHO05D007916 3.8e-244 848.2 632 69.6
Aqoxy5G03807 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 5.0e-244 847.8 592 73.6
Gorai.012G172600 Gossypium raimondii HOM05D005895 ORTHO05D007916 8.5e-244 847.0 548 75.9
Potri.010G044900 Populus trichocarpa HOM05D005895 ORTHO05D007916 2.5e-243 845.5 594 72.2
Hund06020 Selenicereus undatus HOM05D005895 ORTHO05D007916 2.5e-243 845.5 600 71.5
RcHm_v2.0_Chr4g0433361 Rosa chinensis HOM05D005895 ORTHO05D007916 1.6e-242 842.8 595 72.8
CAN.G7.20 Capsicum annuum HOM05D005895 ORTHO05D007916 4.7e-242 841.3 545 76.5
Eucgr.H02516 Eucalyptus grandis HOM05D005895 ORTHO05D007916 3.0e-241 838.6 534 77.5
CsaV3_5G031240 Cucumis sativus L. HOM05D005895 ORTHO05D007916 3.9e-241 838.2 592 72.3
THA.LOC104822982 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 5.2e-241 837.8 594 72.2
AT1G70570 Arabidopsis thaliana HOM05D005895 ORTHO05D007916 1.5e-240 836.3 595 71.3
Sabra10G0023200 Salix brachista HOM05D005895 ORTHO05D007916 3.3e-240 835.1 563 74.1
MD13G1098000 Malus domestica HOM05D005895 ORTHO05D007916 4.4e-240 834.7 597 70.7
arahy.Tifrunner.gnm1.ann1.LQ91H7 Arachis hypogaea HOM05D005895 ORTHO05D007916 5.7e-240 834.3 595 70.4
Medtr8g069525 Medicago truncatula HOM05D005895 ORTHO05D007916 5.7e-240 834.3 551 75.1
TPR.G34672 Trifolium pratense HOM05D005895 ORTHO05D007916 5.7e-240 834.3 596 70.1
AL2G29960 Arabidopsis lyrata HOM05D005895 ORTHO05D007916 7.4e-240 833.9 539 76.1
FvH4_4g25910 Fragaria vesca HOM05D005895 ORTHO05D007916 1.7e-239 832.8 597 72.5
Glyma.08G283100 Glycine max HOM05D005895 ORTHO05D007916 2.8e-239 832.0 588 71.1
Sed0023548 Sechium edule HOM05D005895 ORTHO05D007916 3.7e-239 831.6 593 72.3
Lj6A811T72 Lonicera japonica HOM05D005895 ORTHO05D007916 4.8e-239 831.2 597 72.4
Solyc04g025540.3 Solanum lycopersicum HOM05D005895 ORTHO05D007916 6.3e-239 830.9 593 72.2
VMungo0251G0514 Vigna mungo HOM05D005895 ORTHO05D007916 1.1e-238 830.1 593 70.2
Cpa.g.sc33.4 Carica papaya HOM05D005895 ORTHO05D007916 1.8e-238 829.3 583 73.1
Sopen04g012770 Solanum pennellii HOM05D005895 ORTHO05D007916 1.8e-238 829.3 545 76.1
Sp5g25720 Schrenkiella parvula HOM05D005895 ORTHO05D007916 3.1e-238 828.6 539 76.1
Cc04_g11160 Coffea canephora HOM05D005895 ORTHO05D007916 4.1e-238 828.2 588 72.4
Aa31LG4G10380 Aethionema arabicum HOM05D005895 ORTHO05D007916 5.3e-238 827.8 596 71.1
Carub.0002s1729 Capsella rubella HOM05D005895 ORTHO05D007916 5.3e-238 827.8 598 71.1
AUR62024296 Chenopodium quinoa HOM05D005895 ORTHO05D007916 5.3e-238 827.8 586 71.5
MD16G1098900 Malus domestica HOM05D005895 ORTHO05D007916 5.3e-238 827.8 597 69.3
Migut.E00194 Erythranthe guttata HOM05D005895 ORTHO05D007916 7.0e-238 827.4 540 76.3
DCAR_007061 Daucus carota HOM05D005895 ORTHO05D007916 9.1e-238 827.0 579 72.0
Lj4g0008127 Lotus japonicus HOM05D005895 ORTHO05D007916 9.1e-238 827.0 594 70.7
A02p16660 Brassica napus HOM05D005895 ORTHO05D007916 2.0e-237 825.9 602 70.3
BraA02t06722Z Brassica rapa HOM05D005895 ORTHO05D007916 2.6e-237 825.5 597 70.5
Gohir.D04G179500 Gossypium hirsutum HOM05D005895 ORTHO05D007916 3.5e-237 825.1 531 76.8
AUR62005446 Chenopodium quinoa HOM05D005895 ORTHO05D007916 4.5e-237 824.7 586 71.2
FAN07G1086 Fragaria x ananassa HOM05D005895 ORTHO05D007916 7.7e-237 823.9 597 71.9
CARHR063780 Cardamine hirsuta HOM05D005895 ORTHO05D007916 1.0e-236 823.5 539 75.1
BcaB05g24593 Brassica carinata HOM05D005895 ORTHO05D007916 2.2e-236 822.4 599 70.5
FAN12G2739 Fragaria x ananassa HOM05D005895 ORTHO05D007916 2.9e-236 822.0 596 72.0
SalBow8G2958 Salvia bowleyana HOM05D005895 ORTHO05D007916 3.8e-236 821.6 593 71.5
FAN12G1268 Fragaria x ananassa HOM05D005895 ORTHO05D007916 8.5e-236 820.5 597 71.9
Thhalv10018314m.g Eutrema salsugineum HOM05D005895 ORTHO05D007916 3.2e-235 818.5 596 70.5
FAN17G0264 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.2e-234 816.6 629 68.4
Ah.03g133150 Amaranthus hybridus HOM05D005895 ORTHO05D007916 2.1e-234 815.8 602 69.9
Sc04g0009430 Simmondsia chinensis HOM05D005895 ORTHO05D007916 2.1e-234 815.8 578 72.3
C02p27920 Brassica napus HOM05D005895 ORTHO05D007916 2.7e-234 815.5 601 69.7
BolC2t08837H Brassica oleracea HOM05D005895 ORTHO05D007916 2.7e-234 815.5 601 69.7
EL10Ac6g13787 Beta vulgaris HOM05D005895 ORTHO05D007916 8.0e-234 813.9 616 68.5
Gorai.005G179700 Gossypium raimondii HOM05D005895 ORTHO05D007916 2.3e-233 812.4 593 70.0
ECA233G5390 Erigeron canadensis HOM05D005895 ORTHO05D007916 9.7e-232 807.0 564 72.2
Lalb_Chr05g0228401 Lupinus albus HOM05D005895 ORTHO05D007916 1.7e-231 806.2 533 74.5
BcaC03g15207 Brassica carinata HOM05D005895 ORTHO05D007916 1.4e-230 803.1 590 70.2
HanXRQChr08g0208071 Helianthus annuus HOM05D005895 ORTHO05D007916 1.7e-228 796.2 547 73.3
Aqoxy3G01161 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 6.1e-226 787.7 534 73.8
Nn4g22655 Nelumbo nucifera HOM05D005895 ORTHO05D007916 3.0e-225 785.4 593 69.0
Nitab4.5_0006332g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 5.7e-224 781.2 593 68.5
HPP92_003081 Vanilla planifolia HOM05D005895 ORTHO05D007916 1.1e-222 776.9 517 74.7
FAN22G0931 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.4e-222 776.5 631 66.7
Zm00001eb231230 Zea mays HOM05D005895 ORTHO05D007916 2.9e-220 768.8 595 67.4
Os02g0131200 Oryza sativa ssp. japonica HOM05D005895 ORTHO05D007916 4.2e-219 765.0 525 73.5
Gohir.D02G159600 Gossypium hirsutum HOM05D005895 ORTHO05D007916 8.0e-218 760.8 527 73.2
ATR0585G083 Amborella trichopoda HOM05D005895 ORTHO05D007916 1.3e-215 753.4 603 66.7
ClCG05G025660 Citrullus lanatus HOM05D005895 ORTHO05D007916 2.8e-215 752.3 577 68.6
Lsat_1_v5_gn_8_150700 Lactuca sativa HOM05D005895 ORTHO05D007916 2.7e-213 745.7 546 70.1
Nitab4.5_0000370g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 1.7e-212 743.0 593 65.9
Manes.12G024300 Manihot esculenta HOM05D005895 ORTHO05D007916 1.5e-211 740.0 528 71.6
Phvul.003G063900 Phaseolus vulgaris HOM05D005895 ORTHO05D007916 9.5e-211 737.3 458 77.1
MSTRG.2417 Avicennia marina HOM05D005895 ORTHO05D007916 6.4e-207 724.5 442 80.1
arahy.Tifrunner.gnm1.ann1.0I87EX Arachis hypogaea HOM05D005895 ORTHO05D007916 6.0e-205 718.0 524 68.7
Ca_22578_v3 Cicer arietinum L. HOM05D005895 ORTHO05D007916 1.0e-204 717.2 522 69.3
Psat0s3772g0040 Pisum sativum HOM05D005895 ORTHO05D007916 5.0e-204 714.9 525 68.6
Manes.13G025800 Manihot esculenta HOM05D005895 ORTHO05D007916 1.1e-203 713.8 488 74.0
Mapoly0129s0050 Marchantia polymorpha HOM05D005895 ORTHO05D007916 1.4e-193 680.2 536 63.8
THA.LOC104818151 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 5.2e-193 678.3 495 70.5
Oeu059911.1 Olea europaea HOM05D005895 ORTHO05D007916 2.4e-190 669.5 524 67.2
Sed0009772 Sechium edule HOM05D005895 ORTHO05D007916 4.6e-189 665.2 471 71.8
Duzib251G0200 Durio zibethinus HOM05D005895 ORTHO05D007916 2.5e-187 659.4 585 60.9
Zm00001eb209010 Zea mays HOM05D005895 ORTHO05D007916 3.3e-187 659.1 524 64.5
unitig_52.g17177 Utricularia gibba HOM05D005895 ORTHO05D007916 5.6e-187 658.3 547 63.8
Gohir.A03G136300 Gossypium hirsutum HOM05D005895 ORTHO05D007916 3.6e-186 655.6 495 66.9
Pp3c12_14340 Physcomitrium patens HOM05D005895 ORTHO05D007916 1.1e-185 654.1 576 59.7
Peaxi162Scf01242g00143 Petunia axillaris HOM05D005895 ORTHO05D007916 5.1e-172 608.6 386 78.0
SMO119G0060 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 1.5e-171 607.1 555 59.1
AagrBONN_evm.TU.Sc2ySwM_368.1304 Anthoceros agrestis HOM05D005895 ORTHO05D007916 5.1e-164 582.0 450 65.3
Dinv24803 Davidia involucrata HOM05D005895 ORTHO05D007916 2.9e-151 539.7 391 73.4
Pp3c10_19590 Physcomitrium patens HOM05D005895 ORTHO05D007916 5.2e-116 422.5 345 61.4
SHI17741 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-95 354.4 254 69.3
FAN18G3006 Fragaria x ananassa HOM05D005895 ORTHO05D007916 2.8e-85 320.5 200 77.5
CBR_g37586 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-60 238.8 274 48.5
CBR_g37584 Chara braunii HOM05D000019 ORTHO05D000048 2.3e-55 221.1 206 52.4
Peaxi162Scf02256g00001 Petunia axillaris HOM05D005895 ORTHO05D007916 5.3e-52 209.9 143 73.4
SEGI_05407 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 1.0e-47 195.7 141 69.5
SEGI_24305 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 4.3e-38 163.7 100 76.0
BcaB08g34808 Brassica carinata HOM05D005895 ORTHO05D007916 6.3e-37 159.8 100 74.0
SEGI_08481 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 9.0e-36 156.0 106 67.9
DCAR_028023 Daucus carota HOM05D005895 ORTHO05D007916 9.4e-25 119.4 65 87.7
Rhsim12G0041200 Rhododendron simsii HOM05D005895 ORTHO05D007916 1.4e-23 115.5 70 74.3
SMO163G0072 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 3.0e-23 114.4 177 41.8
Ah.07g201790 Amaranthus hybridus HOM05D005895 ORTHO05D007916 1.1e-22 112.5 66 77.3
BcaB05g24594 Brassica carinata HOM05D005895 ORTHO05D012801 1.8e-20 105.1 104 53.8
A02p16670 Brassica napus HOM05D005895 ORTHO05D012801 2.9e-18 97.8 65 72.3
BraA02t06723Z Brassica rapa HOM05D005895 ORTHO05D012801 2.9e-18 97.8 65 72.3
C02p27930 Brassica napus HOM05D005895 ORTHO05D012801 5.5e-17 93.6 67 68.7
BolC2t08838H Brassica oleracea HOM05D005895 ORTHO05D012801 5.5e-17 93.6 67 68.7
CSS0038190 Camellia sinensis var. sinensis HOM05D033929 ORTHO05D026310 1.8e-15 88.6 120 45.0
DCAR_029453 Daucus carota HOM05D005895 ORTHO05D007916 1.5e-14 85.5 67 64.2
Gorai.012G172500 Gossypium raimondii HOM05D005895 ORTHO05D007916 6.3e-13 80.1 56 66.1


User provided reference genes

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