Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 7.1e-293 1010.4 722 100.0
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 2.4e-288 995.3 722 98.8
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 4.0e-147 526.2 727 68.1
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 2.5e-144 516.9 713 59.3
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 1.0e-142 511.5 670 71.0
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 3.9e-142 509.6 723 59.2
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 3.9e-134 483.0 455 56.0
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 5.1e-134 482.6 724 55.4
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 2.2e-129 467.2 670 69.1
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 1.4e-128 464.5 450 62.2
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 1.9e-128 464.2 630 62.4
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 5.5e-128 462.6 682 67.4
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 9.4e-128 461.8 724 64.8
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 9.4e-128 461.8 682 67.4
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 4.7e-127 459.5 689 65.5
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 7.9e-127 458.8 446 54.3
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 1.4e-126 458.0 715 64.2
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 3.9e-126 456.4 686 65.2
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 6.7e-126 455.7 681 67.3
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 4.4e-125 453.0 722 65.1
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 7.4e-125 452.2 666 66.2
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 4.8e-124 449.5 693 64.8
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 1.4e-123 448.0 683 64.9
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 1.4e-123 448.0 667 65.5
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 3.1e-123 446.8 467 60.0
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 9.1e-123 445.3 451 61.0
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 3.5e-122 443.4 704 45.2
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 3.5e-122 443.4 704 45.2
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 4.5e-122 443.0 665 65.9
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 7.7e-122 442.2 685 63.6
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 8.5e-121 438.7 359 71.3
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 2.5e-120 437.2 672 65.0
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 5.5e-120 436.0 676 64.2
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 2.1e-119 434.1 687 57.9
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 1.0e-118 431.8 712 62.9
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 3.9e-118 429.9 448 59.2
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 3.9e-118 429.9 448 59.2
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 2.0e-117 427.6 714 62.7
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 3.3e-117 426.8 690 64.6
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 3.3e-117 426.8 681 63.1
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 4.4e-117 426.4 428 62.1
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 4.4e-117 426.4 655 62.1
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 7.4e-117 425.6 376 66.2
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 1.3e-116 424.9 445 60.2
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 1.3e-116 424.9 451 59.9
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 1.3e-116 424.9 443 59.4
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 8.2e-116 422.2 436 60.3
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 1.4e-115 421.4 469 58.0
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 2.4e-115 420.6 455 59.1
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 2.4e-115 420.6 673 63.2
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 4.1e-115 419.9 492 55.7
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 7.0e-115 419.1 457 56.2
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 7.0e-115 419.1 370 67.0
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 9.1e-115 418.7 383 66.1
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.6e-114 417.2 453 58.9
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 3.5e-114 416.8 677 62.9
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 4.5e-114 416.4 433 59.1
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 5.9e-114 416.0 431 60.3
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 1.0e-113 415.2 445 54.6
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 6.5e-113 412.5 390 63.6
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 1.9e-112 411.0 677 62.6
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 7.2e-112 409.1 431 59.4
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 9.4e-112 408.7 437 58.4
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 1.0e-110 405.2 354 64.1
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 1.8e-110 404.4 436 58.5
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 5.2e-110 402.9 617 66.3
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 6.8e-110 402.5 354 60.2
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 1.5e-109 401.4 669 57.8
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 5.7e-109 399.4 434 50.7
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 2.2e-108 397.5 377 63.7
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 2.2e-108 397.5 687 62.2
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 3.7e-108 396.7 599 65.6
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 3.1e-107 393.7 326 70.9
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 3.1e-107 393.7 401 60.8
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 7.0e-107 392.5 736 56.9
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 9.1e-107 392.1 687 60.4
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 1.6e-106 391.3 446 54.7
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 4.5e-106 389.8 553 71.1
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 1.3e-105 388.3 470 53.0
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 4.2e-104 383.3 541 73.6
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 7.2e-104 382.5 456 55.0
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 7.2e-104 382.5 498 50.8
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 1.6e-103 381.3 616 65.9
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 6.8e-102 375.9 350 62.9
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 2.0e-101 374.4 509 50.5
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 5.7e-101 372.9 318 70.1
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 7.5e-101 372.5 457 53.0
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 8.3e-100 369.0 560 68.8
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 3.1e-99 367.1 425 56.9
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 4.1e-99 366.7 369 61.2
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 4.1e-99 366.7 369 61.2
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 4.5e-98 363.2 600 58.2
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 1.0e-97 362.1 434 55.1
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 1.1e-96 358.6 369 60.2
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 3.3e-96 357.1 446 52.2
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 4.2e-96 356.7 370 60.0
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 1.2e-95 355.1 499 47.7
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 2.3e-94 350.9 370 59.2
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 9.8e-93 345.5 362 59.4
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 5.4e-91 339.7 345 57.7
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 2.0e-90 337.8 419 51.3
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 1.2e-71 275.4 372 43.0
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 3.1e-70 270.8 517 41.0
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 4.9e-68 263.5 189 63.0
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 4.6e-58 230.3 208 55.8
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 1.4e-54 218.8 288 44.1
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 9.3e-43 179.5 388 34.8
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 3.0e-41 174.5 366 40.2
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 1.6e-31 142.1 373 38.6
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 7.7e-21 106.7 215 46.5
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 7.9e-18 96.7 135 37.0
SalBow1G4926 Salvia bowleyana HOM05D006844 ORTHO05D008504 2.3e-17 95.1 74 63.5
BcaB01g05118 Brassica carinata HOM05D006844 ORTHO05D008504 4.3e-16 90.9 130 39.2
AUR62025550 Chenopodium quinoa HOM05D006844 ORTHO05D008504 3.4e-13 81.3 49 71.4


User provided reference genes

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