Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G1642 Papaver somniferum HOM05D002536 ORTHO05D008091 2.5e-168 595.5 326 100.0
PSO782G0049 Papaver somniferum HOM05D002536 ORTHO05D008091 2.5e-160 568.9 328 96.3
Aqoxy3G00142 Aquilegia oxysepala HOM05D002536 ORTHO05D008091 7.5e-109 397.9 327 67.0
TAR622G0880 Trochodendron aralioides HOM05D002536 ORTHO05D008091 3.7e-108 395.6 289 73.0
TWI53G1346 Tripterygium wilfordii HOM05D002536 ORTHO05D008091 1.2e-103 380.6 328 64.0
Potri.004G091600 Populus trichocarpa HOM05D002536 ORTHO05D008091 3.4e-101 372.5 329 61.7
Nn3g18195 Nelumbo nucifera HOM05D002536 ORTHO05D008091 1.3e-100 370.5 327 64.8
Sabra04G0061700 Salix brachista HOM05D002536 ORTHO05D008091 2.2e-100 369.8 328 61.3
Atru.chr1.1780 Acer truncatum HOM05D002536 ORTHO05D008091 3.7e-100 369.0 327 63.3
Atru.chr1.1783 Acer truncatum HOM05D002536 ORTHO05D008091 3.7e-100 369.0 327 63.3
Psat2g023480 Pisum sativum HOM05D002536 ORTHO05D008091 1.9e-99 366.7 315 62.5
Ah.10g037920 Amaranthus hybridus HOM05D002536 ORTHO05D008091 2.4e-99 366.3 328 62.8
Actinidia15922 Actinidia chinensis HOM05D002536 ORTHO05D008091 3.2e-99 365.9 330 63.0
Cfa007856 Carpinus fangiana HOM05D002536 ORTHO05D008091 3.2e-99 365.9 327 62.4
Eucgr.F02816 Eucalyptus grandis HOM05D002536 ORTHO05D008091 5.4e-99 365.2 273 69.6
Ca_06135_v3 Cicer arietinum L. HOM05D002536 ORTHO05D008091 7.0e-99 364.8 290 66.9
Rhsim10G0078900 Rhododendron simsii HOM05D002536 ORTHO05D008091 1.2e-98 364.0 270 71.9
COL.COLO4_16592 Corchorus olitorius HOM05D002536 ORTHO05D008091 1.6e-98 363.6 328 62.5
CANSAT78G0797 Cannabis sativa HOM05D002536 ORTHO05D008091 2.7e-98 362.8 327 62.1
MBI16_g05920_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D006290 2.7e-98 362.8 275 70.9
Lj2P435T31 Lonicera japonica HOM05D002536 ORTHO05D008091 4.6e-98 362.1 266 71.1
ClCG05G010840 Citrullus lanatus HOM05D002536 ORTHO05D008091 1.3e-97 360.5 274 73.4
TPR.G11790 Trifolium pratense HOM05D002536 ORTHO05D008091 1.7e-97 360.1 284 67.3
MELO3C020303.2 Cucumis melo HOM05D002536 ORTHO05D008091 3.0e-97 359.4 271 70.8
arahy.Tifrunner.gnm1.ann1.SZ684F Arachis hypogaea HOM05D002536 ORTHO05D008091 3.9e-97 359.0 286 66.4
LjContig00564g0008816 Lotus japonicus HOM05D002536 ORTHO05D008091 6.6e-97 358.2 286 66.4
Lalb_Chr03g0036071 Lupinus albus HOM05D002536 ORTHO05D008091 6.6e-97 358.2 270 69.3
FAN23G2237 Fragaria x ananassa HOM05D002536 ORTHO05D008091 1.1e-96 357.5 304 63.8
Sed0014940 Sechium edule HOM05D002536 ORTHO05D008091 1.5e-96 357.1 284 68.3
Haze_14213 Corylus avellana HOM05D002536 ORTHO05D008091 1.9e-96 356.7 319 62.4
Medtr5g087440 Medicago truncatula HOM05D002536 ORTHO05D008091 1.9e-96 356.7 269 68.8
arahy.Tifrunner.gnm1.ann1.NZLK2N Arachis hypogaea HOM05D002536 ORTHO05D008091 4.3e-96 355.5 270 68.9
Medtr5g086010 Medicago truncatula HOM05D002536 ORTHO05D008091 4.3e-96 355.5 270 68.5
CsaV3_3G017670 Cucumis sativus L. HOM05D002536 ORTHO05D008091 9.5e-96 354.4 273 70.0
AUR62023248 Chenopodium quinoa HOM05D002536 ORTHO05D008091 1.2e-95 354.0 268 70.1
Aa31LG11G12180 Aethionema arabicum HOM05D002536 ORTHO05D008091 2.1e-95 353.2 271 69.7
EL10Ac2g04494 Beta vulgaris HOM05D002536 ORTHO05D008091 2.1e-95 353.2 281 67.6
QL05p059601 Quercus lobata HOM05D002536 ORTHO05D008091 2.8e-95 352.8 329 61.4
Prupe.3G152500 Prunus persica HOM05D002536 ORTHO05D008091 8.1e-95 351.3 328 61.3
HanXRQChr11g0325231 Helianthus annuus HOM05D002536 ORTHO05D008091 1.1e-94 350.9 319 63.0
DCAR_008922 Daucus carota HOM05D000103 ORTHO05D008091 1.4e-94 350.5 289 66.8
QL05p059839 Quercus lobata HOM05D002536 ORTHO05D008091 1.8e-94 350.1 329 61.1
Gohir.D04G186100 Gossypium hirsutum HOM05D002536 ORTHO05D008091 6.8e-94 348.2 328 59.8
GSVIVG01030878001 Vitis vinifera HOM05D002536 ORTHO05D008091 6.8e-94 348.2 327 60.9
Duzib248G1146 Durio zibethinus HOM05D002536 ORTHO05D008091 2.0e-93 346.7 328 59.8
Gorai.012G182500 Gossypium raimondii HOM05D002536 ORTHO05D008091 2.0e-93 346.7 328 59.5
CiPaw.04G045700 Carya illinoinensis HOM05D002536 ORTHO05D008091 4.4e-93 345.5 327 61.2
Gohir.A04G142800 Gossypium hirsutum HOM05D002536 ORTHO05D008091 4.4e-93 345.5 328 59.8
Thecc.02G292900 Theobroma cacao HOM05D002536 ORTHO05D008091 9.9e-93 344.4 328 60.1
Cc07_g08230 Coffea canephora HOM05D002536 ORTHO05D008091 3.7e-92 342.4 335 58.2
MD09G1260700 Malus domestica HOM05D002536 ORTHO05D008091 3.7e-92 342.4 286 65.4
Lsat_1_v5_gn_4_154760 Lactuca sativa HOM05D002536 ORTHO05D008091 1.1e-91 340.9 319 61.1
Hund13690 Selenicereus undatus HOM05D002536 ORTHO05D008091 1.4e-91 340.5 270 67.4
GSVIVG01030879001 Vitis vinifera HOM05D002536 ORTHO05D008091 1.9e-91 340.1 268 68.3
Dinv19004 Davidia involucrata HOM05D002536 ORTHO05D008091 7.1e-91 338.2 329 59.3
ECA232G4028 Erigeron canadensis HOM05D002536 ORTHO05D008091 7.1e-91 338.2 268 67.5
QL05p058873 Quercus lobata HOM05D002536 ORTHO05D008091 9.2e-91 337.8 269 67.7
Sp6g26760 Schrenkiella parvula HOM05D002536 ORTHO05D008091 1.2e-90 337.4 276 65.6
FvH4_1g30050 Fragaria vesca HOM05D002536 ORTHO05D008091 4.6e-90 335.5 304 60.9
Cpa.g.sc116.19 Carica papaya HOM05D002536 ORTHO05D008091 1.7e-89 333.6 331 59.2
Thhalv10014009m.g Eutrema salsugineum HOM05D002536 ORTHO05D008091 3.9e-89 332.4 274 64.6
MSTRG.23612 Avicennia marina HOM05D002536 ORTHO05D008091 6.6e-89 331.6 328 57.3
Hma1.2p1_0283F.1_g113560 Hydrangea macrophylla HOM05D002536 ORTHO05D008091 8.6e-89 331.3 329 58.1
PGR004G1229 Punica granatum HOM05D002536 ORTHO05D008091 8.6e-89 331.3 272 65.8
Ciclev10012168m.g Citrus clementina HOM05D002536 ORTHO05D008091 1.5e-88 330.5 269 66.9
Phvul.004G133300 Phaseolus vulgaris HOM05D002536 ORTHO05D008091 1.9e-88 330.1 271 64.9
arahy.Tifrunner.gnm1.ann1.CBV847 Arachis hypogaea HOM05D002536 ORTHO05D008091 2.5e-88 329.7 271 63.5
BolC2t06821H Brassica oleracea HOM05D002536 ORTHO05D008091 2.5e-88 329.7 278 64.7
VMungo1309G0890 Vigna mungo HOM05D002536 ORTHO05D008091 2.5e-88 329.7 269 64.7
C02p09100 Brassica napus HOM05D002536 ORTHO05D008091 5.6e-88 328.6 285 63.9
Sopen02g035940 Solanum pennellii HOM05D002536 ORTHO05D008091 1.2e-87 327.4 270 65.6
FAN19G1396 Fragaria x ananassa HOM05D002536 ORTHO05D008091 1.6e-87 327.0 268 66.0
SalBow3G4287 Salvia bowleyana HOM05D002536 ORTHO05D008091 1.6e-87 327.0 328 56.4
Solyc02g091320.4 Solanum lycopersicum HOM05D002536 ORTHO05D008091 1.6e-87 327.0 270 65.6
CSS0023678 Camellia sinensis var. sinensis HOM05D002536 ORTHO05D006290 2.1e-87 326.6 289 64.4
Sc10g0000870 Simmondsia chinensis HOM05D002536 ORTHO05D008091 2.1e-87 326.6 331 57.4
arahy.Tifrunner.gnm1.ann1.YLI9AK Arachis hypogaea HOM05D002536 ORTHO05D008091 2.8e-87 326.2 245 68.6
Phvul.008G162400 Phaseolus vulgaris HOM05D002536 ORTHO05D008091 3.6e-87 325.9 270 64.1
RcHm_v2.0_Chr3g0492091 Rosa chinensis HOM05D002536 ORTHO05D008091 4.7e-87 325.5 270 66.3
A02p04220 Brassica napus HOM05D002536 ORTHO05D008091 8.1e-87 324.7 274 65.3
BraA02t05385Z Brassica rapa HOM05D002536 ORTHO05D008091 8.1e-87 324.7 274 65.3
Migut.H00262 Erythranthe guttata HOM05D002536 ORTHO05D008091 1.4e-86 323.9 271 63.5
FAN26G2179 Fragaria x ananassa HOM05D002536 ORTHO05D008091 8.9e-86 321.2 270 64.8
CAN.G625.80 Capsicum annuum HOM05D002536 ORTHO05D008091 2.0e-85 320.1 271 64.2
Manes.01G115200 Manihot esculenta HOM05D002536 ORTHO05D008091 2.0e-85 320.1 236 74.2
AL6G28530 Arabidopsis lyrata HOM05D002536 ORTHO05D008091 1.3e-84 317.4 283 64.0
Peaxi162Scf00803g00531 Petunia axillaris HOM05D002536 ORTHO05D008091 3.8e-84 315.8 317 57.1
Carub.0006s1568 Capsella rubella HOM05D002536 ORTHO05D008091 6.4e-84 315.1 270 67.0
CARHR195750 Cardamine hirsuta HOM05D002536 ORTHO05D008091 1.9e-83 313.5 272 65.4
Nitab4.5_0002456g0160 Nicotiana tabacum HOM05D002536 ORTHO05D008091 1.9e-83 313.5 271 63.1
PGSC0003DMG400030642 Solanum tuberosum HOM05D002536 ORTHO05D008091 3.2e-83 312.8 270 63.7
Nitab4.5_0002248g0020 Nicotiana tabacum HOM05D002536 ORTHO05D008091 5.4e-83 312.0 271 62.4
Oeu047422.1 Olea europaea HOM05D002536 ORTHO05D008091 7.8e-82 308.1 333 55.3
CDE07G0699 Ceratophyllum demersum HOM05D002536 ORTHO05D008091 9.6e-80 301.2 269 62.5
ATR0041G006 Amborella trichopoda HOM05D002536 ORTHO05D008091 1.2e-79 300.8 273 60.8
QL05p059463 Quercus lobata HOM05D002536 ORTHO05D008091 8.1e-79 298.1 269 61.7
Os01g0125700 Oryza sativa ssp. japonica HOM05D002536 ORTHO05D008091 2.2e-76 290.0 270 60.4
AT5G17460 Arabidopsis thaliana HOM05D002536 ORTHO05D008091 6.4e-76 288.5 236 66.5
BcaC03g13522 Brassica carinata HOM05D002536 ORTHO05D008091 3.0e-73 279.6 238 63.4
FAN28G0948 Fragaria x ananassa HOM05D002536 ORTHO05D008091 4.3e-72 275.8 270 57.0
AUR62023202 Chenopodium quinoa HOM05D002536 ORTHO05D008091 3.6e-71 272.7 213 67.1
SGA_v2.0_scaffold6G03262 Striga asiatica HOM05D002536 ORTHO05D008091 1.5e-69 267.3 334 45.5
Zm00001eb334950 Zea mays HOM05D002536 ORTHO05D008091 7.6e-69 265.0 170 78.8
SGA_v2.0_scaffold6G03263 Striga asiatica HOM05D002536 ORTHO05D008091 7.9e-66 255.0 332 44.9
SHI17045 Sapria himalayana HOM05D002536 ORTHO05D008091 1.8e-65 253.8 274 52.9
MBI16_g46274_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D008091 1.5e-64 250.8 159 79.2
Glyma.14G164000 Glycine max HOM05D002536 ORTHO05D008091 7.4e-64 248.4 270 54.1
SGA_v2.0_scaffold6G03266 Striga asiatica HOM05D002536 ORTHO05D008091 4.5e-61 239.2 241 53.1
SEGI_34238 Sequoiadendron giganteum HOM05D002536 ORTHO05D008091 4.9e-60 235.7 310 45.8
MD09G1260800 Malus domestica HOM05D002536 ORTHO05D008091 6.9e-54 215.3 188 62.8
unitig_899.g15351 Utricularia gibba HOM05D002536 ORTHO05D008091 9.0e-54 214.9 220 52.3
SGA_v2.0_scaffold6G03268 Striga asiatica HOM05D002536 ORTHO05D008091 3.8e-52 209.5 291 43.6
Glyma.13G079200 Glycine max HOM05D002536 ORTHO05D008091 2.2e-47 193.7 181 58.6
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 4.3e-40 169.5 149 61.1
MD09G1260900 Malus domestica HOM05D002536 ORTHO05D008091 1.6e-34 151.0 183 49.2
FAN28G0812 Fragaria x ananassa HOM05D002536 ORTHO05D008091 2.0e-29 134.0 268 36.9
A10p21940 Brassica napus HOM05D002536 ORTHO05D008091 7.0e-22 109.0 81 66.7
BcaC04g18790 Brassica carinata HOM05D002536 ORTHO05D008091 1.7e-20 104.4 72 73.6
BolC9t58807H Brassica oleracea HOM05D002536 ORTHO05D008091 8.5e-20 102.1 72 72.2
C09p59690 Brassica napus HOM05D002536 ORTHO05D008091 3.2e-19 100.1 72 72.2
HPP92_000766 Vanilla planifolia HOM05D002536 ORTHO05D008091 2.7e-18 97.1 119 47.9
BraA10t44252Z Brassica rapa HOM05D002536 ORTHO05D008091 5.2e-09 66.2 65 56.9
A10p21930 Brassica napus HOM05D002536 ORTHO05D008091 2.0e-08 64.3 65 56.9


User provided reference genes

Program Settings