Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 0.0e+00 1576.6 818 100.0
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 0.0e+00 1521.9 819 96.6
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 6.2e-285 984.2 829 64.5
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 5.1e-271 937.9 832 59.9
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 9.5e-270 933.7 830 61.0
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 5.4e-265 917.9 834 59.2
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 1.5e-262 909.8 831 59.6
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.2e-261 906.7 822 60.9
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 3.6e-261 905.2 832 59.4
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 1.2e-259 900.2 819 59.7
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 5.8e-259 897.9 833 58.3
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 7.6e-259 897.5 833 58.7
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 8.4e-258 894.0 821 58.3
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 2.3e-255 885.9 831 58.1
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 2.5e-254 882.5 803 59.5
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 2.8e-253 879.0 820 57.6
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 6.2e-253 877.9 820 57.6
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 1.5e-251 873.2 831 57.5
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 3.4e-251 872.1 835 57.5
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 2.2e-250 869.4 798 58.5
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 2.4e-249 865.9 837 57.5
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 3.2e-249 865.5 836 55.9
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 4.2e-249 865.1 804 57.5
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 2.1e-248 862.8 835 56.6
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.5e-246 856.7 823 57.5
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 2.1e-245 852.8 837 54.8
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 2.8e-245 852.4 823 56.3
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 2.8e-245 852.4 830 57.6
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 3.6e-245 852.0 837 54.7
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 6.2e-245 851.3 823 56.6
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 1.8e-244 849.7 830 57.6
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 2.4e-244 849.4 804 58.0
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 1.2e-243 847.0 815 55.3
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 1.5e-243 846.7 830 57.6
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 1.3e-242 843.6 827 56.6
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 5.5e-241 838.2 797 56.3
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 4.6e-240 835.1 814 54.5
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 8.7e-239 830.9 831 54.4
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 1.5e-238 830.1 832 53.6
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 7.4e-238 827.8 832 53.8
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 2.1e-237 826.2 832 53.5
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 2.8e-237 825.9 829 55.7
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 6.2e-237 824.7 832 53.6
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 7.6e-235 817.8 805 53.9
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 2.2e-234 816.2 817 54.6
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 1.6e-232 810.1 820 54.0
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 5.7e-230 801.6 832 52.6
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 1.1e-228 797.3 811 54.6
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 1.5e-227 793.5 800 55.4
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.3e-226 790.4 772 54.7
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 6.5e-226 788.1 822 52.7
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 1.2e-224 783.9 808 54.8
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 1.0e-223 780.8 834 52.3
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 8.7e-223 777.7 827 51.6
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 1.6e-221 773.5 834 52.4
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 4.8e-221 771.9 823 52.1
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 6.3e-221 771.5 827 52.6
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 7.7e-219 764.6 836 51.4
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 1.0e-218 764.2 832 52.6
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 1.7e-218 763.5 807 51.3
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 1.7e-218 763.5 834 52.2
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 2.2e-218 763.1 807 51.3
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 3.9e-215 752.3 797 52.6
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 5.7e-214 748.4 817 51.4
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 4.8e-213 745.3 828 51.1
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 1.2e-211 740.7 764 53.9
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 1.5e-206 723.8 826 49.0
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 2.0e-206 723.4 822 50.1
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 1.4e-204 717.2 824 50.2
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 1.2e-203 714.1 822 49.6
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 2.0e-203 713.4 825 49.9
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 4.5e-203 712.2 821 50.7
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 5.9e-203 711.8 832 50.1
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 2.9e-202 709.5 839 50.4
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 2.1e-200 703.4 750 52.4
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 2.7e-200 703.0 744 52.7
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 6.1e-200 701.8 822 49.3
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 4.0e-199 699.1 816 49.3
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 5.2e-199 698.7 817 50.2
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 1.2e-198 697.6 816 50.0
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 9.7e-198 694.5 825 48.8
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 1.7e-197 693.7 800 50.4
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 2.4e-196 689.9 806 50.4
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 2.0e-195 686.8 793 50.6
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 6.8e-191 671.8 744 52.8
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 8.8e-191 671.4 801 48.9
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 8.8e-191 671.4 827 46.1
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 5.4e-188 662.1 818 49.3
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 5.4e-188 662.1 828 46.1
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 9.8e-182 641.3 657 55.6
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 3.7e-181 639.4 810 45.2
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 6.8e-175 618.6 616 58.0
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 1.7e-173 614.0 611 55.2
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 7.8e-171 605.1 798 44.7
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 6.2e-152 542.3 559 56.7
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 1.9e-145 520.8 612 48.2
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 3.5e-139 500.0 808 40.0
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 6.0e-139 499.2 423 61.9
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.8e-130 471.1 489 53.6
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 3.2e-124 450.3 565 46.0
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 2.7e-123 447.2 780 42.1
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 7.6e-110 402.5 352 62.2
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 8.5e-109 399.1 518 44.8
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 8.8e-98 362.5 309 62.5
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 4.5e-94 350.1 879 30.0
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 2.1e-91 341.3 912 29.6
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 1.0e-90 339.0 286 61.5
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.3e-80 305.4 304 55.9
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 8.5e-77 292.7 224 66.1
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 8.8e-74 282.7 838 30.3
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.2e-73 282.3 492 40.9
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 9.5e-68 262.7 203 65.0
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 3.3e-60 237.7 258 48.1
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 4.4e-57 227.3 544 27.6
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 2.9e-56 224.6 559 33.3
CSS0037330 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 3.2e-47 194.5 226 49.6
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 7.0e-47 193.4 583 29.0
Lj8P252T34 Lonicera japonica HOM05D006581 ORTHO05D007870 3.5e-22 111.3 71 71.8
Sabra10G0190600 Salix brachista HOM05D006581 ORTHO05D007870 7.6e-17 93.6 161 42.2
CBR_g52136 Chara braunii HOM05D006581 ORTHO05D007870 8.4e-16 90.1 482 23.0


User provided reference genes

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